Basic Information

Insect: Eutolmus rufibarbis
Gene Symbol: -
Assembly: GCA_963920795.1
Location: OY987206.1:3738294-3741337[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.1e-05 0.0017 19.8 2.8 2 23 251 272 250 272 0.92

2 12 4.3e-07 7.1e-05 24.2 0.3 1 23 278 300 278 300 0.98

3 12 2e-05 0.0032 19.0 1.8 1 23 306 328 306 328 0.98

4 12 6.6e-06 0.0011 20.4 1.1 1 23 334 357 334 357 0.96

5 12 0.00043 0.071 14.7 2.4 1 23 365 387 365 387 0.97

6 12 1.7e-05 0.0028 19.2 3.6 1 23 395 417 395 417 0.98

7 12 1.1e-06 0.00018 22.9 2.8 1 23 423 445 423 445 0.99

8 12 0.00011 0.018 16.6 4.3 1 23 451 473 451 473 0.99

9 12 3.3e-05 0.0055 18.2 1.7 1 23 481 503 481 503 0.98

10 12 0.00046 0.076 14.6 2.0 1 23 511 534 511 534 0.95

11 12 0.00098 0.16 13.6 0.0 2 23 543 565 543 565 0.93

12 12 0.0088 1.4 10.6 2.1 2 23 571 592 571 592 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.1e-05	0.0017	19.8	2.8	2	23	251	272	250	272	0.92
2	12	4.3e-07	7.1e-05	24.2	0.3	1	23	278	300	278	300	0.98
3	12	2e-05	0.0032	19.0	1.8	1	23	306	328	306	328	0.98
4	12	6.6e-06	0.0011	20.4	1.1	1	23	334	357	334	357	0.96
5	12	0.00043	0.071	14.7	2.4	1	23	365	387	365	387	0.97
6	12	1.7e-05	0.0028	19.2	3.6	1	23	395	417	395	417	0.98
7	12	1.1e-06	0.00018	22.9	2.8	1	23	423	445	423	445	0.99
8	12	0.00011	0.018	16.6	4.3	1	23	451	473	451	473	0.99
9	12	3.3e-05	0.0055	18.2	1.7	1	23	481	503	481	503	0.98
10	12	0.00046	0.076	14.6	2.0	1	23	511	534	511	534	0.95
11	12	0.00098	0.16	13.6	0.0	2	23	543	565	543	565	0.93
12	12	0.0088	1.4	10.6	2.1	2	23	571	592	571	592	0.97

