Epin012504.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euzophera pinguis
Gene Symbol
clz9
Assembly
GCA_947363495.1
Location
OX376159.1:4067697-4070335[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.8e-11 9.5e-09 35.4 0.0 3 36 27 60 26 67 0.92

Sequence Information

Coding Sequence
ATGGTGCGAACATACACTAGAAAATATTCAAATATAAGAAATGGAAAGTCACATTTACCGTATCAGAACTACCAACTGGAAAACTTACAAGCCGCTATCAATAGTGTAAAAGAAGGAAGAATGAGTCTTACAGATGCAGCGAGTACGTACGGTGTGCCAAAGAGTACCCTGAGTAGAAAAACTAGGAATATCAACTGCACGCAAGAGAAGGCTGGTCATCCGACCTTATTTTCACCTGAAGAGGAGAGAATTTTCGTTAAATTTATTTTAGTAGTAGGCGAGTGGCGCTTTCCATTTAATTCAACTGAACTCCGTATTTTTGCCCAGAAATACCTTAATAAGATTGGTAAAAAAGTATATGGGCTTAGAGACAATATGCCCGGGGTGGATTGGGCCCGTAATTTTCTTTTAAGATATAAGTCACAAATTTCAAATCGCAAATCTGCAAATATTTCTAGTGATCGAGCAAGATTTACGCCACAAGATTTAGATGCCTTTTTTGAAAATTATGCAAAAATAGTTGAAGGGGTTGCTGAAGATTGTATAATCAACTATGATGAGACGAATTTGACGGATGACCCTGGAAACAAAAATTATATTTATAAAAGAGGGTGCAAATATCCAGAGCGAATCTTTAACACCTCAAAAACGGCAATTTCACTTATGTTTTCTGGCACTGCATCAGGGCATCTGTTACCTATGTACGTTGTTTATAAATCCGAAAATTTATGGGACACATGGATGGAGGCAGGGCCAGAGGGCACAAGATATAATCGCTCAAAAAGTGGGTGGTTCGATTCTGTTTGCTTTGAAGACTGGTTTAATACTATTATTGTCCCATATGTGCGAAATAAGTCCGGTCCAAAGGTGTTAATTGGTGATAATTTATCATCGCACTTTTCAGAAAGCGTGTTAAAGACTTGTGAAGAATTAAATATTGCATTTGTGTGCCTACCACCTAAAACAACTCATCTACTTCAACCCTTGGACGTCGCGTTTTTCGCCCCATTGAAGGCTTATTGGAGAGACGTTCTCACTAAATGGAAACTGACTGAGGGAAGAAAACATAAAACATTAATAAAAAGTGCATTTCCTAAACTATTATGTAAATTAAAAAACAAACTAATTGAAAATGATGCCGAATCTATCAATTTAAAAGCTGGTTTCAATAAGTCCGGACTGTACCCTGTTGATCCTAATCGACCTAAATCTAGATTACCTCAATCCCAGACATCCAATTCTGAAACAGAAATAGAGAGTACTGCGTCTTCAGTAATACGCGAAATCTTAATGGATATGAGATGTCCTGAGGTTCCAGAGGGAGTAAGGAGGAAAAAAGATTTGTTGTTGAACCGGGTAGTATTAGATCCGATTGACCCCGTTCCCGGTCCTTCTGGACTACATCACACAAACAACATATTAGAAACTTATGACAGTGACACTTCCAAATCTTCGTATGAACAAAGTACTCATACTGTAATGCCTGTATTAAGGCAAACAAAAGACTACAATGGTAAGGGTAAAGGAATCGGAAAGAAAACGAAACCTTGTGAAACATTGATTAATAAGAAAAAACAAAGTGAGAATTCAATAGAAATATATGAGGATGATATAGGTGTGCCAGTGCAAGAAAGTGACAATCCTGGTGAAGAAAATCTGGTCTTTTTGTCAAACCTTTCCAAAACAGATGAACAGAATCAATCTTTTGCTACCAATCAGACTTTACCAAAATGCTTACAATCCAGTCATGATAATCAACCTACAAAAGAAACTCAAAAAATAAATATCATTTCCGATGAAAAAATCAGCTTTGAAGAACTTTTACTTAACAGGGTATGCCAGGATAAGAAGGAAAATACTACGGCAAAAAAGAAGCGGGTGGCTAAAGGAGCTGAAGTTATTACTGCATCTACAAGTAAAATAAAAGAAAAATCTTTCGGAATTACCCGAAAAGACCTTATCAATACTACCATAACTAAAATTTCGAATAAAAAACGGGTAAGAAAATCAAAGGGTTCATTTACAAGCAATTCAGATTGTGATATTATGAGTACCCACAGTGACTCTGATATATGCGAGTATGCTACCGACGCCACCATAGAGGCTGATGATTTTTTTTTTGTTGCCAACTCAATTTCAAAGGCTGATGAAACATATTTAACTGGCAATAAGACTGATATAGATAATGCAACTAAAGAGACTGACTTAGAGAATAATACTGAAAAAGTAGTTTTAAGTGAAATAACAAATATAAGAGAAAACTATAGAGATAACAATGAAGACGAGTTGTTTTTAGATCAACAAAATGAAGATCCTTCATATTGCATTAATGATTTTGTTTTGGTGCGTTACCTTAGTAGAAAAAATTGGACATATTATGTTGGTATTGTTCAAGAAATTACCAAGGACATTAACGGGCAACACAAATATACAATACTCTTTTACAAAACTGTAAAAAAACCTGTTCTGTTATTTCGGAGGACAAGATTAATTGATCGTGATATAGTTCACAATGTTTCTATTGTAAAACAAATTTCATTATAA
Protein Sequence
MVRTYTRKYSNIRNGKSHLPYQNYQLENLQAAINSVKEGRMSLTDAASTYGVPKSTLSRKTRNINCTQEKAGHPTLFSPEEERIFVKFILVVGEWRFPFNSTELRIFAQKYLNKIGKKVYGLRDNMPGVDWARNFLLRYKSQISNRKSANISSDRARFTPQDLDAFFENYAKIVEGVAEDCIINYDETNLTDDPGNKNYIYKRGCKYPERIFNTSKTAISLMFSGTASGHLLPMYVVYKSENLWDTWMEAGPEGTRYNRSKSGWFDSVCFEDWFNTIIVPYVRNKSGPKVLIGDNLSSHFSESVLKTCEELNIAFVCLPPKTTHLLQPLDVAFFAPLKAYWRDVLTKWKLTEGRKHKTLIKSAFPKLLCKLKNKLIENDAESINLKAGFNKSGLYPVDPNRPKSRLPQSQTSNSETEIESTASSVIREILMDMRCPEVPEGVRRKKDLLLNRVVLDPIDPVPGPSGLHHTNNILETYDSDTSKSSYEQSTHTVMPVLRQTKDYNGKGKGIGKKTKPCETLINKKKQSENSIEIYEDDIGVPVQESDNPGEENLVFLSNLSKTDEQNQSFATNQTLPKCLQSSHDNQPTKETQKINIISDEKISFEELLLNRVCQDKKENTTAKKKRVAKGAEVITASTSKIKEKSFGITRKDLINTTITKISNKKRVRKSKGSFTSNSDCDIMSTHSDSDICEYATDATIEADDFFFVANSISKADETYLTGNKTDIDNATKETDLENNTEKVVLSEITNIRENYRDNNEDELFLDQQNEDPSYCINDFVLVRYLSRKNWTYYVGIVQEITKDINGQHKYTILFYKTVKKPVLLFRRTRLIDRDIVHNVSIVKQISL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00640209;
90% Identity
iTF_00640209;
80% Identity
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