Basic Information

Insect: Euura lappo
Gene Symbol: Gzf1
Assembly: GCA_018257835.1
Location: JAEUYN010002349.1:297383-299470[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.1e-06 0.00014 22.9 0.5 1 23 18 40 18 40 0.98

2 19 7.7e-06 0.001 20.2 4.1 1 23 46 68 46 68 0.99

3 19 0.0026 0.35 12.2 0.1 1 23 74 96 74 96 0.98

4 19 2.2e-05 0.0029 18.7 0.9 1 23 102 124 102 125 0.95

5 19 0.00067 0.087 14.1 2.8 1 23 135 158 135 158 0.96

6 19 0.00024 0.031 15.5 0.4 1 23 167 189 167 189 0.95

7 19 1.2e-07 1.5e-05 25.9 1.8 2 23 196 217 196 217 0.98

8 19 5.1e-06 0.00067 20.7 1.7 1 23 223 245 223 245 0.97

9 19 2.7e-05 0.0035 18.5 2.8 1 23 251 273 251 273 0.99

10 19 0.059 7.8 7.9 0.3 3 23 316 337 315 337 0.97

11 19 0.00012 0.016 16.4 0.9 1 23 343 366 343 366 0.98

12 19 0.0045 0.59 11.5 2.9 2 23 372 394 371 394 0.96

13 19 9.6e-06 0.0013 19.9 0.5 1 23 400 422 400 422 0.97

14 19 0.00043 0.056 14.7 1.3 2 23 429 451 428 451 0.96

15 19 7.6e-05 0.0099 17.1 2.7 1 23 466 489 466 489 0.93

16 19 0.0083 1.1 10.6 0.2 1 23 501 523 501 523 0.95

17 19 0.0084 1.1 10.6 3.6 1 23 529 551 529 551 0.94

18 19 9.3e-08 1.2e-05 26.2 1.4 1 23 557 579 557 579 0.98

19 19 6.5e-05 0.0085 17.3 0.3 1 21 585 605 585 606 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.1e-06	0.00014	22.9	0.5	1	23	18	40	18	40	0.98
2	19	7.7e-06	0.001	20.2	4.1	1	23	46	68	46	68	0.99
3	19	0.0026	0.35	12.2	0.1	1	23	74	96	74	96	0.98
4	19	2.2e-05	0.0029	18.7	0.9	1	23	102	124	102	125	0.95
5	19	0.00067	0.087	14.1	2.8	1	23	135	158	135	158	0.96
6	19	0.00024	0.031	15.5	0.4	1	23	167	189	167	189	0.95
7	19	1.2e-07	1.5e-05	25.9	1.8	2	23	196	217	196	217	0.98
8	19	5.1e-06	0.00067	20.7	1.7	1	23	223	245	223	245	0.97
9	19	2.7e-05	0.0035	18.5	2.8	1	23	251	273	251	273	0.99
10	19	0.059	7.8	7.9	0.3	3	23	316	337	315	337	0.97
11	19	0.00012	0.016	16.4	0.9	1	23	343	366	343	366	0.98
12	19	0.0045	0.59	11.5	2.9	2	23	372	394	371	394	0.96
13	19	9.6e-06	0.0013	19.9	0.5	1	23	400	422	400	422	0.97
14	19	0.00043	0.056	14.7	1.3	2	23	429	451	428	451	0.96
15	19	7.6e-05	0.0099	17.1	2.7	1	23	466	489	466	489	0.93
16	19	0.0083	1.1	10.6	0.2	1	23	501	523	501	523	0.95
17	19	0.0084	1.1	10.6	3.6	1	23	529	551	529	551	0.94
18	19	9.3e-08	1.2e-05	26.2	1.4	1	23	557	579	557	579	0.98
19	19	6.5e-05	0.0085	17.3	0.3	1	21	585	605	585	606	0.95

