Ehis016624.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eustalomyia histrio
Gene Symbol
-
Assembly
GCA_949748255.1
Location
OX456523.1:247707693-247713343[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.16 17 7.6 1.3 1 23 258 281 258 281 0.91
2 25 0.00027 0.028 16.3 1.1 1 23 287 310 287 310 0.97
3 25 0.00024 0.025 16.4 1.5 2 23 341 362 340 362 0.97
4 25 2 2.1e+02 4.1 4.1 1 23 438 461 438 461 0.92
5 25 0.12 13 7.9 0.3 2 23 469 490 468 490 0.97
6 25 0.00016 0.017 17.0 0.8 2 23 536 557 535 557 0.97
7 25 0.022 2.3 10.3 1.2 2 20 570 588 569 591 0.94
8 25 0.0038 0.4 12.7 2.6 1 23 668 691 668 691 0.93
9 25 0.00057 0.06 15.2 0.4 1 20 698 717 698 719 0.95
10 25 0.63 66 5.7 0.4 2 23 731 753 730 753 0.94
11 25 0.0005 0.052 15.4 0.4 2 23 768 789 767 789 0.97
12 25 1.8e-06 0.00019 23.1 1.7 1 23 795 817 795 817 0.98
13 25 9.8 1e+03 1.9 5.3 1 23 972 996 972 996 0.95
14 25 0.33 35 6.6 0.9 1 23 1033 1056 1033 1056 0.90
15 25 4.7e-05 0.0049 18.7 2.8 1 23 1070 1093 1070 1093 0.96
16 25 0.002 0.21 13.5 3.4 1 23 1100 1122 1100 1122 0.97
17 25 0.0038 0.4 12.6 0.1 2 20 1149 1167 1148 1168 0.94
18 25 0.0017 0.18 13.8 4.0 1 23 1227 1250 1227 1250 0.98
19 25 0.18 19 7.4 0.5 1 23 1287 1310 1287 1310 0.97
20 25 0.14 14 7.8 6.1 1 23 1343 1366 1343 1366 0.97
21 25 8.4e-07 8.8e-05 24.2 0.8 2 23 1396 1417 1395 1417 0.95
22 25 3e-06 0.00032 22.4 1.2 1 23 1423 1445 1423 1445 0.99
23 25 2.9e-06 0.0003 22.5 2.9 1 23 1451 1473 1451 1473 0.99
24 25 1.4e-06 0.00015 23.5 1.6 1 23 1479 1501 1479 1501 0.99
25 25 0.045 4.8 9.3 1.1 1 22 1507 1528 1507 1531 0.90

Sequence Information

Coding Sequence
atggACAGAgtgaaaaagtgttttattaatGGAGTGGAGTATAAATGTCGTACCTGCTTTGATCCAGGGAGTAATGTCTACTCCCTCACCAGGGAGTTTACCAAAACTAAATCATGGCGAGATTTATTAATAGAAATAGTTAAATTACAaATGTCTGATGATGATTTATTGCCAAATACTCTGTGTTGCAAATGTTCTGTTCTTCTTCAAGGTGTCTATGATTTCATAGAGCAGGCTCATAGTGTGAACAAGAAATATATGCGATTATTAAATAAAGACCCTAATCCCCCTCAAGATTGTGGATCAATTGAACCTGATTTATTTTCTGATTGTTTAGAGGAGTCTGCCATTGATATACCATTGGATCAATACATGCCTGAAGTAAAATTGGAAGAAGATACTGTTGATCAGTATAACATTGTATTGTTGGATAAACTTGCAGAGCGTGATAGTAATGGAACTAAGATGGAAAATGAAAACGAAGgcgAACCGGATTCCTTATTTTTGAAAGATTGTATACAAGAATCCATTGAAATGGATGAAAATAAACAACCTTACACTAGAACAAAATCCTTACAAGAACACAGTCTAGACGAAAATGCTTTTAATGATCATCATAACATTGATGGCAGcttttCATCTTCCAATGAAAGTGATTATCTGCCGCTTAAGCGAATTAAGAAGGAAAACAATAGCAAAACTCCAGTTAAACGTAAAATTGGTCGTCAAGCTCCAGATTATTATGATAAAATCCAAAAAGTTAATGATCGTTTTGTTTGCCTAATATGCCAGAAAACATTTTCCCTGCGTAAAGACTGTGGCCGCCATATAGCCTCCATACATTTGAGACAAACAAAATATCCCTGTGAATTTTGCGGTCAAAATTATAGTCGCAAGGACAAAGTACGGCAACACATTAAACGCATGCATTCCGATAGACCAGTCTATCCAAAAACCAAACGTAAAGAGTGGATATTTGGTGATCGTCTCTATAGTTTACCTACTGCCTGGCAGCTGGTAGAATGTAAAttgtgtaatacaaaatttagcaCCACCAAAGACTTAAGAACACATTTGGAAACTCATGCCAGTACcgaaacattaaataatttacaattaacGAGTGAAATTGTGCAACATTTGTTCACAAACTTACTGGACATTAACATTATTAGGGAAAGCATATGCAAGGATATTAAGGAGAAACATTGGTTTAAATATTATGCAGTATTAAATGAATATTCCTATGAAATGTCTATTAGTGATACAGAATTAGAAGATTTGGAAAACGAACGAGAAGACTGCATTAAATACAAATGTGAATTGTGTGCACAAACATTTTCGTTTAAACATCagatgttttttcatttaaaacaagtCCACAGTAAGGATGAAGTCTCCTTAAAATGTGGTCTATGTAAATTAGAATTTATATCGGCCCAAATGTATGAACAACATTCCCAAACACATTGTCGAAATAAAAGTAAAGTATTGCTTTGTACACGATGTCCGGCAAAATTTGTTTGGccagaaaatatgaaaaatcataATTGTGCCACAAAATTGGTGGAATCTCCACCAGCTCGTCCAACAAAAGATTCCCTAAAATGCAATATTTGTGAACGTGCATTCGAGGTTAAGACTAAACTACAAAAGCATTTGCAATCTCATAACCAGGGTGCTAAGACTGCTACAAAAACCATTATACGTTGTGGCCTTTGTTCGCAATCATTTGAGAAACTCAAGCATTTGCGTACACACATGCCGCTGCATTCTGACGGCACGTCTGGTATAGATTTAAAGAacagtatttattttaagagaTTTGAAAGATCTAAAACTCCTGATCATACTCTATTACAGCAAGAGATACAAAACGGTTACAAGAAATCTCAAATCAGTAGATTCTATAGAGCAATTGACAAAGAAGGTAATGAAATGGATATTATGGATTCAGATAGTGAACCGGATGAAGACTGTAATGTTGATGTGAAGGCCGAATACAAATGTGAACTTTGCCATGTGGGTTTTAAACGAAGGAAATTGTTACTGCAACATCAAACTGATCAGCATAATGATGTACCTCTGCCATTTACGTGCAATGACTGTACAAAACAATATGTGAGTAAAGATTTATTACAACAGCATTTGGTGAGAGATTGTTGGAATGAACACCGTCGTGTAGCTCAACAATGTGAATTTTGTAATGCCCGTTTTATATGGTCAAATAATTTAGTAAAACATAAAGAAATACAGCATAAACATCAAAAACAACCAAGACCACAACGTGCAAGTACATTGAAGTGTGAATATTGCGAAAAAGTTTTCATCTGGCCGAAAGACTTGGTGCGTCACCGCAAAACTCACACTGAGGGTAAAAAGTTCTCCTGCCCCCATTGTGAACGTAAATTTCAACGCAAAGATAATTTACTCGCCCACATTCGTATACACGATCCTGACGGTACTCCAACGGTATCAAATTCAAGCAAAACGGTAGATTACATACTGCCACATTTAATAAAACCTCATGGTTGTAAACGAATCAAATGTATGATCTGCTATTCGGAACACAATCGTATACGTGACTTACGTTCACATTTGCGATCTCATCgatatttaatcaattttgaAAAGCGTAAAGAAACCGAGCCTGTTGACTATATATCCACACAGCTATATCCTGAAGATCCTGGCATGCCTGAAGAGGAATTAATAAAACGTATTGGTTTGGATATTGCCGCTGAAAATAATCTAGAACGTTTTTATTCTATTACCAATGAAAATGGTTATGAAGTTAGTTTGGATAGTTCCGAAACAGAAAGCGATTCCGATGATAATGATGCTGAAGTGGACAGTGATTGCAATATGGACGAACATGTCGTTAAAGCTGAATTAGATAAACCTAAACGTATTTATAAATGTGATTTATGTCCTCAACTAGGTTTTAATcgtaaatataaactttatgaTCATCACCACAAGACTCATACTTGGGAAGAGGCTCGTCATATTTGTATACATTGTAATGGACGTTTTCTGTCAGCATATATGCTACAATTGCATTATAAAAAGCActgtaaaaattccaaaaaacgaCACATTTGCCGCCGTTGTCCTTTAAGATTTGTATGGAAAAGTAATCTTAAGGCTCATTTTGTAATGGATCATGCACATGAAGTTGCCAAAGAGGTCGAAGTTAACCGTTGTTTCGAATGTTTTCTAtgtcaaagaaaattttctcaacAACGAGATCTAACGCGTCATATGACATCAAATCATTCGGCAGATTCCGAAGTTCATTATTGTTTACTATGTCCTAAAACCTTTTACGGCAATGAACACTTAAATGATCATTTAAATCGACACCGTTTAACAGTGGACGACATTAATAGTGTCGAAAGCATTATACATTCTACTTGCTGGCCAAATGGTGACAAAATTATCAAATGCAAAATATGTGGTTTGGAATTTTCTAGTATGACAAATTTATCCGAACATCTTTCACCCACGAATCCACATAATTTGTGCGCTGTGCAGGATTCACCAAATAGCAATTATTATTCAATAACAAATCACAAAGGATTCGAATTACATTTGGAACTAGATTCAGATACGGATACAGAAGATATGATACATACTAATGAAGACGAACCTTCCCATAAGGAAAACTATTATCCGTACACCTGTTCATTGTGTAATGTGTCATGTAAACGGAAATATCAAATGGCTCAACATCAACGTTCCATGCATAATTATGAAGGACTTTTATTGAAATGCGAAAATTGCATATTTAGGACCGTGTGTCagaaaattttggattacCATAAAACCACTCAATGTTTCAACACCGAAAAACAGTATAAATGTGTTCGCtgtaaatttaagtttatgtgGCAAGAAAATCTTGAAAGTCATATCGCCATGCTGCATCCCCCCAAGGATAATGTCAAAATACAAGATGAAGAACCAGCTGACTCTAAACCGTTGGACAAACTTGGGTCTTCTAATAAAAATGATCCCAATATATTCGAATGTATGGACTGTCATCGTCGTTATAATCGTAGAGATCGTTACAAGGctcattttaagaaatttcacaATAACGATGCAGCAGCACCCTCTGGCGGCAATGCTTCATACACTAAAGTTCGCAAGCAAGCCATACCCAAAAaagataaaaactttttatgcgCTTTTTGTGGTCTTTCATTTTCTAATAATTCAAATCTTACTGTTCATATGAGACGCCATACAGGAGAAAAACCATTTAAATGTGACCTCTGCGATATGGCTTTTCCACGCTCATCAGATTTACATGCTCATCGTCGCACTCATACCGGCGAAAGGCCGTACAAGTGCATGTATTGTGAAAAATCTTTTTCGCggcaatataaattaaatgtccaTACACGTATTCACACCGGTGAACGTCCTTATCAGTGTACATATTGTGAGAAGAGTTTTATTCAATCAAATGATTTAACACTGCACCTTCGTCGTCATACTGGTGAGAGACCATATATGTGTGATATTTGCGGGGAAGGCTTTATATGTGCCACCTCATTAAAGCAACATCGCAACTCTAAGAGTCATTTGgaaaataatacacaattagACGAGCGTTTACCAAATGCACCACATTTCGAAATGAATTTTTAA
Protein Sequence
MDRVKKCFINGVEYKCRTCFDPGSNVYSLTREFTKTKSWRDLLIEIVKLQMSDDDLLPNTLCCKCSVLLQGVYDFIEQAHSVNKKYMRLLNKDPNPPQDCGSIEPDLFSDCLEESAIDIPLDQYMPEVKLEEDTVDQYNIVLLDKLAERDSNGTKMENENEGEPDSLFLKDCIQESIEMDENKQPYTRTKSLQEHSLDENAFNDHHNIDGSFSSSNESDYLPLKRIKKENNSKTPVKRKIGRQAPDYYDKIQKVNDRFVCLICQKTFSLRKDCGRHIASIHLRQTKYPCEFCGQNYSRKDKVRQHIKRMHSDRPVYPKTKRKEWIFGDRLYSLPTAWQLVECKLCNTKFSTTKDLRTHLETHASTETLNNLQLTSEIVQHLFTNLLDINIIRESICKDIKEKHWFKYYAVLNEYSYEMSISDTELEDLENEREDCIKYKCELCAQTFSFKHQMFFHLKQVHSKDEVSLKCGLCKLEFISAQMYEQHSQTHCRNKSKVLLCTRCPAKFVWPENMKNHNCATKLVESPPARPTKDSLKCNICERAFEVKTKLQKHLQSHNQGAKTATKTIIRCGLCSQSFEKLKHLRTHMPLHSDGTSGIDLKNSIYFKRFERSKTPDHTLLQQEIQNGYKKSQISRFYRAIDKEGNEMDIMDSDSEPDEDCNVDVKAEYKCELCHVGFKRRKLLLQHQTDQHNDVPLPFTCNDCTKQYVSKDLLQQHLVRDCWNEHRRVAQQCEFCNARFIWSNNLVKHKEIQHKHQKQPRPQRASTLKCEYCEKVFIWPKDLVRHRKTHTEGKKFSCPHCERKFQRKDNLLAHIRIHDPDGTPTVSNSSKTVDYILPHLIKPHGCKRIKCMICYSEHNRIRDLRSHLRSHRYLINFEKRKETEPVDYISTQLYPEDPGMPEEELIKRIGLDIAAENNLERFYSITNENGYEVSLDSSETESDSDDNDAEVDSDCNMDEHVVKAELDKPKRIYKCDLCPQLGFNRKYKLYDHHHKTHTWEEARHICIHCNGRFLSAYMLQLHYKKHCKNSKKRHICRRCPLRFVWKSNLKAHFVMDHAHEVAKEVEVNRCFECFLCQRKFSQQRDLTRHMTSNHSADSEVHYCLLCPKTFYGNEHLNDHLNRHRLTVDDINSVESIIHSTCWPNGDKIIKCKICGLEFSSMTNLSEHLSPTNPHNLCAVQDSPNSNYYSITNHKGFELHLELDSDTDTEDMIHTNEDEPSHKENYYPYTCSLCNVSCKRKYQMAQHQRSMHNYEGLLLKCENCIFRTVCQKILDYHKTTQCFNTEKQYKCVRCKFKFMWQENLESHIAMLHPPKDNVKIQDEEPADSKPLDKLGSSNKNDPNIFECMDCHRRYNRRDRYKAHFKKFHNNDAAAPSGGNASYTKVRKQAIPKKDKNFLCAFCGLSFSNNSNLTVHMRRHTGEKPFKCDLCDMAFPRSSDLHAHRRTHTGERPYKCMYCEKSFSRQYKLNVHTRIHTGERPYQCTYCEKSFIQSNDLTLHLRRHTGERPYMCDICGEGFICATSLKQHRNSKSHLENNTQLDERLPNAPHFEMNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00892984;
90% Identity
-
80% Identity
-