Esal004990.1
Basic Information
- Insect
- Euura saliciscinereae
- Gene Symbol
- Prdm15
- Assembly
- GCA_018420115.1
- Location
- JAFFZH010012665.1:33093-37032[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.4 1.6e+02 3.7 0.4 2 23 240 261 239 261 0.94 2 14 0.0029 0.33 12.1 2.8 2 23 269 291 268 291 0.95 3 14 1.8e-05 0.002 19.0 0.7 2 23 451 472 450 472 0.97 4 14 0.016 1.7 9.8 0.5 1 20 476 495 476 497 0.94 5 14 6.4e-06 0.00071 20.5 1.9 1 23 505 527 505 527 0.98 6 14 0.029 3.2 9.0 2.7 3 20 533 550 532 552 0.92 7 14 0.0011 0.13 13.4 8.6 1 23 556 578 556 578 0.97 8 14 0.00011 0.012 16.6 0.2 3 23 599 619 597 619 0.96 9 14 0.0099 1.1 10.4 0.8 1 23 624 646 624 646 0.96 10 14 0.00038 0.042 14.9 0.2 2 23 652 673 651 673 0.96 11 14 0.00025 0.027 15.5 5.9 1 23 678 701 678 701 0.96 12 14 0.0011 0.13 13.4 3.9 1 23 707 729 707 729 0.97 13 14 0.0011 0.12 13.5 3.6 1 23 735 758 735 758 0.96 14 14 0.23 26 6.1 5.0 1 23 763 786 763 786 0.95
Sequence Information
- Coding Sequence
- ATGAGTTTACCTGTTGCCGAACGGAAAGACGTGAACCAAGTGAACGAAGTCAGCTTGTCAGCCTGCAGCGTCTGCGGTCAGCCACACGATACGACAACCTGCCCATTTCTCCTGGACCTGAATCATGTCAAGGACACTCCGGTTTTGTCGCGGGCGAGACAGACGGTACCTGCCGATCTCGAGGTGGCCAGGATGGCCGACGGGTCTACGACCGTCGTCGCCAGAGTCGAACTTCCGAGAGGGACGACCTTCGGACCGCTTTATGCAAAGAGAATATGGACCATGAATCCACTCACTCATTTTCCGATAAGAGTTTTCGGAAATACTCAGGCGGAAACTTACCACCTTGATTATTCAAACGAGAATAATTCAAACTGGATGTGCTTCGTTGAGCCGGCGTCGAACGCAAAGGAACAGAATCTTATCTGCTACCAGGTCAAACAGGACATCTTCTACACGGCTATGAGGACGATATCCGTCGGCGAAGAGCTGCGGGTCTGGTACGCCCCTTATTACGCTCTGAAAATGAAGATGCCTCTGTTCAACGTTGACTTTGCTAACGCCAGCGCGACTATTCCGGAGCCTGAAATTCAACAGATTATAAAAACGGAGTCCGGAAAGGATCAGATGGGAATATTAAATAAAGACGTGGCTCAAGAACTCGCGGAGAAATTACCCGCCCAACGTCTCGGAGCCAGAGACGATAAGGCGACTTGGAACTGTAGGATATGTTCAACGGTGATATGCTCTGTGGTTTCCTATGCCAAACATCTGATGGAACACTACAAGCCGTTGATCGGTGTTTATTGCAACATTTGTAACAAAAAATGTAACAATGTTACGGCTTTGGAGAGGCACAAGAATTCCAAGCACCCGAAATCGTCCTCCAACGACGGTATACCGACGTCCGAAAGCCAGCAGCAGCAGAACGCACAGACCGTATTTTTGAACATAAGCGATTCTGGGGGACAGACGTCGGACGCGATGAAAGATATCCTGGAAAAGTTCAAAGCAGGCAAAGCGATAACCGAGAGTAGCTTGCTCTCGAGTTCCTCGGTCAGCGAGAAGGGGAATCATTCGGATTTGCCTCTGCTGGATACGAATTCCATCAACGTTAACGACCTGCTGCATAATAACGGCGGATCTTTGATAGAGAATTCGTCGCTGAAATCGATCCTCGAGAATCATTGTCTCAATATGAACCTGGGTCTCGGTTCTATGACGGATTCTATACTCTCTGAAAATATATCAGCCACAGATTCGGTTAAATTTAACGTCGAAGAGCTCGCCTCAGAGCTCCTCGATATCGTGCCCGATGTCGATAACATCAATAAAAGAATCGACAATCTAGAGTGCGATATCTGCGACAAGAAATTCGATAAAGTCGACTACTTGTACCGACACCTGAGAAAACATACGGGCGAATTTATATGCCCTTCTTGTTTAGCGGTATTCGCGAGGAAGGAAAACTTGCTGTCGCACACCTGTTTCTCTCAGAAATTGGACTACCACTACGAATGTCCCTTCTGTCAGAAGCCTTTTACGCTAAAAAAATACCTCAGAAGACACATGGTGAAGCACACAGAATGGAACAACTGCAAGTGGTGTCACACCCAATTCTCGTCATCCTCTGAACTCGAGGGTCACAAATGTTTGCAGCCAAAGCACGAGTGTCTCCAATGCAAGAAGCGATTCGTCCACAGAACTCACTTAAATCGTCATTTGAAATTGCACGATAATCCTAAACCCGCTGTTAAACGAGTCAGGAAAAAGCAACCGGATAAACCGGTGATTTGCGAAAAATGCGGAGACGTTTTTAAGAGCCCCTACAGTCTCAAACAGCATCTAAATTTACATGGGGAAAGAACCTTCGAGTGCGATATCTGCCAGAGAAAGTTTCACCGCATCGGAGTACTGAAGGAGCACAAAGCGATTCATCAAGCGGCTCAAATACCCTGCAACACCTGCGGAAAGAAGTTGAAAAGCAAAAAAGCGCTGGATATCCACATGCTCTTGCATGGGAACAAGAAATACCAATGCGACAAGTGTGATAAAAGTTTCTTCCAGAAATGTAACTACCTCAAACACTACAATCAGGTTCACGGAGACAAAACTACGTACAAATGCACTCACTGCCCTTCTCAGTTCACCAACAAGTCGAGTTTCGACAAACACGTAGAGAACCACGCTCAGCCTGCTCAATTCATGTGCGCCTCTTGCCCCAAGTCATTTCACAAGGAGTATCAGCTGAAACGTCACACGCAGTCGAGCCACAGCGGAATAGTCTACCGTTGTCCTTTCTGCCAAATGGCAGGACGTCACAGACACAGTATGAGGCGACATTTCGAAAGACAGCACAGCGTGCTCAGGGACGACTGGGATAAGCCGGGATTCGTTAATCAATTGGCTGAAAAGGCTCCCTCAGCTCCGGTCGATCCTCAAACCGAACAGCCTGATAAATTTGTACAAGTTTCGTACGAAGATATGAACACAAAGGACTTTGGAGACACTGATGCTCAGGACGGAGCGATGCTGCTGTCTGTGACCGGGATGGACGAGAGCGGATTTTTGGAAACTTCTCAAGCAGATAATGTAGCCGATCTGAACTCTGCCGGAGTTAATTGCAATTCGTTGAATGGTCACGAAATTCTGCTGCAAGTTGCGGGAATCGAGCAGCCCGGATCGATGGTAAACTCGGATTTGTCTTTGACTGAGGTGCCGCAGCTCAGTATAAGCGAGACTGACGCTCGTCTGGCAGAATCCGTATTAGGCAATGCTTACAATGCTTGCATATTCGGAGAAGATGGAGGAGACATTATGTTCTACGTACTCGACAACGCGCCTATATCAGAATATTAG
- Protein Sequence
- MSLPVAERKDVNQVNEVSLSACSVCGQPHDTTTCPFLLDLNHVKDTPVLSRARQTVPADLEVARMADGSTTVVARVELPRGTTFGPLYAKRIWTMNPLTHFPIRVFGNTQAETYHLDYSNENNSNWMCFVEPASNAKEQNLICYQVKQDIFYTAMRTISVGEELRVWYAPYYALKMKMPLFNVDFANASATIPEPEIQQIIKTESGKDQMGILNKDVAQELAEKLPAQRLGARDDKATWNCRICSTVICSVVSYAKHLMEHYKPLIGVYCNICNKKCNNVTALERHKNSKHPKSSSNDGIPTSESQQQQNAQTVFLNISDSGGQTSDAMKDILEKFKAGKAITESSLLSSSSVSEKGNHSDLPLLDTNSINVNDLLHNNGGSLIENSSLKSILENHCLNMNLGLGSMTDSILSENISATDSVKFNVEELASELLDIVPDVDNINKRIDNLECDICDKKFDKVDYLYRHLRKHTGEFICPSCLAVFARKENLLSHTCFSQKLDYHYECPFCQKPFTLKKYLRRHMVKHTEWNNCKWCHTQFSSSSELEGHKCLQPKHECLQCKKRFVHRTHLNRHLKLHDNPKPAVKRVRKKQPDKPVICEKCGDVFKSPYSLKQHLNLHGERTFECDICQRKFHRIGVLKEHKAIHQAAQIPCNTCGKKLKSKKALDIHMLLHGNKKYQCDKCDKSFFQKCNYLKHYNQVHGDKTTYKCTHCPSQFTNKSSFDKHVENHAQPAQFMCASCPKSFHKEYQLKRHTQSSHSGIVYRCPFCQMAGRHRHSMRRHFERQHSVLRDDWDKPGFVNQLAEKAPSAPVDPQTEQPDKFVQVSYEDMNTKDFGDTDAQDGAMLLSVTGMDESGFLETSQADNVADLNSAGVNCNSLNGHEILLQVAGIEQPGSMVNSDLSLTEVPQLSISETDARLAESVLGNAYNACIFGEDGGDIMFYVLDNAPISEY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01200421;
- 90% Identity
- iTF_00718868;
- 80% Identity
- -