Basic Information

Insect: Eustalomyia histrio
Gene Symbol: -
Assembly: GCA_949748255.1
Location: OX456526.1:31608802-31634971[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1e-05 0.001 20.8 1.3 1 23 604 626 604 626 0.97

2 18 0.00019 0.02 16.7 0.5 1 23 632 654 632 654 0.97

3 18 8.5e-05 0.0089 17.9 0.6 1 23 660 682 660 682 0.98

4 18 6.4e-06 0.00067 21.4 3.0 1 23 688 710 688 710 0.97

5 18 8.5e-05 0.0089 17.9 4.7 1 23 716 738 716 738 0.99

6 18 0.00015 0.016 17.0 5.7 1 23 744 766 744 766 0.97

7 18 7.3e-07 7.7e-05 24.4 4.3 1 23 772 794 772 794 0.98

8 18 2.7e-07 2.9e-05 25.7 2.4 1 23 800 822 800 822 0.97

9 18 0.00016 0.017 17.0 6.7 1 23 828 850 828 850 0.97

10 18 0.00028 0.029 16.2 6.5 1 23 856 878 856 878 0.98

11 18 2.5e-05 0.0026 19.5 4.5 1 23 884 906 884 906 0.98

12 18 9.2e-05 0.0097 17.7 8.3 1 23 912 934 912 934 0.98

13 18 4.6e-06 0.00048 21.9 7.7 1 23 940 962 940 962 0.98

14 18 1.6e-06 0.00017 23.3 7.7 1 23 968 990 968 990 0.98

15 18 0.00051 0.053 15.4 9.5 1 23 996 1019 996 1019 0.95

16 18 0.00043 0.045 15.6 0.5 1 23 1025 1047 1025 1047 0.97

17 18 0.00062 0.065 15.1 4.5 1 23 1057 1079 1057 1079 0.98

18 18 2.2e-05 0.0024 19.7 1.6 1 23 1085 1108 1085 1108 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1e-05	0.001	20.8	1.3	1	23	604	626	604	626	0.97
2	18	0.00019	0.02	16.7	0.5	1	23	632	654	632	654	0.97
3	18	8.5e-05	0.0089	17.9	0.6	1	23	660	682	660	682	0.98
4	18	6.4e-06	0.00067	21.4	3.0	1	23	688	710	688	710	0.97
5	18	8.5e-05	0.0089	17.9	4.7	1	23	716	738	716	738	0.99
6	18	0.00015	0.016	17.0	5.7	1	23	744	766	744	766	0.97
7	18	7.3e-07	7.7e-05	24.4	4.3	1	23	772	794	772	794	0.98
8	18	2.7e-07	2.9e-05	25.7	2.4	1	23	800	822	800	822	0.97
9	18	0.00016	0.017	17.0	6.7	1	23	828	850	828	850	0.97
10	18	0.00028	0.029	16.2	6.5	1	23	856	878	856	878	0.98
11	18	2.5e-05	0.0026	19.5	4.5	1	23	884	906	884	906	0.98
12	18	9.2e-05	0.0097	17.7	8.3	1	23	912	934	912	934	0.98
13	18	4.6e-06	0.00048	21.9	7.7	1	23	940	962	940	962	0.98
14	18	1.6e-06	0.00017	23.3	7.7	1	23	968	990	968	990	0.98
15	18	0.00051	0.053	15.4	9.5	1	23	996	1019	996	1019	0.95
16	18	0.00043	0.045	15.6	0.5	1	23	1025	1047	1025	1047	0.97
17	18	0.00062	0.065	15.1	4.5	1	23	1057	1079	1057	1079	0.98
18	18	2.2e-05	0.0024	19.7	1.6	1	23	1085	1108	1085	1108	0.96

Sequence Information

Coding Sequence: atgaatactGATCATGCAATTGCGAATGCAACAACTCCTGGTGAGTCAGCAACAACGTCAGCAACATTATCAAATACTACAACGACAACAGTATCGGCTACAACATCTTCCAATGGATATGATGCACAACAGCAACATAATCGGCATTCGCCATTGCAACAGCAACAACCACAATTAAATGAGtCACGTGGGATTTTAACTGTTGTACAGCCAACGTTTACATCTCAACAATATATGTCTTCGCCGAATATTAATAGGCAAAATATTGGTATAAACCATATACCACAATCACCCATACCTTTAATTTCAACGGCTTCGTTAAATGTATCAACAACTGCATCGCCGCCATCAACAATTGTTGttgatcataaaaatgttttaacgcaTCAAACTATAACAACATCAAATCCGCCAACACCAACTGCTGCTACGGATGTTGCTACTAGTTCAGTTGCACCATCAGTTAACACAACATTGGTGGGTGCACATGATCAACAACATTTACAGCATAATCACCACCAtcagcatcatcatcagcagcatCATGTTAATCAAGCGACGAGTACCTCAGTATTGGTTACTTCAACTGGTGCAGCGTCAACGGATACCCTATCGCCATCAACAACAACCCTTTTAGACAGTAATACACAAAATttgGGCAAATATTGGGTAGTaactacaaatttatttcaaggaGGCCCAAATCAGGCTGCTGCATATAACGAGGTAGTAAGTCATACCCAAACATCTATAGCCGGTGTGCCTTCATCAACTTTGGTACGTGCAATATCCACAACTGCGGGCAGTGGAACAGTGGTAACAAAAACTGAAGCAGCTACTAGCAGCAGTGCAGGTACACTGCAAATACCACAAACGCAAATGTTGTCACAGGCTGCGATAGGACAACAATTGCCAAATGGCACAATAATAACAACTCAggcacagcaacaacaacaacagcagcagcaacaacaacaaagacaTGTTGCAGAacatcagcagcagcagcaacaacagcagttGCATGTTCAAGCTTTAAACAATGCCGAAGAAAAtcgtcaacaacaacaacaacagcagcaacaaatatcccaacaacaacaacaacatgttGCTGTTCTACAAACAGCCGATacaataaaagaagaaaaacccTTTGCTTCAAATGGTAAAATAATGGCTACAAACCAACAGATTATTATGCAACACATATCATCAGCTTCATCTATAACTCCGTCTACTTCTGGAGCTACAACCATTACATTAGGTACACCCAAGACAGAAGTCAAAGATGATGGCAGTGTTGTTATGAGCGGAAAATTACATCCTGGCATTGAAATGTATAAAGTTAATATTGATGATATATCCCATCTATTTACATATCATGaggtatttggtaaaatacatGGAGATGTTATGAATCATCCATTAGCGCAAGCACATGCTTCCTTACCAACAGTTTCTACTAATAACATAGCTACAGCTGTTTCCACTACTACCACTAGTCCAACGGATACGTCTACAGGAGGCGTTACTGTGGTGACAAACAGCAGTGCACCTAATACTGAATCGATCAGTACAAGCACAGCAGGAGGTGGCGGTGGCGGTGGTACTGGTGTTGTAGCTACTACAAGTACAGCCAATTTAACAACTGCCATAGCTAATACAACCGCAACAGCTACCACAACATCTGGAGGGATCACTGGTGGTGTCGGCTTGTTAATGCCGAAAATGGAAGGTGGCATTGCAAATGTAGAACAGAACACCGTAACGGTAGCACCTGATGGTACTATCGTCTCTACAGGTGAACATGTTTGCGATATTTGCGGTAAAATGTTTGCATTCCGCTATCAATTAATTGTACATCGTCGCTATCACACCGAACGAAAACCGTTTAATTGTCAAGTCTGCGGCCAGGGTTTCTTTACCTCACAAGATCTAACACGTCATGGCAAAATACATATTGGTGGTCCTATGTTTACCTGTTTAGTATGTTTTAATGTTTTCGCCAATAATGCCTCTTTGGAACGTCATATGAAACGTCATTCGACGGATAAACCATTTGCCTGTACCATATGTCAGAAAACATTTGCACGTAAAGAACATTTGGAAAATCATTTTCGTTCACACACCGGAGAAACACCATTTCGATGTCAATACTGTGCTAAAACATTTACACGTAAAGAGCATATGGTTAATCATGTACGCAAACATACGGGAGAGACACCACATCGCTGTGACATTTGTAAGAAATCATTTACCCGTAAGGAACATTATGTTAACCATTATATGTGGCATACTGgtCAAACACCTCATCAATGTGAAGTGTGTGGTAAAAAATATACACGTAAAGAACATTTAGCAAATCATATGCGCTCCCATACGAATGACACTCCATTTCGTTGTGAAATTTGTGGCAAAAGTTTTAGTCGTAAAGAACATTTTACCAATCATATACTATGGCATACAGGAGAAACACCCCATCGCTGTGATTTCTGTTCAAAAACGTTTACACGTAAGGAACATTTGTTAAATCATGTACGTCAACATACTGGAGAATCGCCACATCGTTGCTCATATTGTATGAAGACGTTTACGCGCAAAGAACATTTGGTCAATCATATACGTCAACACACCGGCGAAACACCCTTTAAGTGTACTTATTGCACCAAAGCCTTTACACGCAAGGATCACATGGTTAATCATGTGCGTCAACATACTGGTGAATCACCACATAAATGTACATTCTGTACAAAAACTTTTACGCGCAAAGAACATTTAACGAATCATGTGAGACAACATACCGGAGAATCACCACATCGTTGCAGCTAttgcaaaaaaacttttacacgcAAGGAACATTTAACAAATCATATACGTTTGCATACTGGAGATTCGCCCCACAAGTGTGAATATTGTCAAAAGACATTTACACGCAAGGAACATCTTAATAATCATATGCGTCAACATTCTAGTGATAATCCGCATTGTTGTAATGTTTGTAATAAGCCTTTTACGCGCAAAGAACATTTAATAAATCACATGTCTCGCTGTCACACTGGAGATCGGCCATTTGCATGCGAAACTTGTGGAAAATCTTTCCCTCTTAAGGGTAATTTATTGTTCCATCAACGTAGTCATACTAAGGGTCAAGAAATGGAACGACCATTTTCGTGTGAAAAATGCCCCAAGACATTTATTtgcaaaggACATTTGGTATCTCATATGCGTTCTCATTCCGGCGAGAAACCACACGCTTGCACTTTGTGCAGTAAAGCATTTGTGGAAAGAGGAAATTTGAAACGTCACATGAAAATGAATCACCCAAATGCTCCTATGCCACCACCTCCAGTGCCACATCCAGTTATACCAGCGGGAGTTTTGCCTCAAATTAAACAAGAAATTAAACCAGTTATAAGTGAATTAATCAAAGACTTAAATGGTCTTTCAAAAGGTGTAAAAGTAAAATCATATCAAGCATCATTACAACAGTGTATTCATCACTATGATGATGTTTCATCTAGAGCTAAAAAATCATTAGACTTTATAAAAATCGCTAGAAGTCATGTCAAATGA
Protein Sequence: MNTDHAIANATTPGESATTSATLSNTTTTTVSATTSSNGYDAQQQHNRHSPLQQQQPQLNESRGILTVVQPTFTSQQYMSSPNINRQNIGINHIPQSPIPLISTASLNVSTTASPPSTIVVDHKNVLTHQTITTSNPPTPTAATDVATSSVAPSVNTTLVGAHDQQHLQHNHHHQHHHQQHHVNQATSTSVLVTSTGAASTDTLSPSTTTLLDSNTQNLGKYWVVTTNLFQGGPNQAAAYNEVVSHTQTSIAGVPSSTLVRAISTTAGSGTVVTKTEAATSSSAGTLQIPQTQMLSQAAIGQQLPNGTIITTQAQQQQQQQQQQQQRHVAEHQQQQQQQQLHVQALNNAEENRQQQQQQQQQISQQQQQHVAVLQTADTIKEEKPFASNGKIMATNQQIIMQHISSASSITPSTSGATTITLGTPKTEVKDDGSVVMSGKLHPGIEMYKVNIDDISHLFTYHEVFGKIHGDVMNHPLAQAHASLPTVSTNNIATAVSTTTTSPTDTSTGGVTVVTNSSAPNTESISTSTAGGGGGGGTGVVATTSTANLTTAIANTTATATTTSGGITGGVGLLMPKMEGGIANVEQNTVTVAPDGTIVSTGEHVCDICGKMFAFRYQLIVHRRYHTERKPFNCQVCGQGFFTSQDLTRHGKIHIGGPMFTCLVCFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLENHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCSYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQEMERPFSCEKCPKTFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPNAPMPPPPVPHPVIPAGVLPQIKQEIKPVISELIKDLNGLSKGVKVKSYQASLQQCIHHYDDVSSRAKKSLDFIKIARSHVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01236968;
90% Identity: -
80% Identity: -