Eher061810.1
Basic Information
- Insect
- Euschistus heros
- Gene Symbol
- Lrrfip1
- Assembly
- GCA_003667255.1
- Location
- RCWM01000174.1:1904776-1924573[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-40 6.4e-36 127.0 12.1 1 114 3 112 3 117 0.94
Sequence Information
- Coding Sequence
- ATGAAGGCTGAGTCGCGTCTGGCGGCGAAGAGGCAGGCCCGAGCGGAGGCGAGGGAGATCCGGATGCGAGAGATCGAGCGGCAGCAGAAGGAGCAGGATGAAGCCAGGCAGACCTCAGCCCCGATCTACGAGATCGATGGGCTAAGAGGCGGGAGACTTAACAGCAGTAGCGGCCGCCTATCAGCGTCTAATAGTTACCATTCGTCAAGAAGAAGTTCCGAGGACTCGCTTGAGGAAACATCCTCCATCGGCCACATAAGGAGTGAACTTCGCGAGGCTGAGGATAAGTTTCGCAAGGCCATGATCGGCAATGCCCAGCTGGACAACGAGAAAAACTGCCGCAGCCTACCAGGTCGAACTCTACAAGGACCGGCTAGAAGAGCTAGGGGAGGAATATGCCCAACTCCAGAGAGAACATAA
- Protein Sequence
- MKAESRLAAKRQARAEAREIRMREIERQQKEQDEARQTSAPIYEIDGLRGGRLNSSSGRLSASNSYHSSRRSSEDSLEETSSIGHIRSELREAEDKFRKAMIGNAQLDNEKNCRSLPGRTLQGPARRARGGICPTPERT*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -