Elap016318.1
Basic Information
- Insect
- Euura lappo
- Gene Symbol
- lola
- Assembly
- GCA_018257835.1
- Location
- JAEUYN010002444.1:205404-207705[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 4.7e-07 0.00041 20.8 0.0 2 38 204 240 203 246 0.85 2 4 2e-12 1.7e-09 38.0 0.0 3 39 255 290 253 295 0.88 3 4 1.1 9.2e+02 0.4 0.0 26 34 331 339 324 344 0.83 4 4 7.6e-10 6.6e-07 29.7 0.1 4 41 370 407 367 411 0.91
Sequence Information
- Coding Sequence
- ATGTCGGAGGGACCGAGTCAGTCGGCTGTCGAGAGTCAACAGCACCAAGAGAGCTACTCGTTCAAATGGACCGATTACGAGAATCATGTACCCTGCGTTATTCGACAACTTTTGGAAGAGAATTCTATGGTCGATGTTACCCTTTCCGCTGATGGACACAGGATTCATGCTCATCGCATCGTTCTCTCAGCATGTAGCACCTTGTTTCAAGAAGTACTGAACCAAGTGAACGAAGACGCTCCAACGATAATACTGAGCGATATATCGGCGCAGGATATTCGATGCATAATAGACTTCATGTACAACGGAGAGGTCAGCATACCGGTGGACAATATCAGCACTCTGTTGGACGCTGCTCATTTTTTGAAGATAAGAGGCTTGATGGAGATCGACGGCCTGGACGAAAGCGACGCGACTAACTGCGAGGATTTCGGCGAAGAGGCGGAGGCTGAGTCTTTGAGCGAGCTGAACGAGTCCGAAGAGAGGGAGGTGAATCCTTTGGAACAGGATTTTGATAGCCTTGCTGCCAACTCTCAGGACGAGAGTAACGTCTCGACCTCTGGCCAGAAGCGGAAACGGAGACGGGATACGGGGAAGAAGGAATACAGCGAAGACATGCTTATGGCTGCTATAACCGATCTCAGGGCTGGACACACGCTGATCGAGGCTGCGACCAACCATGGAATACCTAGATCCACTTTGTACATGAGGGCTAAGACCTTGGGCCTGCATTTGAACGCTTCAAGAAACGAATATTCGGCAGATTGTATGAAAGCAGCGATCGACGCTGTGCTGGAAGGTTCCAGTCTGCAGCAAGCCTCTGAACTGTTCGGTATACCCAAGACCGTCCTTTGGCGGAGAATTCAGAAAGAGGGGTACCAGATCCTCGGTCAGCGTACGGAAATGAAGAAATCTTACGACGCAGACAAGAGGGAAGCCGCGGTCAAGGCCTTGGAGAGGGGGGAAAACCTGACTAAAGTTTCGCTTCAATTTCAGATACCAAAAACTACGTTGTTCAGAGACAAAGCGAGGCTGGTGGACGAAGGGAAGCTTCCATTATCATTTTGGAAGAAGCGTAAGACTGAAAACGAGGAACTGAAAAAATCGAGACTGGAGGAGGCGGTGAAAGCCTGCAAGTGTGGCAGAATGTCTCAGGCTGCGGCGTCGATGGCTTATCGAATCCCAAAAACTACTATTTGGAGGAGGCTTCAGCAGGACGGGAAGAAATCAAATCGACTGTCGGATGAGGCGGGTCAAGATAAACCCGAGAATCGGGACGATATGGACGAGCACAAGGGTCAAGACCCCGAATTCACGTACTGCGAGGTCGCTTCGGAAATACCGATAACTTACATAGACGAAAATGGTATACCAGAAGATTCTGTGATAATTTTGACAACGGACGACGTTAACGGTATAAATCTCGAAGAAAGCGAACAAATAATTGTAGGTTCGGATTCTCCCCAAGAATACGTACCGTGCTCTTTGAATATGGACGAAAATACGAGTTACGGAAACAGCGAAAGTTAA
- Protein Sequence
- MSEGPSQSAVESQQHQESYSFKWTDYENHVPCVIRQLLEENSMVDVTLSADGHRIHAHRIVLSACSTLFQEVLNQVNEDAPTIILSDISAQDIRCIIDFMYNGEVSIPVDNISTLLDAAHFLKIRGLMEIDGLDESDATNCEDFGEEAEAESLSELNESEEREVNPLEQDFDSLAANSQDESNVSTSGQKRKRRRDTGKKEYSEDMLMAAITDLRAGHTLIEAATNHGIPRSTLYMRAKTLGLHLNASRNEYSADCMKAAIDAVLEGSSLQQASELFGIPKTVLWRRIQKEGYQILGQRTEMKKSYDADKREAAVKALERGENLTKVSLQFQIPKTTLFRDKARLVDEGKLPLSFWKKRKTENEELKKSRLEEAVKACKCGRMSQAAASMAYRIPKTTIWRRLQQDGKKSNRLSDEAGQDKPENRDDMDEHKGQDPEFTYCEVASEIPITYIDENGIPEDSVIILTTDDVNGINLEESEQIIVGSDSPQEYVPCSLNMDENTSYGNSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01411401;
- 90% Identity
- iTF_00719554;
- 80% Identity
- iTF_00718739;