Eruf013503.1
Basic Information
- Insect
- Eutolmus rufibarbis
- Gene Symbol
- -
- Assembly
- GCA_963920795.1
- Location
- OY987205.1:50066135-50070541[+]
Transcription Factor Domain
- TF Family
- zf-LITAF-like
- Domain
- zf-LITAF-like domain
- PFAM
- PF10601
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family display a conserved zinc ribbon structure [3] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS)[2]. The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.2e-07 0.0026 19.0 2.3 2 43 21 64 20 77 0.79 2 3 0.022 1.1e+02 4.2 0.0 5 25 348 368 344 379 0.82 3 3 1.1e-14 5.6e-11 43.6 5.8 4 70 620 686 617 686 0.95
Sequence Information
- Coding Sequence
- ATGGCTAACAACAGAAAGCAAGTTATGCCGCTCCCTGGTGAAGTTCTTGGATTACCTGAAGAACCCTGCAAAGTTACCTGTCCATCATGTGGTGCAACGGCGGATTCAGTTGTGCAGAAAGAAATTACGACTTTTAGCCACAAGGCATCCATGTGGTGTTCGTACATTTTCAGTTTCAAATGCAAGTTGTGCGGTAAAAGTTTGAGTGTTGATAGCAATAATGATGCTACGCCTCTACTAGAGCACATTATAACTTCGCatcctgaaataaaaattccggACTCCGTTGCTAATGAAACCGCAGAAGACGTAGAGGaagcaaaaaggaaaaaccaGCTGCATAtcccgaaaaataaaattggtcaAATTAAAAAGCCAGTTTCAGGCGACAGCGATAAGTCTACAGGACaatcaatagaaaatattcCTCAAAACTCCGAAGGGTTTAATGAAAAAGGTCATACGTCTAAATCGCCAAAATCTCAAGATCCGAACAAAGAACCAAGTCCACAAGAATCTAAGAATTCAGTTGGTAAAACGCGTATCATAAAACCTAAGAACTCTAAAACTCCTGTTGACCGCACTGTGTCAGAAGATAACTATCACACACCACGTTCTTCCGTAGAATTACCTTCTAAACCAAAAGACTCCAAAGCTGCCGTGAACAAAGGTTCCAAGGATAAAAATGACAAGCCAGGTACTTCTAAATCCAAATCGCAAACTTCCCAAGAGTTGATATCAAGCAATTCTAAGAAGTCTGCTAACAAAAAGCAATCCGACAAGTCCGAAAATCGTAGAAATTCTTCTGATACATTTTCCAACATCAAGACAAAGGATAATCACCAGACACCAAGTGGTTCTATAGAATTGCCTACTAAAAAACGACAGGCAGACTCAATGGCTTCCGGTGATGAAACAACTAGCGCCGGGTCCAAGAACAATGTTCCTAAATTAACCAAAAAGTCGAATGCTCCTTTGGGGGTGCAAGCTTACGATACAAAATATCGTTATAGtattgaaaaatggaaacctggaaatggaaaaattctTTGTCCAAAATGTGGAATGAGACAACGACCAATTCTTCGTACACGATCAGACAAAACATTCAGATTACTTAATTACGTGCATGGACTCCATTATCCAAAAATGTCTCTACGTGTTAAATGTATTTTGTGTGgcgacaaattaattattcaaaaagatGAGACTACGCCTCTTTTAGATCATATTAAAAGTTCACATCctgatataaatatttcaaaatcaaatctaAATGTAATGAATTCAAAGTATGAAGAAAAGTTACTTCTTAATGAAACTCAACAAGGAACACTAAAGCAAAATggatatgaaaataaaaaagatgagGGCTATAAAATTTTGGAGGCCGGAGATTGGGATAAACCTCAGAAAAATTCTGCATCGAACAGTGCTCGACAAGAAATCAATGCACCtgaaataaatctaaaagaCTTCATTAGTGGACAGCCTGAGATTACTTGTCTCAGTagtgatataaaaattcaaaaccaaTCCAAACCATTAACCATTGATCAGGGTGAACTAGATCAGTTATTATCAACGGGGTCGGCACAAAAGTTTATTGGATGGCAATACAAACAAACTCGGGAAAGTGTTGatcaaactcaaaaatttgatggattacattttaaacaacCAGAACACGAATTAAATATTCCATTAAAAGTTAGTGTTATGAACAATGGGAGAAACCCTCGTGTTGTGTACAAGCgtaggtataaaataaagggTATTCCTCTGCAATGTCCAGCTAGAAGTACTAGCACAGTGACGTTATATAAAAACAGCTTAAAAAGATGGAAACCAGGAAGAGGAACAATTTTCTGCCCAAAATGCGGAGCAAATAAACATCCTATTGTTAAAACTCATACCGATAAAatttcgAATTCGCCACTTGGAGCAGCTTGCATACTCACCTGTTGGCCACTTTGCTTCTTACCTTGCCTCTTCCCCCCAGCAGCAACggaatatttatattgttctgtatgtaataatttattgggTACTTACGATAGAAAAACCGAAGTTATACAACCAGTCACTGAAAAAACGGAAAAGAGGCCGTCCATGCAAAGTCCAAAAGCAAATAATTCAGCTAGGGAAGTTTCAGACTTTGCCCCAGTATCAGCTTCTGATGGAAAACAGAACAAAACACCAAAATAA
- Protein Sequence
- MANNRKQVMPLPGEVLGLPEEPCKVTCPSCGATADSVVQKEITTFSHKASMWCSYIFSFKCKLCGKSLSVDSNNDATPLLEHIITSHPEIKIPDSVANETAEDVEEAKRKNQLHIPKNKIGQIKKPVSGDSDKSTGQSIENIPQNSEGFNEKGHTSKSPKSQDPNKEPSPQESKNSVGKTRIIKPKNSKTPVDRTVSEDNYHTPRSSVELPSKPKDSKAAVNKGSKDKNDKPGTSKSKSQTSQELISSNSKKSANKKQSDKSENRRNSSDTFSNIKTKDNHQTPSGSIELPTKKRQADSMASGDETTSAGSKNNVPKLTKKSNAPLGVQAYDTKYRYSIEKWKPGNGKILCPKCGMRQRPILRTRSDKTFRLLNYVHGLHYPKMSLRVKCILCGDKLIIQKDETTPLLDHIKSSHPDINISKSNLNVMNSKYEEKLLLNETQQGTLKQNGYENKKDEGYKILEAGDWDKPQKNSASNSARQEINAPEINLKDFISGQPEITCLSSDIKIQNQSKPLTIDQGELDQLLSTGSAQKFIGWQYKQTRESVDQTQKFDGLHFKQPEHELNIPLKVSVMNNGRNPRVVYKRRYKIKGIPLQCPARSTSTVTLYKNSLKRWKPGRGTIFCPKCGANKHPIVKTHTDKISNSPLGAACILTCWPLCFLPCLFPPAATEYLYCSVCNNLLGTYDRKTEVIQPVTEKTEKRPSMQSPKANNSAREVSDFAPVSASDGKQNKTPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00717951;
- 90% Identity
- iTF_00717951;
- 80% Identity
- iTF_00717951;