Eher061811.1
Basic Information
- Insect
- Euschistus heros
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_003667255.1
- Location
- RCWM01000174.1:1924599-1926712[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-38 1.6e-33 119.1 6.5 152 300 2 148 1 148 0.87 2 2 0.043 2.7e+03 0.1 2.3 209 233 192 215 149 221 0.49
Sequence Information
- Coding Sequence
- ATGAAGAGGGATTCGGAGAAACTTGCTAAAGACCTCCAGCTGGCGATGGCTGCTCTGGAAGAACGTGACAGGCTCATTCAAGAACAAGGCCTGGTGATCGTGGGAGGTGATGGTTCGTCTTCTGATGTTTCTTCAGAAGATGAGGGTGACGAAAAGCCTAACAAGAGGCGAGGGGAAAAGCGAGCTCTCGTCTCTGCCGAGGGCGCTGACCTCCTAGCTACTGTTTCTGGATCTCTAGATGTACGATTGAAGAAACTAGCTGCCGAGAGGAACGAACTATCTGACGAACTCCGCCATGTTAAACTTGAGTTGGAAGAGGAGAGGAATCGAGGGAGAGGCCTAGGGGCAAACCCTGCTGATCTTGAAGATATACAGAGAGAAGCTAACAAACAACTGGGCgatttgaaattcaaattacaaaaaGCAGAGCAGGACGTTTCAACGTTGCAAGCAACGgtgGCCAGGCTCGAAGGCCAGGTTACCAGGTACAAGACAGCTGCTGAAGCCGCAGAGAAAGTGGAGGACGAACTTAAACTAGAAAGGAGAAAGCTACAACGAGAAGAATGCCAGGCAAGAGTTGAGGAACTGGAGACAGCGAATACTCACCTTCAGAGAAGGTTAGACAAACTGAAGACTGCCAAGTCAGCATTACTCAAAGACTTGTAG
- Protein Sequence
- MKRDSEKLAKDLQLAMAALEERDRLIQEQGLVIVGGDGSSSDVSSEDEGDEKPNKRRGEKRALVSAEGADLLATVSGSLDVRLKKLAAERNELSDELRHVKLELEEERNRGRGLGANPADLEDIQREANKQLGDLKFKLQKAEQDVSTLQATVARLEGQVTRYKTAAEAAEKVEDELKLERRKLQREECQARVEELETANTHLQRRLDKLKTAKSALLKDL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -