Basic Information

Gene Symbol
Dcr-2
Assembly
GCA_963920795.1
Location
OY987209.1:12515284-12527207[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-32 2.2e-29 103.8 0.1 1 117 696 818 696 841 0.89

Sequence Information

Coding Sequence
ATGGTGGAGCCATTGGATTTGACTGAGCAGGATGAGCAGATGCTGCAGGCCAGGGATTACCAGGAGGAGATCCTGGAGAGGGCTTTGAAGCAAAATGTGATCATCTATCTGCCGACTGGAGCGGGCAAGACGTTCATTGCGGCGATGGCCATCAAGCGGATGTCCAAGGATTTAGCAAAGCCTCTAAGCGAAGGTGGCAAAAGGACAGTGTTCGTTACTAATACTGTAGCGTTGGCAAAACAGCAGTGCACTGCACTGCAAAAGCAGACCAATTTAAAGGTCAACGTCTATACAGGCGAGAGAAATGTTGACTATTGGGGACGTGATAGGTGGGACCTCGAATTTGAACAAACTCAGGTTATCGTTGCAACTTGCCAAATAATTGTGGATATCATAACTTCTggcattataaaattaagcaatttcaaCTTGCTTATATTTGATGAATGCCATAACGGTACTAAAAATCACCCGATGCATATTCTTATGGGTCATTTTCGCTACGTACCAGAGAATAATCACCCAAGAATTATTGGATTGACGGGTATATTAATGAAGTCTCCTACTATAAAAACCGTCCTTCAAGAGCTTACGAATCTGGAGGCTACTTTTAGATCTGTAATTGTGACCGtgtcaaatttagaaaagtttaaaaacgttttgctATATTCTACAAAACCAAATGAACTTTTCATACCTTACTCAAATATAAACTACAATAAGAGTAGCATTTACGACAAAATTACgattttagttgaaaaaactaaagaagtAGCTCTAAATTGGAAAGGAGATGAAACGgatttcgaaaaaacaaaagctctTAATGACAAGGCTGAACCGAGTCCGGTTAAGAATGCTGCAAATCTGTTAAATGATTTTCTCTATCAATTGAACGATTTGGGACTCTATGGAGCATCTATTGGTATTAtgactttaataatatctttcGAATTAAGAAAACGTTCAGCTAAAACTCTAAATATGCGAAATACGTACAGAATGTGCATTACAATGGCTGATAGAATTAGACATTTACTAGTTAAACACCTTTACGGCGATGATGATGAAGAGGAAAAAGAAGTCGATGTAATTCTTTCAAATTCGTCACCAAAGATGCAGAAGCTGCTTGTCCAccttaaggaaaaattttcaggCAAGAATCCAAATGACATATCATGCCTTGTTTTTGTCCAGCGACGTAGTACTGCTAAAGCTGTCTATCACATCGTAAAACGCTTTGCCAAGGTTTCCGAAAATATTCCTCTTAAACCGGCCTTCATGATTGGTAGAAATAGATCTCTATCGGAACCTATAACGGCAAACCTTACGGATAAATGGAGTGAATCAgccATTAACGAGTTTAAGAGAGGCGATGCAAATTTCTTAGTTGTTTCAAGTGTTCTCGAGGAAGGTATCGACGTTCAAAGTTGTAACTACGTCATAAGATATGATCGCGTTGACAATTTCCGCAGctacatacaaacaaaaggcAGAGCACGAAGTAGGGAGAGTGAATTCGCAATGATGGTAGAAATGAACGATCATGCAAAAGTTATACAGAATATCACAAAGTATCGACAAATCGAAGAAGAGTTAAGAAAGTTTCTAATTGAGAAGGCGATTGACAGAAAGAAGCCCTTAACCgaagatatattaaaacaattcccaGTTAATGTGCCACCATTGAAGACATCAAAAGGAGCAATACTTGAAGCACATGCAGCATTGAATTTGCTTAATCGATACTGTATGTCACTTCCAGGAGATTGTTTTACATTGTTTAAGCCTAAATGGGAGAAAACTGAATATGTCGAAACGAATTTTACGAACATAGTGGCAAAAGTTACATTGCCTCCACAATCAACCATTAAGGAACCCATTTCGAGTCTTCCAATGCGAAGCGTTTATCTTGCGAAGGCACATGCTGCCTTTATGGCTTGCGTACAGCTGTATCACAATGGTGAATTAAATGATCATCTCTTGCCAATAACACCAAAAATTAGCAATGAAATAACGGATAATTTGTACTTTCAGCATTGGCAGGAATTTCCTGAAGCAATGGTGACGGGAGAGGGACCGAAACTAGTTATCCTGGAGGAACCAGTGGAAAAGTTTCGTTTTCGTTACAAATCTGAAATGCACGGAACACATGGGTCTTTGATGGGTTCATCTAATAGCAAgtcaaagaaaacttttccaacAGTTGTGTTCAAGGGATATGAGGGAAGGGCTGTTATTCGGTGCAGTCTTTATCAAACCAGTGATACCTTGGTATTATCACCGCATTCCCACAAATTGGTGGTTCGGCACAACGACATTGATGTTTGTGATCCGCACGATCTGAGGGTATCGAAGGAGGATGGATACTGGGCAGTttttcaagGGATGGGAATAATTCATACTGCAAAGAAGCATATCGTTGAAGAGTTAGTAGCTAAGAAAATTCGGGAGAAGCAGTTTGAAGAAGGACGTCCGCTCACACCACTTGAAGAAAGCACTgtggATGTATTTATTCAGCTCCTTAGACCAACAGATGGTGATGTTAGTGAACCAGTTCCTTTCCGATATAAGCCAAGAGAATTTACAACATCAAGGAAAAGAGCTCGTACAAATTCTTCAGGATTAAGCTCAGGAAATATTCCAGAAACCGTTATGTCTGTTATTAAAAACAGCCCTCAGGCCAGCAATTCACATGgatttccaaataaaagtgATGTTATCGATGAATTTTTAGGCAATCTTGATCAAaaggttttagaaaattcagatGaattgtttaaattattcgatAACTCCTATTTGGAAATGGACAGTGGGGGGAAGCTGGAAAAAGATGGTGCATCTCCTAAGGTGTCAATGAAATTGAACTCGAAAAAGttagcaaaattaaatgtacatCATAATTCCTCCGAGTTACTGCAAATGCAAGCACAGATGGCTGGTCCCCAAATACAGCCACAAATAGGTGATTCAACGATGATGAGGTCCGGGCAGTTCTACGGACTTAAAGAATCAATGGATTCAACCTATCACtcgtattttaacaaaattcgcTCTACTGTTAGAAGGAGCGAAAAGCTGGATATTGGAAAAACGAGTGCTgatattttggatattttccaaatagcAAAGTCACAGCACAATTGCAAtctCCTTCATGACGTAATAAGAGAAGGCGACAACAACGTGATGGTTAAGCTTCTTCAACTGATCGATAGGTTGGAGATTTACGAAGTACTTCAGCACCACAATGAGAAAAGAAAGACCTGTTTACACATAGCTTGTGTATTCGACAGGCCGGAGTACATTAGGCCGTTGATTAATTTAGGAACAAACCCAAACATTCAGGACCACAATGGCAACACAGCTCTACACGTCGCTGTGGAAGAAGTGAAAAAGCTGCTGGAAATTGGTGAAGCTTCTACAAAAATCAGTATATCAAAGAACGGCAATAATGTCTTACATTTAGCTGTTGAACAGAACGAGAAAAGTATTGTCCAGTATTTGCttaaaaacacaaatgtgAATATTAATGAGCCGAATACATCCGGTTTTACGGCGCTTGGATTGGCCTATTCAATGGGAAGCGAGGCTAAAGCAGTTGTTCAACTCCTCCTTGAGCATGGGGCTACTTCAGGCCCAAGTAGCAGTGGAAGCAGTGCTTCCCACGATACTCCAATGGACATAGCAGTTACACCAAAGACATCAAATACGGATGAGAGCTCCGAGGAGGAGGATGATAGGCCCTTGCAAATCGATGAATTTAGCATGGAAGACAACGACAAATCAGGATCTCTACTAGATGACGAATGCATCGACCAGCTTACAGTAATATTCGATAAGGACAACAAATGGCGGAAGCtggcaaacattttcaaatttgactCATTCATTGATATATGGAAGACGAAAGATAGTCCATCGCGGAAGATGTTgaactatttaaatGTGTCTAAGATAAAGACACAAGAAATTGTCTCTGCTATGGAACTTCTTAATGAACAGGATGCCGTGAATAAAATTGGTGAAATGTTGAACAGAAAGAAAACTTCTTAG
Protein Sequence
MVEPLDLTEQDEQMLQARDYQEEILERALKQNVIIYLPTGAGKTFIAAMAIKRMSKDLAKPLSEGGKRTVFVTNTVALAKQQCTALQKQTNLKVNVYTGERNVDYWGRDRWDLEFEQTQVIVATCQIIVDIITSGIIKLSNFNLLIFDECHNGTKNHPMHILMGHFRYVPENNHPRIIGLTGILMKSPTIKTVLQELTNLEATFRSVIVTVSNLEKFKNVLLYSTKPNELFIPYSNINYNKSSIYDKITILVEKTKEVALNWKGDETDFEKTKALNDKAEPSPVKNAANLLNDFLYQLNDLGLYGASIGIMTLIISFELRKRSAKTLNMRNTYRMCITMADRIRHLLVKHLYGDDDEEEKEVDVILSNSSPKMQKLLVHLKEKFSGKNPNDISCLVFVQRRSTAKAVYHIVKRFAKVSENIPLKPAFMIGRNRSLSEPITANLTDKWSESAINEFKRGDANFLVVSSVLEEGIDVQSCNYVIRYDRVDNFRSYIQTKGRARSRESEFAMMVEMNDHAKVIQNITKYRQIEEELRKFLIEKAIDRKKPLTEDILKQFPVNVPPLKTSKGAILEAHAALNLLNRYCMSLPGDCFTLFKPKWEKTEYVETNFTNIVAKVTLPPQSTIKEPISSLPMRSVYLAKAHAAFMACVQLYHNGELNDHLLPITPKISNEITDNLYFQHWQEFPEAMVTGEGPKLVILEEPVEKFRFRYKSEMHGTHGSLMGSSNSKSKKTFPTVVFKGYEGRAVIRCSLYQTSDTLVLSPHSHKLVVRHNDIDVCDPHDLRVSKEDGYWAVFQGMGIIHTAKKHIVEELVAKKIREKQFEEGRPLTPLEESTVDVFIQLLRPTDGDVSEPVPFRYKPREFTTSRKRARTNSSGLSSGNIPETVMSVIKNSPQASNSHGFPNKSDVIDEFLGNLDQKVLENSDELFKLFDNSYLEMDSGGKLEKDGASPKVSMKLNSKKLAKLNVHHNSSELLQMQAQMAGPQIQPQIGDSTMMRSGQFYGLKESMDSTYHSYFNKIRSTVRRSEKLDIGKTSADILDIFQIAKSQHNCNLLHDVIREGDNNVMVKLLQLIDRLEIYEVLQHHNEKRKTCLHIACVFDRPEYIRPLINLGTNPNIQDHNGNTALHVAVEEVKKLLEIGEASTKISISKNGNNVLHLAVEQNEKSIVQYLLKNTNVNINEPNTSGFTALGLAYSMGSEAKAVVQLLLEHGATSGPSSSGSSASHDTPMDIAVTPKTSNTDESSEEEDDRPLQIDEFSMEDNDKSGSLLDDECIDQLTVIFDKDNKWRKLANIFKFDSFIDIWKTKDSPSRKMLNYLNVSKIKTQEIVSAMELLNEQDAVNKIGEMLNRKKTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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