Elap011384.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- bab1_1
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010001377.1:37716-41044[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-17 1.6e-14 54.1 0.0 1 43 28 71 28 73 0.95 2 3 4.3 3.7e+03 -1.5 1.4 6 15 151 160 149 163 0.88 3 3 2.9 2.5e+03 -1.0 0.0 3 13 190 200 189 204 0.78
Sequence Information
- Coding Sequence
- ATGTGGCAAAAGTGTTGGAACACCAATCAGAGCCTGGTCCACAATCTACGTTTCCGAGAACGCGGACCTCTAAAATCCTGGAGACCCGAGACCATGGCTGAAGCTATTTTCAGCGTACTCAAAGAGGGCCTTTCGCTGAGTCAAGCCGCCAGAAAGTACGACATCCCCTATCCAACGTTCGTCCTCTACGCCAATCGCGTTCACAACATGCTGGGTCCAAGCGCCGACGGCGGAGCCGATCTGCGGCCTAAAGGACGCGGGAGACCGCAGCGAATTCTCCTCGGGGTTTGGCCGGATGAACACATCAGAGGCGTCATCAGAGCCGTTGTATTCAGGGACGGACAGTCGGCACACATCGTCAAGGAAGAACCGGCCACCATGTACCCCAGCCTTGCTAGCTACGCGGCCTGCAATGGTCCCGAAGGCGCCGTCAGCCCAGGGGCCGCTGCGGCTGCCGCGGTCGCTGCCGTTGCTCAGGGCCTCCGTCACCAGATGTGCAGCATGGTAGCAGCGGCGCACTCTCAACAACACGACATGATAGGTACCAATCTGTCGGCAAATTTATCCACGAATATCCAGGCCGCGATTCAGGCTCAACAGAACAACGGAAATTCCCCGTTGAATCTCGGTCTCGCGAGTCCTGGTTCAGGACCGCCCGAAAGTCCCATGGAAAGTCCGCTCGCCAGTCCTCTGGGTCCTCTGATGGAGCCGGGTCACATTCCGGGCAGCGTCGAAGTCGGAATCGGAGTTAGCGGAATGACCTACAAACCTGGGCGAAGTTTCGTCAGTCCAAGACCGGAGAATCTCTTCCAAGAGGACATAGCGGATCTCGTCAAAAGCCCCCACGGACTAAAAGACAAGGACAAGATGACCGTAAAGCTTGAGCCTTTACAGGCGGATTCAAGATGCGAATAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDGQSAHIVKEEPATMYPSLASYAACNGPEGAVSPGAAAAAAVAAVAQGLRHQMCSMVAAAHSQQHDMIGTNLSANLSTNIQAAIQAQQNNGNSPLNLGLASPGSGPPESPMESPLASPLGPLMEPGHIPGSVEVGIGVSGMTYKPGRSFVSPRPENLFQEDIADLVKSPHGLKDKDKMTVKLEPLQADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01015716;
- 90% Identity
- iTF_00939445;
- 80% Identity
- -