Sequence Information

Coding Sequence: ATGAACCTGAAAGTGGATATCAACGTCTGCCGGGTGTGCCTCAAATCGGAGGGCGGCGTCTCGCTCTACGGGGACCTGGCGCTGATCGAGAAGTTCCAAAACATCACCCAGCTGAAGGTGAAAGAAAACGACGGAATGCCAGGGATTTTGTGCGGGATATGTGCGGCGCGGCTGAAAGTGGCCCATGAGTTCCGGAAGCAGGCCGTCATTTCGGACAGCCACTTGCGGGCTTTTATCAGTAAAGTGAACACCCAGTTCAAGGAGGTGGCCAACTCGACGGCGACCACCTCGAAGAGGTCCCACGACTTGAACGACGACGAAATGCGGGTGCTCGTCGAGGCCGGCTACAAGCCCCCAGAATCTGAGATCTTCGAGATGCCCCTCATCGACTACCAGGAAAAAGTGGAGGACATGGAAAATTTGGAGAACGCCGAGGAGCCCCAGACTGAGGATGACATGTCCCAGCACATCGAAGAGGACTTTGGGGGCTTCATCCAGGAAGACGACGACGGCGAGGGCAACCCCTTCTGCGACGAGGCTGATGAGGCCGACGAGGGTGACGAGGAGGAAATGCATCTAGAAGAGGAGGAGAACGTTTCAGCGACCGAAATGACCGGCGACAATGCGTCCAACCACGAGGACGGCCTGGCCGACATCAAGATAATGGAGACCCAAATTACCCAAGGGTTTCTCATCTCCGAGGTGAAAAAGGATCCTCTGGAGAAGCCGAAGAACGAGAATCGGTCCCACATCTGCATAAAGTGTGACAAGGACTTCAGTACAAAGACAAACCTCATGAGGCACATGCTGACCCACGATGGGGTCAAGCCGTTTCAGTGCAACATCTGCGGGAACGGGTTCACCCAGAACGGGTCCCTCAAGCAGCACATGCTCATCCACACGGGGGAGCGGCCCCACAAATGCGAGATCTGCGGGAGGGGATTCACCCAAGCGAAATCGCTGGTCTTCCACATGAGGAGACACACTGGCGAAAAGCCCTTTGCGTGTAACAAGTGTGGGCTAACTTTTCGACAAAAGGATGGAATGAAGCGTCACGTTCAAATGAAGCATTCCGGAATGCCTGCAGAAGTCCACATTTGCTCAATATGCAATAGAGTGCTACagtcaaaatattctttatctCTGCATATGAAAAAACATCTCGGTCACCAAGAGAATAGTCACAAGTGCGAAATCTGCGAAAGGgcattttcatcaaaaacatCACTAGAGATCCATCATCGTCAGCACACAGGTGAGAAGCCATTTAAGTGTGAAACATGCGGAAAAGAATTCTTTCGCAAAAGTTCTCTTGTGACCCACACGAAGACTCATCTTGAGGACAAGCCTTATAAATGTAACACATGTGAAAAGGGTTTCGTGCAAAAGCACCAAGTCCTCGCTCACATGCACAGGCACAAGAGCCACCCGCCCAAAACCTTTCAGTGTGGTAAATGTTACAAAAGTTTTGCCATAAAACGAAATCTGCTCCAGCACCTCCGAAACCATAACCGCAATGCTATGACCATCTTCAAGTGCGATGAGTGCAGCATAGCCTTTAACACTAAAAGGGGTCTCAAGTTGCACCGACACAACGAACACAAGGAGGCCGTCTCTGACCTGAATGAATGTGATATCTGCAATATTCCGTTTGTCTCTGTCAACGATCTCAATCAACATATGATTGCAGTACATGACAGAATCGATGCTAAATGTGAACTATGTATGCAACATTTCACATCGAAAAAGCTTTTAGAGGATCACATGCTGGAGCATGAACTTTTGACTATCAgttga
Protein Sequence: MNLKVDINVCRVCLKSEGGVSLYGDLALIEKFQNITQLKVKENDGMPGILCGICAARLKVAHEFRKQAVISDSHLRAFISKVNTQFKEVANSTATTSKRSHDLNDDEMRVLVEAGYKPPESEIFEMPLIDYQEKVEDMENLENAEEPQTEDDMSQHIEEDFGGFIQEDDDGEGNPFCDEADEADEGDEEEMHLEEEENVSATEMTGDNASNHEDGLADIKIMETQITQGFLISEVKKDPLEKPKNENRSHICIKCDKDFSTKTNLMRHMLTHDGVKPFQCNICGNGFTQNGSLKQHMLIHTGERPHKCEICGRGFTQAKSLVFHMRRHTGEKPFACNKCGLTFRQKDGMKRHVQMKHSGMPAEVHICSICNRVLQSKYSLSLHMKKHLGHQENSHKCEICERAFSSKTSLEIHHRQHTGEKPFKCETCGKEFFRKSSLVTHTKTHLEDKPYKCNTCEKGFVQKHQVLAHMHRHKSHPPKTFQCGKCYKSFAIKRNLLQHLRNHNRNAMTIFKCDECSIAFNTKRGLKLHRHNEHKEAVSDLNECDICNIPFVSVNDLNQHMIAVHDRIDAKCELCMQHFTSKKLLEDHMLEHELLTIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01183995;
90% Identity: iTF_00936748; iTF_01183995; iTF_00937486; iTF_00628570; iTF_01461341;
80% Identity: -