Esal020143.1
Basic Information
- Insect
- Euura saliciscinereae
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_018420115.1
- Location
- JAFFZH010009980.1:1809-3885[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.35 4.8e+03 -2.9 0.1 59 75 4 20 2 25 0.74 2 2 1.4e-33 2e-29 103.5 14.4 1 90 29 118 29 125 0.96
Sequence Information
- Coding Sequence
- ATGGAGTCGCTGGTGGCAGGACGGAGACGAACTGCCACAAGGCATTCCGCCGAGGATCAGGCTCTTGATCAAATTGCAAAAGAGGCAGAAGCTAGACTAGCCGCTCGAAGACAAGCCCGAGCAGAGGCGAGGGAAATACGAATGAGGGAATTGGAGAGACAGCAGAAAGAAGCTGAAGAAAACGCGGACAGAGTTTATGATATGTGTACCGCTGACGCGAACAGAACCATGAGGGTGACACCGGACCCTGTGAGAACCTCTCGGCTTCTTACAAATTCAAATAACTTTCAATCCAGTCGGAGATCGTCGGAGGATTCATTGGAAGATGCTGGCCTCAGTAGAGATCTAAGGGAAGTACAGGCCATACAATCTCAACCAAAAGTGATTCTCGTCGTCGATATTGAGTACTTCGAGATGAGATAA
- Protein Sequence
- MESLVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTADANRTMRVTPDPVRTSRLLTNSNNFQSSRRSSEDSLEDAGLSRDLREVQAIQSQPKVILVVDIEYFEMR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01408213;
- 90% Identity
- iTF_01408213;
- 80% Identity
- -