Basic Information

Insect: Euura saliciscinereae
Gene Symbol: -
Assembly: GCA_018420115.1
Location: JAFFZH010013476.1:28590-31471[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0096 1.1 10.5 0.2 6 21 12 27 6 28 0.86

2 14 0.63 69 4.8 0.0 2 20 34 52 33 54 0.91

3 14 0.37 41 5.5 0.3 1 12 233 244 233 253 0.86

4 14 0.093 10 7.4 1.6 1 20 362 381 362 383 0.94

5 14 0.00014 0.016 16.2 0.1 2 23 388 409 387 409 0.97

6 14 0.00012 0.013 16.5 3.8 1 23 420 442 420 442 0.98

7 14 0.0063 0.7 11.1 0.1 1 23 461 482 461 482 0.90

8 14 0.003 0.33 12.1 0.0 2 23 488 509 488 509 0.95

9 14 6e-05 0.0067 17.4 3.7 1 23 535 557 535 557 0.99

10 14 2.2e-06 0.00025 21.9 4.7 1 23 563 585 563 585 0.98

11 14 0.00013 0.014 16.4 4.4 1 23 591 613 591 613 0.98

12 14 1.5e-06 0.00016 22.5 0.8 1 23 619 641 619 641 0.98

13 14 9.3e-05 0.01 16.8 0.2 1 23 645 667 645 667 0.99

14 14 0.0004 0.044 14.8 0.2 1 23 675 697 675 697 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0096	1.1	10.5	0.2	6	21	12	27	6	28	0.86
2	14	0.63	69	4.8	0.0	2	20	34	52	33	54	0.91
3	14	0.37	41	5.5	0.3	1	12	233	244	233	253	0.86
4	14	0.093	10	7.4	1.6	1	20	362	381	362	383	0.94
5	14	0.00014	0.016	16.2	0.1	2	23	388	409	387	409	0.97
6	14	0.00012	0.013	16.5	3.8	1	23	420	442	420	442	0.98
7	14	0.0063	0.7	11.1	0.1	1	23	461	482	461	482	0.90
8	14	0.003	0.33	12.1	0.0	2	23	488	509	488	509	0.95
9	14	6e-05	0.0067	17.4	3.7	1	23	535	557	535	557	0.99
10	14	2.2e-06	0.00025	21.9	4.7	1	23	563	585	563	585	0.98
11	14	0.00013	0.014	16.4	4.4	1	23	591	613	591	613	0.98
12	14	1.5e-06	0.00016	22.5	0.8	1	23	619	641	619	641	0.98
13	14	9.3e-05	0.01	16.8	0.2	1	23	645	667	645	667	0.99
14	14	0.0004	0.044	14.8	0.2	1	23	675	697	675	697	0.97

Sequence Information

Coding Sequence: ATGGGATCTATGAGTCTCATATGCCCGATGTGTTGCGGAGAAACTTTCAGCAACCCGCAGTCATTGAAGTACCATTTACTGAGCATAACGGACAATCTCTACTGTCCGAGTTGTTCCCAACGCTTCGACTCCGTCCTGGCGTTGATTCAGCATCTCGATCGCTGCGGAGAGTCTCCGGAACCCCCAGAAGCCTCGGTTCTAATGGACGCGAATGTGGATGAAATTGACGGCGCATTCCTCGCGACGGTCAATGGTGGGGACATTATGATCGTCGGAAAGCCTCGGTCCATTCAAGTCGGCAATGACGGAGAGATCAGTGTAGTGGAGGAAATGGAGCTCGGAGAAAGGGACGAGGAGAGTGCGGAGTCTGTTACGAAGGATAAAACCGCTCAACCTTCGGAGCGTGAGGGCAATGAATCTGGTAAAAAATCACCTGAAGTTTTGGAGCCTTTGGTGGAACTGGAGGAAGAGGACGATTGCGATAATGCGGATGATGCGGAGAAGAACGTTATTTCTATTTTACCTCACGATGACCCTGGTCTTCTCGACAATGACGATAGCAGCAATTTAATGAGCGACGATCACCATCTCATGCCTGACGTTGAGGATGTAGAGGATCTAAACGAGGAGGGACTTTTTCAAGTCAAAGAAGAGATGTGCGAGGTAAAACTCGAAGAGTTAGACGGAGCCGCACTCTACAGCTGCAGTAGCTGTGGCCTGAGTTTCAGCTCAGTATTGGATCATATCAAAGAGTACCACGACGGTCAAGAAGTAGTGCTGGAGATGGCTGAGCAGCAGCTGAACGAACTTCCACCACCACTCGTTCCGATAACACCGCGCGAAGAGCCCACATCTGTGATAGCAAATCGCCAGCGTCAAATGATGAACACTTTGAGAACGGAGGAGTGCGTAGACAGCGAGGGGAGATTGTACACGAGAAAAGTAGTACAGATAGAGAGATTCTGGGATCGACCTACTGCCTCGAGTCCAGCTGCCAAATCACCAATGATTGAGAAATTTTTTTCAAACGTTGAAGGAGTAAAGCTCAGAGATAAAAACCAAACTACCGGATCGACGCGGATGTACCGTTGTAACCAGTGCCTTGAACACTTTCCGAAGTTGGGAGACTTCAGAGTTCACGTTTGTCTCAATGGCAACAATCAATGCGGCCAATGCGATCAAGCGTTCGCAACAGCCAAGGCCTTGCAGCTTCACACCAAGGTTCACGACAACGAAGCCGATGGGGTACAGCGTACATTTACCTGTTCCACGTGTGGCACTGAGTTCTCATCTCACAAAAGCCTCAGATTACACTCTCGAATGCATGCCCCGGTGAGGGCTCGGCATGTTGACGCTCCAGAAGGCACACACACTGCTACCTTCACTTGCCCCGAATGTGGGAAAACCTTATCCGAATCGTATCGAGTGGCACACATGGCTCTTCATTCCGGTGGATCCGCAACCTGCGCCGTCTGCAATCGAAAGTTCGATTCTGCAGATAGTTTGGCTATGCATGCGGCAGTCCACACGGAATCTAGTCATTCTCATTCGCCGACTCCACCCCGAGGGGAAGGGAGCGATAGCGCAGATGCCCAAAAGCCTTATCAGTGCCAGCATTGCGGTCGTAGATTTGCCAGACCGCATGAGAAAGTGAAACACGAGCGTATTCACACCGGGGAGAAGCCACACTCTTGTGAGGTGTGTGGCAAGACTTTTCGAGTCTCTTACTGCCTAACCCTCCACATGCGAACTCATACCGGAGTCCGTCCTTACGTTTGTCAACATTGCGGTAAAAGATTCAAGGCTTCTTCGGTATACAATCATCACTTGCTCACTCATGGAGAAGAGAGAGCATACACGTGTCCGTACTGCCCCAAGACTTTTAAAACTCGAGTACAACTGGCTGGGCATAAGAATAGCCATACGAAACCGTTCAGATGTACGGAGTGCTCGAGACCGTTTGCCTCGTTGTACGCGGCAAGGGCGCACATACAGACGCATAAGAAGGACAATAATCTTAAATTCAGTTGTTACATCTGTGGTGCGTCTTATGGTAGAGCATTCGCCCTCAAGGATCACTTGAAGCAACATGGTCAGGACGTATCAGCTCCTCCCGAGCCGACTAGGGAAGAGGAAGTGCACGAAGGCGAAGACTTTCTATTAGCCGAGGAAGAAGTTGAAGACGATGATATGGTGATTCCTTCAGCAGTTGTGCAATCCTCCGAAGCGGAAGAATCGGATTGA
Protein Sequence: MGSMSLICPMCCGETFSNPQSLKYHLLSITDNLYCPSCSQRFDSVLALIQHLDRCGESPEPPEASVLMDANVDEIDGAFLATVNGGDIMIVGKPRSIQVGNDGEISVVEEMELGERDEESAESVTKDKTAQPSEREGNESGKKSPEVLEPLVELEEEDDCDNADDAEKNVISILPHDDPGLLDNDDSSNLMSDDHHLMPDVEDVEDLNEEGLFQVKEEMCEVKLEELDGAALYSCSSCGLSFSSVLDHIKEYHDGQEVVLEMAEQQLNELPPPLVPITPREEPTSVIANRQRQMMNTLRTEECVDSEGRLYTRKVVQIERFWDRPTASSPAAKSPMIEKFFSNVEGVKLRDKNQTTGSTRMYRCNQCLEHFPKLGDFRVHVCLNGNNQCGQCDQAFATAKALQLHTKVHDNEADGVQRTFTCSTCGTEFSSHKSLRLHSRMHAPVRARHVDAPEGTHTATFTCPECGKTLSESYRVAHMALHSGGSATCAVCNRKFDSADSLAMHAAVHTESSHSHSPTPPRGEGSDSADAQKPYQCQHCGRRFARPHEKVKHERIHTGEKPHSCEVCGKTFRVSYCLTLHMRTHTGVRPYVCQHCGKRFKASSVYNHHLLTHGEERAYTCPYCPKTFKTRVQLAGHKNSHTKPFRCTECSRPFASLYAARAHIQTHKKDNNLKFSCYICGASYGRAFALKDHLKQHGQDVSAPPEPTREEEVHEGEDFLLAEEEVEDDDMVIPSAVVQSSEAEESD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01413613;
90% Identity: iTF_00718817;
80% Identity: -