Sequence Information

Coding Sequence: ATGACCAAGCTCATAGAGCACTTGAAAAATGTACACGGAATAGAGAGAGCCTTCAAATGCGACGAGTGCGGAAAGGCTTTCAGAAGTCCTATGAACATAAAGAGACACAAACTCATTCACACTGGGTTGAAAAAATACACCTGCGATGTTTGCGATTACACTTGCAACCAGAAAACGAATCTGGAAAATCACAGGAGACGACACGCCAAGGATTACGCATACGAGTGCGAAGTTTGCGACAAGGGTTTTCTTTCGAAGGCGGACTATGTCGAGCACAAGAATGTACACGCGGGAAAAAAACCCTACGCCTGTGAACTCTGCCCAAAGTCTTATCCCTACAAGAATAATTTACTCATTCACAAGAGAATCCATCATCCCGGTTTACTCAAAGCCGTGGACAGCCACAATTGCTCTTTGTGCTCGGCGAATTTTCCTTACAAACGGCTCTTGACTCGGCACATGAAGTCTCAACACGGACTAGAACAGAGTTTGAAAAAATTTCTGTGCGATTTTTGTGGGAAGCAAGTATCTTCCCAGAGCGTTTTGATCAGTCACAGGAGGATTCACACCGGGGAAAAACCGGCTACCTGCGAATTGTGCGGGAAACAATTTAGTACCAAAGAAAATTTGAAACTCCATCAACGAACGCATACGGGGGAAAAACCTCACGTTTGTTTACAATGCGGCAAGGGTTTCACCCAAAGAACTTCGCTCGTTCTTCACATGCGGTATCACACCGGACAAAGACCTTACCAATGCGACGTTTGCAAGAAGGGTTTTATCTCGAACACGTTCTTAAAGAAGCACAAAAAATCTCACGACGATCCTGTTCCCCACCAGTGGCCCCTGGGCCAACAACAATCCGAAGAAAACGTTATGGTGAGAGTCAAGACGGAAAACGCCCCTGTGCCTGCGGAAGAAAAATCCGACAGCAACGTGAAGGCTTGCGAAATATGCAACGAACAGTTCCATTTTGTAACGAGGCTCGTAGCTCATCTGAGAATAGAACACGGGATCCAGAGGCCTTTCAAATGCGGTACATGCTGGCGGACTTACGCCCAGCAATTCATGCTCAATGCGCACGTTAAAAAATCTCACACACCAAAGAACGTCTCCTGCGATCGTTGCAAATTCACGTGTGTCTCAAACGCGGATTTGGAGAGGCACAGGAAAAAGCAACACGAGCCCAAAATAAAATTTTACTGCGATGTGTGCGGTCAGACGTTTACGGACAAGGAAACCTTTTCAGCTCACACAGCTATGCATAACTTCATGGAATATCAACAGTGCGTTACCTGCGGTACAACTTTTAACGACGTCGAATCGTTGAAGGAACACCACAGACTGTATCATTTCGATGCTGCGGCAGCGGCCGAAATGGAGGGAGAAGCCGCCCACAAATGCGACGAGTGTGGAAAGAGTTACAAGTTCAAGTCCGTTCTTAAACAGCATAAAATCAACGTTCACAGCGCCCCTAATTACGAGAGACCGAAACGGAGGTTTCTCTGCGCTCTGTGTGGCAAAGAACTAAAGACAGCTAAGGGATTCGAGATACACAACCGTTCCCACACAGGAGAGAAACCGTACACCTGCGAGGTATGCGGAAAATGCTTCGCATGCGAGACTCTGCTGAGAACCCACAACGTCACTCATACCGGAGAGAGAAAATATACGTGCGACGAATGCGGTAAATCGTTTACACAAAGATCCACGCTCGTCGTTCACAAGAGATATCACACAGGCGAGAGGCCGTACGTTTGTCAAAAATGCGGCAAGGGATTCGTCACTAGAACCGTCCTCAATACTCACCTGAAATCCTGCCGCTGA
Protein Sequence: MTKLIEHLKNVHGIERAFKCDECGKAFRSPMNIKRHKLIHTGLKKYTCDVCDYTCNQKTNLENHRRRHAKDYAYECEVCDKGFLSKADYVEHKNVHAGKKPYACELCPKSYPYKNNLLIHKRIHHPGLLKAVDSHNCSLCSANFPYKRLLTRHMKSQHGLEQSLKKFLCDFCGKQVSSQSVLISHRRIHTGEKPATCELCGKQFSTKENLKLHQRTHTGEKPHVCLQCGKGFTQRTSLVLHMRYHTGQRPYQCDVCKKGFISNTFLKKHKKSHDDPVPHQWPLGQQQSEENVMVRVKTENAPVPAEEKSDSNVKACEICNEQFHFVTRLVAHLRIEHGIQRPFKCGTCWRTYAQQFMLNAHVKKSHTPKNVSCDRCKFTCVSNADLERHRKKQHEPKIKFYCDVCGQTFTDKETFSAHTAMHNFMEYQQCVTCGTTFNDVESLKEHHRLYHFDAAAAAEMEGEAAHKCDECGKSYKFKSVLKQHKINVHSAPNYERPKRRFLCALCGKELKTAKGFEIHNRSHTGEKPYTCEVCGKCFACETLLRTHNVTHTGERKYTCDECGKSFTQRSTLVVHKRYHTGERPYVCQKCGKGFVTRTVLNTHLKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00719612;
90% Identity: iTF_00719612;
80% Identity: -