Basic Information

Insect: Eutolmus rufibarbis
Gene Symbol: -
Assembly: GCA_963920795.1
Location: OY987209.1:29643802-29645546[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.0032 0.53 12.0 0.1 3 23 65 85 64 85 0.97

2 14 0.2 32 6.4 0.1 1 23 91 113 91 113 0.94

3 14 0.012 2 10.2 1.2 1 23 187 210 187 210 0.92

4 14 3.1e-05 0.0051 18.3 0.7 1 23 216 238 216 238 0.98

5 14 3e-06 0.00049 21.5 2.7 1 23 244 266 244 266 0.97

6 14 0.00016 0.026 16.1 1.7 1 23 271 293 271 293 0.98

7 14 0.0036 0.59 11.8 0.2 1 23 299 322 299 322 0.96

8 14 1.4e-05 0.0023 19.4 0.6 2 23 330 351 329 351 0.95

9 14 2.4e-06 0.0004 21.8 1.4 1 23 357 379 357 379 0.97

10 14 4.3e-07 7.1e-05 24.2 0.4 1 23 385 407 385 407 0.99

11 14 3.8e-08 6.2e-06 27.5 0.6 1 23 413 435 413 435 0.98

12 14 3.8e-05 0.0062 18.1 0.5 2 23 442 463 441 463 0.96

13 14 1.6e-06 0.00026 22.4 4.3 1 23 469 491 469 491 0.98

14 14 2.6e-05 0.0042 18.6 5.6 1 23 497 519 497 519 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.0032	0.53	12.0	0.1	3	23	65	85	64	85	0.97
2	14	0.2	32	6.4	0.1	1	23	91	113	91	113	0.94
3	14	0.012	2	10.2	1.2	1	23	187	210	187	210	0.92
4	14	3.1e-05	0.0051	18.3	0.7	1	23	216	238	216	238	0.98
5	14	3e-06	0.00049	21.5	2.7	1	23	244	266	244	266	0.97
6	14	0.00016	0.026	16.1	1.7	1	23	271	293	271	293	0.98
7	14	0.0036	0.59	11.8	0.2	1	23	299	322	299	322	0.96
8	14	1.4e-05	0.0023	19.4	0.6	2	23	330	351	329	351	0.95
9	14	2.4e-06	0.0004	21.8	1.4	1	23	357	379	357	379	0.97
10	14	4.3e-07	7.1e-05	24.2	0.4	1	23	385	407	385	407	0.99
11	14	3.8e-08	6.2e-06	27.5	0.6	1	23	413	435	413	435	0.98
12	14	3.8e-05	0.0062	18.1	0.5	2	23	442	463	441	463	0.96
13	14	1.6e-06	0.00026	22.4	4.3	1	23	469	491	469	491	0.98
14	14	2.6e-05	0.0042	18.6	5.6	1	23	497	519	497	519	0.98

