Basic Information

Insect: Eustalomyia histrio
Gene Symbol: -
Assembly: GCA_949748255.1
Location: OX456527.1:67278123-67281050[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.77 81 5.4 2.6 2 22 287 307 286 309 0.88

2 10 2.3 2.4e+02 3.9 0.4 6 23 318 335 318 335 0.97

3 10 9.1e-05 0.0095 17.8 3.8 1 23 341 364 341 364 0.98

4 10 0.00022 0.023 16.5 0.6 1 23 374 397 374 397 0.96

5 10 1e-05 0.001 20.8 2.2 2 23 406 428 406 428 0.97

6 10 0.00035 0.037 15.9 0.3 3 23 436 456 435 456 0.97

7 10 2.5e-05 0.0026 19.5 0.2 3 23 466 487 464 487 0.95

8 10 6.4e-06 0.00068 21.4 1.3 1 23 494 517 494 517 0.97

9 10 1.1e-06 0.00011 23.9 0.9 2 23 524 545 523 545 0.97

10 10 0.00034 0.035 16.0 2.3 1 23 551 574 551 574 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.77	81	5.4	2.6	2	22	287	307	286	309	0.88
2	10	2.3	2.4e+02	3.9	0.4	6	23	318	335	318	335	0.97
3	10	9.1e-05	0.0095	17.8	3.8	1	23	341	364	341	364	0.98
4	10	0.00022	0.023	16.5	0.6	1	23	374	397	374	397	0.96
5	10	1e-05	0.001	20.8	2.2	2	23	406	428	406	428	0.97
6	10	0.00035	0.037	15.9	0.3	3	23	436	456	435	456	0.97
7	10	2.5e-05	0.0026	19.5	0.2	3	23	466	487	464	487	0.95
8	10	6.4e-06	0.00068	21.4	1.3	1	23	494	517	494	517	0.97
9	10	1.1e-06	0.00011	23.9	0.9	2	23	524	545	523	545	0.97
10	10	0.00034	0.035	16.0	2.3	1	23	551	574	551	574	0.95

Sequence Information

Coding Sequence: atggATGGCTGTTTATTGTGTTTAGAGATAAATAAGGAATTTGAGGATTGTATTAAAGTCGATTCTATGCAGTGGCTGGAATTAAATGTTCAATCTATTATAGAGAAACATTTCTGGTGTATTgaaatttttaatggttacTCCTCTTTGTGCACAACATGTTGGCAAGAATTGtatgattttcataaattatataaacGCGTAGAAGAGGCCCacataaattttggtaaattgatgaaaattgaAGAGACTCAAGTGTTAGTGGATGAAAAAcatgataattttattaaggAGCTAGATGTAAATCCACATGATTGCAAAGATTTGTTTGATagcaatgtaataaataatccAAATGTCGAAGCAgaagttttaataattaaagaAGAAAATCCATTCGATGATATGATAACAGAAACTGAAAATGATGATAAACCATTAAAGCAAAGGCGAAAGCGTCAATGCACAGTTAAAAATAAGCAGCACCAAAAAGAGTATAAAAGCAATGATCCTTTAaagaaagtaacaaaaaattccaaaggtttgaaaaataaaacgaaaaaagcGCTAAAGCATTTAAAAGAATCAACGAACGAACAAACTACTCTTATCAAATCAGCAACAAATGATGAAGTCGAGGAAGAACTTCCAATAAAAACTGAAACTGAAGTATTAGAAATATCAAAAACTCCAAACATTCCAACAAATTCATTAAACGACGATATTAACTCAAATGATGACAATGATGATGAAACTAACTCACAATCTGATCAAGAagaatctaataaaaataattctaaaaaatccAAATCAAGTTATCATAAAAACGATAAATTTATATcagaaaatattcagttataTTGTCATTTATGCCAAAtacaattcgaaaatttttctcCTCTACTTAAACATTTTCATGACGAACATAATCAACGTGGCTATGCAGTGTGTTGTCAGAGAAAATTTATGCATCGTTCAGATATAGTGGATCACATATATGTCCATAGGAATCCAgaacattttaaatgtaaagtttgTGGTAAAATTTTGGCCGATCGTCATTGTTTAAGAGTACATATGAAAAAGTTACACGAGGGTATAAAAAACCATCAAACAAATTTCGATTGTGAGATTTGTGGTAAAATGTTGGCCAACAAACATGGattacaaatacatacatacacaatgCATGAGGTAACAAAAGATGATAGAGAAACCTGTACAGAGTGCAATAGAACCTTTCGCAATAAACTGTCTTTAAAGAGTCATATTAAAACTGTACATTTGaagaaatatgttaaaatatgcGACCTTTGTGGTATAACTATATCCGACAAGGAACTATTTAAACGTCACATGTTAAAACATGAAGGTAAACCATTGCCCACAATAGCATGTAATATTTGTGGACGCATTTATAcggagaaaaaaagtttaagacgTCATATAAATTTAGCCCATCCAAAAGAAAAGGTTGAATTTAGCTGTAATTTATGTACGAAAAAATTTGCCAGCCAGGATAATGTAAAAAAGCACATTAAAAGTGTACATGAATCAAGTTATGTACAAAAATGTACCGTATGCGAGAAGACTTTTAGAAGACCAGATGCATTAAGGgATCATATGTCTAGACATACTGGAACTCCTTTACATTCGTGTCCTTGGTGCCCCAAGACATTTTATTCAAATGGTCAAATGCATGCTCACCGCAAAGAGCTTCATCCTAAGGAATGGGAGGAATATATACGTGAAAAACATTCCGGAAATTTaccagaaaaatataaattacctGCTGCAAtgcaaataaacaatttttcattaacactttaa
Protein Sequence: MDGCLLCLEINKEFEDCIKVDSMQWLELNVQSIIEKHFWCIEIFNGYSSLCTTCWQELYDFHKLYKRVEEAHINFGKLMKIEETQVLVDEKHDNFIKELDVNPHDCKDLFDSNVINNPNVEAEVLIIKEENPFDDMITETENDDKPLKQRRKRQCTVKNKQHQKEYKSNDPLKKVTKNSKGLKNKTKKALKHLKESTNEQTTLIKSATNDEVEEELPIKTETEVLEISKTPNIPTNSLNDDINSNDDNDDETNSQSDQEESNKNNSKKSKSSYHKNDKFISENIQLYCHLCQIQFENFSPLLKHFHDEHNQRGYAVCCQRKFMHRSDIVDHIYVHRNPEHFKCKVCGKILADRHCLRVHMKKLHEGIKNHQTNFDCEICGKMLANKHGLQIHTYTMHEVTKDDRETCTECNRTFRNKLSLKSHIKTVHLKKYVKICDLCGITISDKELFKRHMLKHEGKPLPTIACNICGRIYTEKKSLRRHINLAHPKEKVEFSCNLCTKKFASQDNVKKHIKSVHESSYVQKCTVCEKTFRRPDALRDHMSRHTGTPLHSCPWCPKTFYSNGQMHAHRKELHPKEWEEYIREKHSGNLPEKYKLPAAMQINNFSLTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00893070;
90% Identity: -
80% Identity: -