Basic Information

Insect: Euura lappo
Gene Symbol: bab2
Assembly: GCA_018257835.1
Location: JAEUYN010001391.1:358694-367215[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 5.8e-12 5e-09 36.5 0.0 1 39 376 415 376 419 0.90

2 4 7.8e-12 6.7e-09 36.1 0.1 2 39 431 468 430 471 0.94

3 4 2.8e-18 2.5e-15 56.7 0.0 2 45 486 530 485 530 0.97

4 4 1.6e-18 1.4e-15 57.4 0.1 1 42 537 579 537 580 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	5.8e-12	5e-09	36.5	0.0	1	39	376	415	376	419	0.90
2	4	7.8e-12	6.7e-09	36.1	0.1	2	39	431	468	430	471	0.94
3	4	2.8e-18	2.5e-15	56.7	0.0	2	45	486	530	485	530	0.97
4	4	1.6e-18	1.4e-15	57.4	0.1	1	42	537	579	537	580	0.97

Sequence Information

Coding Sequence: ATGGATCGGAATTGGGGAACACACTACAGTGGAGGGATGGCGGGGCAGCACTACTGCCTCCGCTGGAACAATTACCAGTCTAACATGACTTCCGTGTTCCATCAGCTGCTTCAGACCGAAGCATTTGTCGACGTAACTTTGGCTTGTAACGAGGCATCGCTGAAAGCTCACAAGGTTGTATTGTCGGCGTGCAGTTCGTACTTTCAAAAATTACTACTCTCCAATCCGTGCAAACATCCGACGATAATTATGCCACAGGATGTATGTTTCACCGATCTTAAATTCATCATTGAATTTGTATATCGTGGTGAGATAGACGTTTCACAGGCTGAACTTCAGTCGTTATTGAAAACTGCGGATCAGCTCAAGATCAAAGGTCTCTGCGAAGTACCCGAAAGTAAAGAAGGCCCGCCGTCGGTGAGCCTCAGTTCGCCGCCCAGGGACAGAGACTCCGGTACACCTCGTTTGAATTATACGAAATTGAGGAGACAGCATCATCCGAGGTACAAGAGACCCAGGTTCGAGGCGAGGTCGGATTCTAGGATATTTGAAAAATATAAAGAGGAGGATACCGAGGGATTTTGCAGAGACGACAAAGAGAACCACAGGGACTGGCAGACCGAAGATGAAGAATTTGGAGAACCCACAGTAGTTCTGGAATCTAGACAGAAGGATTTAAACAACGGTAACACTAACAACAACAACGGTGAGATGTTTTGTCATACAGGAATGGGACATTACGCTCATCATACGGATCCAGGAGACGTTGATTTACCGCCTGAAACTCAACCCACACCTCCGAGCGCTACTCTTGTCGGTACTACGATAACACACTTGAGAGACCCTGACCACCAGTCGACAGAAATACAAAATTGCGACAGTGTTAAAATAAAATTTGAGACACTGCACACGATGGACTCGACGGACACGATAGATATAGATAGTCATATGTCAGATCGAGCTAGCGTCAGTTCAAAAACGACCGGAGATAATGACAACATGATGATGATCACTCCAGAGCTACTTGGACTAATGCCGTCCGGGAGTTCCGGCCACTCCGAAGCCGGCGACAACGGGAGATCCTCGGGACAAATCGGCTCTCATCACCACGGCTCCAAGTCATGGACCCAGGACGACATGGACGCGGCTTTAGACGCTCTAAGAAATCACGACATGAGCCTCACCAAGGCTTCCGCTACTTTTGGCATACCCTCGACGACTCTTTGGCAGCGGGCTCATCGCCTGGGTATCGACACCCCGAAAAAAGATGGACCCACAAAATCGTGGAGCGACGAGAGTCTAAACAACGCTTTGGAAGCCCTCCGCACGGGCACAATATCGGCTAATAAGGCCTCAAAAGCGTTTGGCATTCCTTCGAGCACGCTTTACAAAATAGCGAGAAGGGAAGGCATCAGATTGGCCGCGCCCTTCAATGCCAGTCCCACGACGTGGTCGCCGGCCGATTTGGACAGAGCCCTGGAGGCTATTAGATCGGGCCAAACTTCCGTCCAGAGAGCTTCCACAGAATTTGGTATACCGACTGGCACGCTTTACGGAAGATGTAAGAGGGAGGGGATAGAACTCAGCAGGAGTAACCCGACGCCTTGGAGCGAAGATGCCATGACCGAAGCCTTGGAGGCTGTGAGGATGGGTCACATGAGCATAAATCAAGCAGCGATACACTACAATTTACCGTACTCGTCGCTTTACGGACGATTCAAAAGAGGAAAATACGAGGAACCTGTAGGAAATGAAATGTCCCAGGACAGTAACAGCCTTCATTATCATAGCCCGAACCAAAATCATTCGTCTTCTGTTCCGGATCAAATGCCCTATCAGGGTAGCTGA
Protein Sequence: MDRNWGTHYSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFTDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPESKEGPPSVSLSSPPRDRDSGTPRLNYTKLRRQHHPRYKRPRFEARSDSRIFEKYKEEDTEGFCRDDKENHRDWQTEDEEFGEPTVVLESRQKDLNNGNTNNNNGEMFCHTGMGHYAHHTDPGDVDLPPETQPTPPSATLVGTTITHLRDPDHQSTEIQNCDSVKIKFETLHTMDSTDTIDIDSHMSDRASVSSKTTGDNDNMMMITPELLGLMPSGSSGHSEAGDNGRSSGQIGSHHHGSKSWTQDDMDAALDALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRMGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVGNEMSQDSNSLHYHSPNQNHSSSVPDQMPYQGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141914;
90% Identity: iTF_01413017;
80% Identity: iTF_00718735;