Eelu048004.1
Basic Information
- Insect
- Ephestia elutella
- Gene Symbol
- -
- Assembly
- GCA_018467065.1
- Location
- JAEMBS010000782.1:8229-9989[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2e-10 2.1e-07 32.1 0.0 4 39 21 57 18 61 0.86
Sequence Information
- Coding Sequence
- ATGCCACGAATATATAAAAGGAAACTGGGCTCCCGTGAGTACCGAAATTACTCAGAATCTATATTAGAAGAAGCATTAAGTCAAGTCGTGGACGGTAAATTTTCGATTAGAGGGGCATCAGAACATTATAATGTACCTTATGGAACGCTGTATAACAAATACAAAGGAAAGCATGTAAAAAAACCTGGTGCACAGCCGGTGTTCTCTGAATCTGAGGAAAAAGCTTTACTGAAATCAGCCGCAAAGTGTTCAGACTGGGGCTATCCTCTAACTACTCTGGATTTAAGGTTCTTCGCAAAAGCTTTTCTGGACAGACAGGGGCGAGTGGCTTCTAAATTTACTGACAATCTTCCCGGAGTTGAGTGGGCATATTCTCTTCTACGACGCCATAAAGATGAATACTCTCAAAGGGTCTcatctaatattaaaaaagcTAGGGCAAATGTGTCACACGAGAGTATAAATGCTTATTTTGATAATCTTACACCTGTAATAGAAAAATTGCCTGCttctaatatatttaattttgatgagACAAATATGAGCGACGACCCTGGGAAAAAGCTAGGCATTTACAGGCGAGGGGTGAAATACCCCGAAAAAGTCATGAATTTTACTAAAAGTGCCACTACAGTTATGATATGCGGATCTGCTGATGGTGTTcttttgccgccctatgtaatCTATAAAAGTGTTCATCTATATGATACGTGGAAAGAAGGGGGACCACGAGGATCTCGATTTAATAGGACCAGCAGCGGCTGGATAGATAGCGTGACTTTCCGTGATTGGTTTCGGACTTCTTTCTTGCCGCACGCCAAAGCATTGCCAGGTAGGAAAGTTCTAATTGGAGACAATTTGTCTTCACATATGGATGATGACGTTCTTAATGAATGTGGAAAAAACAACATTGATTTTATTTGCCTAGTTCCACACTCAACTCATCTATGTCAGCCTTTAGATGTAGCCTTCTTCAGGCCTATGAAAAGCGCTTGGAGAAGCGTGTTGACAAACTGGAAAATGCAAAACCCTCGTTTATCAACAATTCCAAAAGATGCTTTTCCACGCTTGCTTCAAAAAGCCCTAGAAAAGATTGATTCAGTCCAAGCCAAACCGAATCaacatttctcaaatatctctGAAGGAGTGAAAAGAAATTTAATGAGTGCTTTTAAAGCAACCGGCATTTTTCCCCTATCGAGAGAACAGGTGCTGAAAAGACTGCCCGCCATAGAAAACACTGACCCGACTAATGAAGTTGAAAGTTGTTTAACCGACTATCTCAGAGAACAGCGTTACGGTGGTCAATCAGGTCTTAGAAAAAGGACAAGACTAAATATTGAGCCAGGTGCCAGCGTTTCTACTAGTGCTAGGGCAGTTGACACATTCGCGTCAGATGCCGATACTAATAACTTTGATGCTTCTAATATGGATCAAGAAAACTTAGCATTAAATAATCGTGAAGAGGCACAGCGTAATTTGGTCCCCATAGATGAAGGCAGCGAGTCTGATAATCCAGTGTCAGAGGCACAAGAAGAATTAGAATTAGGGAGATTTGTTTTGGCAAAGTTTTATTCGCGTCGAGGAAAGAAAACATACAAATATGTTTGTCGAATTACCTGTGTGGACCCCATAGTAGTCGAAGGTTTTAAATCAATGGGCAATAAAAGGAGTTCAGACTTGTACGCGATGATGTGTCAGAGATTGAAGAAACTGATATTTTAA
- Protein Sequence
- MPRIYKRKLGSREYRNYSESILEEALSQVVDGKFSIRGASEHYNVPYGTLYNKYKGKHVKKPGAQPVFSESEEKALLKSAAKCSDWGYPLTTLDLRFFAKAFLDRQGRVASKFTDNLPGVEWAYSLLRRHKDEYSQRVSSNIKKARANVSHESINAYFDNLTPVIEKLPASNIFNFDETNMSDDPGKKLGIYRRGVKYPEKVMNFTKSATTVMICGSADGVLLPPYVIYKSVHLYDTWKEGGPRGSRFNRTSSGWIDSVTFRDWFRTSFLPHAKALPGRKVLIGDNLSSHMDDDVLNECGKNNIDFICLVPHSTHLCQPLDVAFFRPMKSAWRSVLTNWKMQNPRLSTIPKDAFPRLLQKALEKIDSVQAKPNQHFSNISEGVKRNLMSAFKATGIFPLSREQVLKRLPAIENTDPTNEVESCLTDYLREQRYGGQSGLRKRTRLNIEPGASVSTSARAVDTFASDADTNNFDASNMDQENLALNNREEAQRNLVPIDEGSESDNPVSEAQEELELGRFVLAKFYSRRGKKTYKYVCRITCVDPIVVEGFKSMGNKRSSDLYAMMCQRLKKLIF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00720175; iTF_00720171; iTF_00720172; iTF_00720173; iTF_00720174; iTF_00651675; iTF_00651673; iTF_00651674; iTF_00827898;
- 90% Identity
- iTF_00720174;
- 80% Identity
- -