Basic Information

Insect: Elegia similella
Gene Symbol: clz9
Assembly: GCA_947532085.1
Location: OX383926.1:8688922-8691654[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-12 1.9e-09 37.9 0.0 2 36 26 60 25 67 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-12	1.9e-09	37.9	0.0	2	36	26	60	25	67	0.92

Sequence Information

Coding Sequence: ATGGTGCGAACATACACTAGAAAATATTCAAATATAAGAAATGGAAAGTCACATCTACCGTATCAGAACTACCAACCGGAAAACTTACAAGCCGCCATTAATAGTGTAAAAGAAGGAAGAATGAGTCTTACGGATGCAGCGAGTACGTACGGTGTGCCAAAGAGTACCCTGAGTAGGAAAACTAGGAATATCAACTGCACGCAAGAGAAGGCTGGTCATCCGACCTTATTTTCACCTGAAGAGGAGAGAATTTTCGTTAAATTTATTTTAGTAGTAGGCGAGTGGGGCTTTCCATTTGATTCAACTGATCTCCGTATTTTTGCCCAGAAATACCTTAATAAGATTGGTAAAAAAGTATATGGGCTTAGAGACAATATGCCCGGGGTGGATTGGGCCCGTAATTTTCTTTTAAGATATAAGTCACAAATTTCAAATCGCAAATCTGCAAATATTTCTAGTGATCGAGCAAGATTTACGCCACAAGATTTAGATGCTTTTTTTGAAAATTATGCAAAAATAGTTGAAGGGGTTGCTGAAGATTGTATAATTAACTATGATGAGACGAATTTGACGGATGACCCTGGAAACAAAAATTATATTTATAAAAGAGGGTGCAAATATCCAGAGCGGATCTTTAACACCTCAAAAACGGCAATTTCACTTATGTTTTCTGGCACTGCATCAGGGCATCTGTTACCTATGTACGTTGTTTATAAATCCGAAAATCTATGGGACACATGGATGGAGGCAGGACCAGAGGGCACCAGATATAATCGCTCAAAAAGTGGGTGGTTCGATTCTGTATGCTTTGAAGACTGGTTTTATACTATTATTGTCCCATATGTGCGAAATAAGTCCGGTCCAAAGGTTTTAATTGGTGATAATTTATCATCGCACTTTTCAGAAAGCGTGTTAAAGACTTGTGAAGAATTAAATATTGCATTTGTGTGCCTACCACCTAAAACAACTCATCTACTTCAACCCTTGGACGTCGCGTTTTTCGCCCCATTGAAGGCTTATTGGAGAGACGTTCTCACTAAATGGAAACTGACTGAGGGAAGAAAACATAAAACATTAATAAAAAGTGCATTTCCTAAACTATTATGTAAATTAAAAAACAAACTAATTGAAAATGATGCCGAATCTATCAATTTAAAAGCTGGTTTCGATAAGTCCGGACTGTATCCTGTTGATCCTAATCGACCTAAATCTAGATTGCCTCAATCCCAGACATCCAATTCTGAAACAGATATAGAGAGTACTGCGTCTTCGGTGATACGCGATATCTTAATGGATATGAGATGTCCTGAGGTTCCAGAGGGAGTAAGGAGGAAAAAAAGATTAGTTGTTGAACCGGGTAAGAGCGTAACTGCAGAAGATTTAGTCAAATGTCAGCCAAAAAAAGACTCTAGAACAAAGCGGTCGGGAAAAAAGAATAAGTCTACTTCCAAAGTAGTATTAGATCCAATTGACCCCGTTCCCGGTCCTTCTGGACTACACCACACAAACAACATAGAAACTTATGACAGTGACACTTCCAAATCTTCGTATGAACAAAGTATTCATACTGTAATGCCTGTATTAAGGCAAACAAAAGACTACATTGGTAAGGGTAAAGGAATCGGAAAGAAAACGAAACCTTGTGAAACATTAGAAATATATGAGGATGATATAGGTGTGCCAGTGCAAGAAAGTGACAATCCTGGTGAAGAAAATCTGGTCTTTTTGTCAAACCTTTCCAAAACAGATGAACAGAATCAATCTTTTGCTACCAATCAGACTTTACCAAAATGCTTACAATCCAGTCATGATAATCAACCTACAAAAAGAACTCAAAAAATAAATATCATTTCCAATGAAAAAATCAGCTTTGAAGAACTTTTACTTAAAAGAGTATGCCAGGATAAGAAGGAAAATACTACGGCAAAAAAGAAGCGGGTGGCTAAAGGAGCTGAAGTTATTACTGCAAAGAAGGAAAATACTACGGCAAAAAAGAAGCAGGTGGCTAAAGGAGCTGAAGTTATTACTGCATCTACAAGTAAAATAAAAGAAAAATCTTTCGGAATTACCCAAAAAGACCTTATCAATACTGCCAAAACTAAAATTGCGAATAAAAAACGCGTAAGAAAATCAAAGGATTCATTTACAAGCAATTCAGATTGTGATATTATGAGTACCCACAGTGACTCTGATATATGCGAGTATGCTACCGACGCCACCATAGAGGCTGATGACTTTTTTTTTGTTGCCAACTCAATTTCAAAGGCTGATGAAACATATTTAACTGGTAATAAGACTGATATAGATAATGCAACTAAAGAGACTGACTTAGAGAATAATACTGAAAAAGTAGTTTTAAGTGAAATAACAAATATAAGAGAAAACTATAGAGATAACAATGAAGAAGAGATGTATTTAGATCAACCAAATGAAGATCCTTCATATTGCATTAATGATTTTGTTTTGGTGCGTTACCTTAGTAGAAAAAAATGGACATATTATGTTGGTATTGTTCAAGAAATTACTAAGGACATTAATGGGCAACACAAATATACAATACTCTTTTACAAAACTGTAAAAAAACCTATTCTGTTATTTCGCAAGACAAGATTAATTGATCGTGATATAGTTGACAATGTTTCTATTGTAAAACAAATTTCATTAAAAGAATCGCCAAACAATTGTAATGACCTATTGCTTGCTGAAGAATATGATATGATATATTTTAGTTAA
Protein Sequence: MVRTYTRKYSNIRNGKSHLPYQNYQPENLQAAINSVKEGRMSLTDAASTYGVPKSTLSRKTRNINCTQEKAGHPTLFSPEEERIFVKFILVVGEWGFPFDSTDLRIFAQKYLNKIGKKVYGLRDNMPGVDWARNFLLRYKSQISNRKSANISSDRARFTPQDLDAFFENYAKIVEGVAEDCIINYDETNLTDDPGNKNYIYKRGCKYPERIFNTSKTAISLMFSGTASGHLLPMYVVYKSENLWDTWMEAGPEGTRYNRSKSGWFDSVCFEDWFYTIIVPYVRNKSGPKVLIGDNLSSHFSESVLKTCEELNIAFVCLPPKTTHLLQPLDVAFFAPLKAYWRDVLTKWKLTEGRKHKTLIKSAFPKLLCKLKNKLIENDAESINLKAGFDKSGLYPVDPNRPKSRLPQSQTSNSETDIESTASSVIRDILMDMRCPEVPEGVRRKKRLVVEPGKSVTAEDLVKCQPKKDSRTKRSGKKNKSTSKVVLDPIDPVPGPSGLHHTNNIETYDSDTSKSSYEQSIHTVMPVLRQTKDYIGKGKGIGKKTKPCETLEIYEDDIGVPVQESDNPGEENLVFLSNLSKTDEQNQSFATNQTLPKCLQSSHDNQPTKRTQKINIISNEKISFEELLLKRVCQDKKENTTAKKKRVAKGAEVITAKKENTTAKKKQVAKGAEVITASTSKIKEKSFGITQKDLINTAKTKIANKKRVRKSKDSFTSNSDCDIMSTHSDSDICEYATDATIEADDFFFVANSISKADETYLTGNKTDIDNATKETDLENNTEKVVLSEITNIRENYRDNNEEEMYLDQPNEDPSYCINDFVLVRYLSRKKWTYYVGIVQEITKDINGQHKYTILFYKTVKKPILLFRKTRLIDRDIVDNVSIVKQISLKESPNNCNDLLLAEEYDMIYFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00640208; iTF_00924531; iTF_00720168; iTF_00720152; iTF_00358461;
90% Identity: iTF_00640208; iTF_00924531; iTF_00720168; iTF_00720152;
80% Identity: -