Epin007093.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- -
- Assembly
- GCA_947363495.1
- Location
- OX376157.1:3814477-3816300[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.9e-11 1.5e-08 34.8 0.0 3 40 20 58 18 61 0.88
Sequence Information
- Coding Sequence
- atgccacggatatatagaaggaaactgggctcccgcgagtaccgaaattactcagaatctaaattagaagaagcattaagtcaagtcgtggacggtaagctttcaattagaggggcatcagagcattttaatgtaccttatggaacattgtataataaatacaaaggaacgcatgtgaaaaagcctggcgcacagccggttttctcagaatctgaggaaaaagctttactgaaatcagccgcgaagtgttcagactggggttatcctttgactactctggatttaaggttcttcgctaaagcttttctggatagacaaggacgagtggcctctaaatttactaacaatcttcccggagttgagtgggcatattctcttctacgacgccataaagatgaatactctcaaagggtttcatctaatattaaaaaagctagggcgaatgtttctcatgagagtataaatgcttatttcgacaatcttacacctgttatcaaagatttgcctgcttctaatatattcaattacgatgagaccaacatgagtgatgacccaggaaaaaagcaaggtatttacaggcgaggggtgaaatatcccgaaaaagttatgaattttactaaaagtgccactacagtgatgatatgcggatccgctgatggtgttcttttgccgccttatgtaatctacaaaagtgttcatctatatgatacgtggaaagaagggggaccacgaggttcaccatgttgccaaaagacttgctgcttgcagggatctcgatttaataggaccagcagcggctggatagatagcgtgaccttccgtgattggtttcggacttctttcttgccgcacgccaaagcattgccaggtagaaaagttctgattggagacaatttgtcttcacatatggatgatgacgttcttaatgaatgtggaaaaaacaacattgattttgtgtgcctggttccacactcaacacatttatgtcagccattagatgtggccttcttcaggcctatgaaaagcgcttggcgaagcgtgttgactaactggaaaatgcaaaaccctcgcttatcaactattccaaaagatgcttttccacgcttgcttcaaaagGCACTAGAAAAAATTGATTTAGTCCAAGCCAAACCGAATCTACCTTTTTCAAAGGTCTCTGAAGGAGTGAAAAGAAATTTAATGAGTGCTTTTAAAGCCACTGGCATATTTCCCCTATCGAGAGAACAGGTGCTGAAAAGACTGCCCGCTGTAGAAAACAGTGACCCGACTAGTGAAGTTGAAAGTTGTTTAACCGAATATCTCAGAGAACAGCGTTACGGTGGTCAATCAGGAGGTCTTAGAAGAAGGACAAGACTAAATATTGAGCCAGGTGCTAGCGTTTCTACTAGCGCTAGTGCAGCTGACAAATACGCGTCTGGAGATGCTAATAACTTAAATGCTTTTAGCATGGATCAAGAAACCTTAGCTTCAAATAATGGTGATGAAGGCAGCGAGTCTGATAATCCAGTTTCAGAGGCACAAGAAGAATTAGAAGAGGGGAgatttgttttggcaaagttttattcacgtcgaggaaagaaaacttacaaatatgtttgtcgaattacctgcgtagaccccataatagtcgaaggttttaaatcaatgggaaataaaaaagacttcagatttgtacgcgatgatgtgtcagaaattgaagaGACTGATATTTTAAGCTATCTGCCGAGACCTAAAACAATAGCTGGAAAAGATAACGTTGAATGCGTTAAGTTTAACTTTGATATAAATATTTCAGAACTTCCTTAA
- Protein Sequence
- MPRIYRRKLGSREYRNYSESKLEEALSQVVDGKLSIRGASEHFNVPYGTLYNKYKGTHVKKPGAQPVFSESEEKALLKSAAKCSDWGYPLTTLDLRFFAKAFLDRQGRVASKFTNNLPGVEWAYSLLRRHKDEYSQRVSSNIKKARANVSHESINAYFDNLTPVIKDLPASNIFNYDETNMSDDPGKKQGIYRRGVKYPEKVMNFTKSATTVMICGSADGVLLPPYVIYKSVHLYDTWKEGGPRGSPCCQKTCCLQGSRFNRTSSGWIDSVTFRDWFRTSFLPHAKALPGRKVLIGDNLSSHMDDDVLNECGKNNIDFVCLVPHSTHLCQPLDVAFFRPMKSAWRSVLTNWKMQNPRLSTIPKDAFPRLLQKALEKIDLVQAKPNLPFSKVSEGVKRNLMSAFKATGIFPLSREQVLKRLPAVENSDPTSEVESCLTEYLREQRYGGQSGGLRRRTRLNIEPGASVSTSASAADKYASGDANNLNAFSMDQETLASNNGDEGSESDNPVSEAQEELEEGRFVLAKFYSRRGKKTYKYVCRITCVDPIIVEGFKSMGNKKDFRFVRDDVSEIEETDILSYLPRPKTIAGKDNVECVKFNFDINISELP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00651672;
- 90% Identity
- iTF_00720174;
- 80% Identity
- iTF_00720175;