Sequence Information

Coding Sequence: ATGGCAAATGATCGTTTGAGTGCTGGCGGTGAACTTccgctttttaatttaaaatttacgagtCCACATCTTGATGTTTCCGTTGTTGAAACAGAATTGGGGCTCACCCAGGCACTATCCAGCCCTTGGAACACACATTTGCACCccaacgaaaataaatatttgccgGGAAAACCGCCTTACAGAAATATTTGCACTATTTGTGGCGATTCTTTTGAAGGTTCACTTGCGCTAAAGAAACACCTCGAAACGCACAACAATGGAGCTCCCTTTGAATGTCCATACTGCGCCAATCTCTTCGATACTTTGAAAGAGTTTTCAGaCCACGTTGTGATACACACTCCTAAGTTGAAACTGTTAGCAGGGCTAGAGACGCAACGGAATCTGCAGAAATCTGCGGAAAATCAACCTCTTGAACAACCAGATGATCCAGAACCAGAGCAATTAGAAGAACAATGCTGTGATACCccagaccatgtagaatcacCTAAAACGCCTGCTCAAGAAACTAAACTGGGACCCCTCCCTTGGCAAACAAAAGACAACAAATTCCGTCCatataattgcataaaatgCAACAGATCCTTTACTTTAGCCAGCAGTTTAGCGCTCCACAACAAGAGAAAGCATCTGCTCATAAAGCCCTTCGAGTGCAGCATTTGTAGCTCTGCTTTTGTTCAATCTAGCGATCTTTATAAGCACAAAATGACGCATACTGGAGAAAAGCCCTACCACTGCGAAGATTGTGGTGCACGTTTCAGCCAAAAGCGCAATTTAAGGAACCATCAAACCCTGCATTCTAACAACAAGCATAAATGCAGCTACTGTGGTCTAGGATTTCAGAATGAAAAAAGTCTTGTCCAGCACGTGAAATCTCATGAAGGCGAAGGGTCCCATAGTTGCGCAATTTGCTCAATTCCTTACGTTAACCAAAAAGACTTAGATTTGCATGTTAGACGAGCCCACGAAGTTGCTCCGAACGATTTAGTCTGCCTAGTTTgcgataaaacttttaattctcGCTCAGAGTTAACTCAGCACAGTATAAAACACACAGGGGAAAAGCCCTATACTTGTGATACCTGTGGAAAATCCTTCGCCCATCGAACGAGTCTTATAAACCATAGAGTGGTCCACACtggaaaaaaatcctaccaGTGCACCTACTGTGGCCAGGCGTTTGGATTCTCTGGGAATCTTAAAGCTCATACGCGAATCCACACCGGTGAGAGGCCTTTTGAATGCGAGATTTGCCAGAAAACGTTCGCACGATCGGCAAATTTAAAGGAGCATCTTAAAACGCACACGGGAGAGAGACCAATTAGTTGCGATTTCTGTGGGAAGGCCTTCACAAGCACATCGGGGTATGCAAAGCACAAGAAAATCCACACCGGGGAGCGGCCTCATAAGTGTAATATTTGCAACAAAACTTTTGTGCAGATGGTCCACTTGAATAAGCACATTCTGACGCACACTGGAGAGAAGCCCCACCAATGTGAGGTGTGCCATAAATTCTATAGGAGAAAGGACACCCTAGCGAAGCATTTACAGTCGCATGAAGTCAAGGAATCTGTAAGCAATGAAGAACAGGACGTGGTTCACGCGATTAGGATTGAATTTAGTGATCTGCACCAATGA
Protein Sequence: MANDRLSAGGELPLFNLKFTSPHLDVSVVETELGLTQALSSPWNTHLHPNENKYLPGKPPYRNICTICGDSFEGSLALKKHLETHNNGAPFECPYCANLFDTLKEFSDHVVIHTPKLKLLAGLETQRNLQKSAENQPLEQPDDPEPEQLEEQCCDTPDHVESPKTPAQETKLGPLPWQTKDNKFRPYNCIKCNRSFTLASSLALHNKRKHLLIKPFECSICSSAFVQSSDLYKHKMTHTGEKPYHCEDCGARFSQKRNLRNHQTLHSNNKHKCSYCGLGFQNEKSLVQHVKSHEGEGSHSCAICSIPYVNQKDLDLHVRRAHEVAPNDLVCLVCDKTFNSRSELTQHSIKHTGEKPYTCDTCGKSFAHRTSLINHRVVHTGKKSYQCTYCGQAFGFSGNLKAHTRIHTGERPFECEICQKTFARSANLKEHLKTHTGERPISCDFCGKAFTSTSGYAKHKKIHTGERPHKCNICNKTFVQMVHLNKHILTHTGEKPHQCEVCHKFYRRKDTLAKHLQSHEVKESVSNEEQDVVHAIRIEFSDLHQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01183981;
90% Identity: iTF_00718191;
80% Identity: iTF_00718191;