Eaur005461.1
Basic Information
- Insect
- Euspilapteryx auroguttella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951802225.1
- Location
- OX637644.1:14478456-14499629[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.7e-73 2e-68 231.4 23.4 1 261 105 363 105 384 0.89 2 4 0.3 7.7e+03 -3.6 8.4 1 59 386 447 384 482 0.67 3 4 0.11 2.7e+03 -2.2 0.6 210 240 512 546 496 572 0.58 4 4 0.17 4.3e+03 -2.8 5.6 134 163 592 621 546 633 0.49
Sequence Information
- Coding Sequence
- ATGGGCAATCACTCGCAACTTGTCACGTCTGATAACAGCGACGACGACAGCGGCGAAGCCTTCACTGATGGTGACTTCGAAGACTCTGATGACGAGAACACCATCATTGAAAGGGCTGATCACAATAATTGCATACCAGTCAATGAGACTGTTAGTCCACAAGTGATTTACGAGAACGGAGTGAACGGACACGATAGCAGTATGCCTGGACACACCAACGGAGTGAAGGAGGAAGCCTCGGAGATAAGGAGAGACTCGCACGGAGACCAGAACCCTTCGATAGTTGGCATCATCGGTGACCAGCATAATTATGCGGAACAGCGTCTAGCGGCGCGTCGGGCGGCACGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTGGAGCGGCAGCAGCGCGAGCAGGAGAACAATGCCGACAAGGCCTACGATATGTATGCTGAGACGGTgtcgcggcgcggcgcgccccGGCTGTCCGCCACCATGAGCCCCGCGCTGCTCACGCCGCGGCGCAGCTCCGAGGATTCCATGGACGAGCCCTTCAGTCTCAAGGATCTCAGGCACGAGCTGAAAGAGGTAGAAGAGAAGTTCAGGAAGGCGATGATCCTGAACGCCCAGCTGGACAACGACAAGGCGGCGCTTGGTTACCAACTGGAGCTGATGAGGGACAGGCTTGAAGAGCAGCTGGAGGAGACTGCGCAGTTGCAGAGAGAACACAAAGAGAAATGCTCGGCGCACGAGCGTTTAAAACGCGAGCACGCCTCCGCGGACCGCGAGCTGCGGGCGGCGCGGGACGCGGTGCGCGCGCgggacgccgccgccgccgcctcggGCCGGGTGTTCGTCGAGGCCAGTCCTGAGGCCTGTCCTGAGCTGGCCGAGTACGCGGAGGGCTTCGGCTCTGTCCCACCCCTAGCGCTAGTCAGTCACGAGTCTGAGAAGCTGCTGAATGAAGCTGGTGAAGGGACACTGGACGTCCGGTTAGAGAAGCTGGTGTCATCTCGCGCGGCTCTGGAAACAGAATTAAGGAAGTTAAAGTTGCAGCTGGGAGAAGAGCGCGCGGCCAGGAGCAACGGAGCCGCCGAGCCGCGCGACGAGGAGCTGGAGTTGTGCCGCAAGTCCCTATCGGAGGCGAAGGGtcgcgcggcgcgcgcggagGCGGAGGCGGCGCTGCAGGGGGCCGCCGTGGCGCGGCTCGAGGCGCAGGTGGCGCGGCTGCGCGCGCGGCAGGGCTCCCAGGACGAGCGCGAGGAGCAGCTCAACGTGGAGCGTCGCCGGCTGCAGCGCGAGGTGAGAGGGGGGGAGGCTGCGGGGAGCAGCACGAGCGCGAGGAGCAGTTCAACGTGGAGCGTCGCCGGCTGCAACGCGAGGGGGGGAGGCTGCGGGGAGCAGCACGAGCGCGAGGAGCAGTTCAACGTGGAGCGTCGCCGGCTGCAACGCGAGGTGAGGGGGGGAGGCTGCGTGGGGCAGGTCGAGCGGAGGGGGGGAGGCTGCGGGAGGCAGGACGAGCGCGAGGAGCAGCTCAACGTGGAGCGTCGCCGGCTGCAGCGCGAGGTGAGAGGGGGGGGAGGCTGCGGGGAGCAGGACGAGCGCGAGGAGCAGCTCAACGTGGAGCGTCGCCGGCTGCAGCGCGAGGTGAGAGGGGGGGGAGGCTGCGGGGAGCAGGACGAGCGCGAGGAGCAGCTCAACGTGGAGCGTCGCCGGCTGCAGCGCGAGGTGAGAGGGGGGGGAGGCTGCGGGGAGCAGGACGAGCGCGAGGAGCAGCTCAACGTGGAGCGTCGCCGGCTGCAGCGCGAGACGCGCGAAGCACTCAACCGGGTAGAAGAGCTAGAAACGGAAAACAGCCATTTAACAAAACGACTAGACAAATTGAAGAACGCCAAGTCTGCGCTGCTGAAGGACCTGTGA
- Protein Sequence
- MGNHSQLVTSDNSDDDSGEAFTDGDFEDSDDENTIIERADHNNCIPVNETVSPQVIYENGVNGHDSSMPGHTNGVKEEASEIRRDSHGDQNPSIVGIIGDQHNYAEQRLAARRAARAEAREIRMRELERQQREQENNADKAYDMYAETVSRRGAPRLSATMSPALLTPRRSSEDSMDEPFSLKDLRHELKEVEEKFRKAMILNAQLDNDKAALGYQLELMRDRLEEQLEETAQLQREHKEKCSAHERLKREHASADRELRAARDAVRARDAAAAASGRVFVEASPEACPELAEYAEGFGSVPPLALVSHESEKLLNEAGEGTLDVRLEKLVSSRAALETELRKLKLQLGEERAARSNGAAEPRDEELELCRKSLSEAKGRAARAEAEAALQGAAVARLEAQVARLRARQGSQDEREEQLNVERRRLQREVRGGEAAGSSTSARSSSTWSVAGCNARGGGCGEQHEREEQFNVERRRLQREVRGGGCVGQVERRGGGCGRQDEREEQLNVERRRLQREVRGGGGCGEQDEREEQLNVERRRLQREVRGGGGCGEQDEREEQLNVERRRLQREVRGGGGCGEQDEREEQLNVERRRLQRETREALNRVEELETENSHLTKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -