Epin004417.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- TFDP1
- Assembly
- GCA_947363495.1
- Location
- OX376156.1:9497031-9506540[+]
Transcription Factor Domain
- TF Family
- E2F
- Domain
- E2F_TDP domain
- PFAM
- PF02319
- TF Group
- Helix-turn-helix
- Description
- This family contains the transcription factor E2F and its dimerisation partners TDP1 and TDP2, which stimulate E2F-dependent transcription. E2F binds to DNA as a homodimer or as a heterodimer in association with TDP1/2, the heterodimer having increased binding efficiency. The crystal structure of an E2F4-DP2-DNA complex shows that the DNA-binding domains of the E2F and DP proteins both have a fold related to the winged-helix DNA-binding motif. Recognition of the central c/gGCGCg/c sequence of the consensus DNA-binding site is symmetric, and amino acids that contact these bases are conserved among all known E2F and DP proteins.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-23 2.1e-19 69.6 0.0 2 65 178 257 177 257 0.97 2 2 0.65 4.6e+03 -1.9 0.0 39 52 355 368 327 369 0.80
Sequence Information
- Coding Sequence
- ATGTCTCAGAACAGTAGTTCCGTAAATTTTTTAATACATGACGCCAATGGACAGCCTCAGATGGTTAAAGTAGTACAAAATACCAGTAATCAACCTATTGCTCAAATTAAACTAAGAGGCAACCCACCACTGAAATTGATTAAAATTCCAACATCAGAAGGGAATACACAGACAGTCTATCGGACAATCAAGTTGAATGATCTTAAATGTTCAACAAAGTTAGTGCAGGTGCCTAATAAAACCTTGTCACAGATTCCAAAAGTAACACCCAAGAAGGAACTGGTTGAAATTGAAATTGAAGGGGGCGCACAAGAAGACGTGAAACCAAATCTAGCAGAACTAAAATATATTCACACAGTACCAGACCTTGTATCAATTCCAAAATCACCGTCACCGATAGCAGACGGTGCCTTATTAAACAAGAGGGATATAACGTCCAACATGTCACATGCTTCAAGACGGAGACATGATTCCGATAATGACACACCAGCTGAATATACAACAAAGAGGAGGAAACATGCAGATAAAGTTGGAAAAGGGTTGAGACATTTCTCAATGAAAGTTTGTGAAAAAGTTAGAACCAAGGGCTTTACTTCATATAATGAGGTTGCAGACGAATTAGTGTTAGAATTTGCAGCTGGTATGCATGGTTCTGCAGATAGTCAGCAATATGACCAAAAGAACATCAGACGAAGAGTTTATGATGCACTGAATGTTTTAATGGCAATGAATATAATCTCCAAGGAGAAAAAAGAAATTCGGTGGCTCGGTCTGCCAACCAATTCAGTACAAGAGTGTACATCTCTGGAAAAGGAAAAGCAATCAAAACTAGAGCAGATACAAAAGAAAACTCAACAGTTACAAGAACTTATTTTACAGCATATATCATTCAAAAGTTTGATTCAAAGAAATAAAGACGCAGAAAATAAGGGTGTGAAACCATCGCCATCGTCAGCAATACATCTGCCATTTATCGTAGTTAACACTAGTGACAAAGCTTTGATTGACTGTAGTATTTCTAATGATAAGACAGAATATATGTTCAACTTTAACAAGAAATTTCAAATCTATGACGATATAGACATTTTAAAGAGGATGGGCCTTCTATTTGGTATGTATTTTGTTTATTTAATATTTATTGTACCCACAGAGTATGCCACATACAAATCTGTAAAGCACGATAGGCGGACTTAA
- Protein Sequence
- MSQNSSSVNFLIHDANGQPQMVKVVQNTSNQPIAQIKLRGNPPLKLIKIPTSEGNTQTVYRTIKLNDLKCSTKLVQVPNKTLSQIPKVTPKKELVEIEIEGGAQEDVKPNLAELKYIHTVPDLVSIPKSPSPIADGALLNKRDITSNMSHASRRRHDSDNDTPAEYTTKRRKHADKVGKGLRHFSMKVCEKVRTKGFTSYNEVADELVLEFAAGMHGSADSQQYDQKNIRRRVYDALNVLMAMNIISKEKKEIRWLGLPTNSVQECTSLEKEKQSKLEQIQKKTQQLQELILQHISFKSLIQRNKDAENKGVKPSPSSAIHLPFIVVNTSDKALIDCSISNDKTEYMFNFNKKFQIYDDIDILKRMGLLFGMYFVYLIFIVPTEYATYKSVKHDRRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00072515; iTF_00640075; iTF_01302083; iTF_00146191; iTF_01220449; iTF_00011735; iTF_00651524; iTF_00012728; iTF_00832697;
- 90% Identity
- iTF_00146191;
- 80% Identity
- -