Ecal002792.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eurytoma californica
Gene Symbol
-
Assembly
GCA_035586675.1
Location
JAXIUT010000009.1:14690902-14698019[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.18 23 6.8 3.3 1 23 434 456 434 456 0.98
2 11 6.3e-05 0.0081 17.6 0.4 2 23 492 513 491 513 0.95
3 11 0.00061 0.078 14.5 3.5 1 23 519 541 519 541 0.99
4 11 0.0006 0.077 14.5 0.1 3 23 549 570 547 570 0.93
5 11 0.0049 0.63 11.7 0.3 1 23 591 613 591 613 0.98
6 11 0.00012 0.015 16.8 2.0 1 23 619 641 619 641 0.97
7 11 0.001 0.13 13.8 0.1 1 17 646 662 646 663 0.90
8 11 0.35 45 5.8 1.4 1 20 914 933 914 936 0.89
9 11 0.00015 0.019 16.4 3.4 1 23 971 993 971 993 0.98
10 11 0.17 22 6.8 1.0 1 23 999 1021 999 1021 0.97
11 11 0.00069 0.089 14.3 0.4 2 23 1028 1049 1027 1049 0.97

Sequence Information

Coding Sequence
ATGGAGCTGAAGGAAGATGAGGGCCAGATCTGCAGGCTCTGCGGCCAGTGTGGAAGTATCTACATGGACGTCTTCGGCGAGGAGGGCACAAAACGCTACCTTAGCTTCAAAATACAATCGAAAATCAACATACAGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGCGTTCAATGTCTGGGCAAACTTGAATTTGTTTGCGACTTTCAAGAGGAGTGTCTACGCACCCAGCAACTGTTACGCGATCAGTACAATCTACCACCTTTGACAGATATTGAGGAAAATAAACCTGAAGATTCAGCACCAAGCACTTCAGCAACAAGcactgaaaataatgtaatcaacaataaagaaaatactgCTGAAAATAGTATAAACAATGTTAATGCAATTAACagtaatatcaataataacaacaacaataatagtaataaaaattataatcctCCAGAAAATGAAATGTCTAAAGATGATAGTAGAGCCGCCAGAAATACTACAAAGTTGCAAAGAAATCTAAGAAGTCaacaaaatcaattgaaacctattataaaaaaagatactcaacaatcacaaattttaaatgacaatGAAGATATATTAACTAATGTACAGCAAGCTGAAGTATCAACAACCATCACACGTAAACTTCGAAGTAGACAAAGTATTGAAGGACAAGTGCCTGGTAATGAAGTATCAGAAATAGATACTAATACTAAAGTCTTAAAAAGTGCCTCTGCAACTAAAAAAAGACTGAGAAGACATAATATTTCTGTAGATACTACAACAAATTCTAAAGTAACTCTCAATCAAAATATGGGAAAAAAGAATCAAGCAGacagcaataataaaattcaaatacctACTAATACTTTGAATAAGGTATTATCTGCTATAACAAATGCACCTGGTATAGGTGTTTCGGTAAAGGAACCTACAAGCCGCAATAGTGATGCTGAAGACATAAGTTTTACCGTTGAATTGTGTAAAAAACAAGAAACAGATTCTGTTACTGTAGTAGCAAAAGTTTTTCCAGATCAAGGTTCTTGTTTAGTTGATAAATCGATTGTTACATTCCTAGAAGAAGGAACTAATGAGGAGGTAAATAATCTTGTTAACAATATTGTTAGTCCAAATACTCCAAAAGATAATAGACGCAgcttaattgataaattacaaaattcagaAGATATTGCTAATAGTTCTAGAAATCCCGAAGAGCTTTTTAAAATGGATGGAGAGGAAATTCATGTTgatgaaaatgttgaacaGATCACTGTTAATGATAATCAAGTAAGTTATGCTTGCAAATTGTGTCGGAAAATATATGAACGCAGAGATAAATGCACAGTTCATGTAAAAACACATTTAGGAATAAAACAGTATATGTGCATTTTATGTCAAGctaaatttgtttgtaaatcTGACGTTATGAAGCACATAAGATGCTCGCACACAAATCCCAGACCTATTTCCTGTCCTAAGTGTCCAAAAAGATTCAGGTCTAAATTTGATCTGGCAGAACACAATAATGTGCACAAAGGAGTTAAACCATATCAATGCGCAGACTGCGATCAAAGTTATCATCACAAAGTATCATTACAAATGCACGTTAAATCACACATGCCGCCTCAAAATTTAGCTTGTGAATATTGTGGAAAAGTATTTCCATATCGCACGAGATTGCTCAGTCACATTGGTAGTGTGCACATGAAAGACAAACCTTCCAAGTACAAAGCTCATGTACTTCAACATAGTAATCCAAAACCCTTTGTTTgcgaaatttgtaaaaatagataTGCATCAAAAGCCTTTTTGAACGAGCATGTACTGAAGCATCAAGGAGTAAGAAAACATGTATGCCAAAAATGTGGAGCTTCTTTTGGACAAGCAAGTCACTTGGCTGCTCATCGTCATGTTCATGGAGAAAAAAGTCATGCTTGTCCTGAATGTGGAAAAATGTTCAATCGTCGTGACAATATGAAAatacaGCCTGATGATGGTCTACCTCAAGTCATATGTATGCGATGTCTGGGAACTATTGAATTCTGGTGTGATTTTCGTAATATGTGCCATACTACTAAGAATAATTGGGAATCATCTAATGAGaaaattgataatgatAAGGAAGAACCTAAAGAAAAACTGGAATGCGATGCTGAATCtgacaaagaaaatgttttaccAGTCAAAAATGGAAAGCGAAAAGGGAAGGTATTGCACTCGGAAGAAGCAAAGCTTACAAAAACTGTGCTTGATAATATTGTAATGGCAGATGGTAGTGAAATAGTTCAAGCTAATGAAATCGTTTGGATCTCAAGTAATAATCAATTACCAGAGCCTGAAAAAcctaaatcaatgaaaaaccAATCTAAGATTGCTAGTCCAGCCCCAGGAGATGAAGCTGAGACTGTAGAGAAAGATGGAACAGTATTGGTACAAACTTCAGGACATGATATAAACTCAGCAAGCTCTACAGAACAATTAATTGTTCTTGAAGTACAATTACCTGCCAAAGACAACTCTGTTActttaccaaaaaatattgcactacTTAAAAGAAATCGTTCTTTATCTCTTGCCAGTTCTCGAAGATCTAGTGAAGggaaatatgcaaaaatatcaGAATTAATGACGCaagagcaaaaaaatgaaattgagacttattataaaatagatatGGCACTTGTTGATGATGTAAAAGTTGCagagaatataattattctagATAAATCAAAATACCAATGCAAAATATGTCAAGTAACTTATCCAAGACTTGATAAATGTCAGGTGCACATCTGGCGACATTTGGATATGAAACCGTTTTTATGTAAAACTTgtgatttttcaactttaactATCAGTAATATTCGATGCCATATTAGAAAAagtcatttgaaaattaagccATTTCAATGCCATTTATGCCATAAAAGATACAATTCAGCTACATTACTTGAAGAGCATCTTAACATACACACAGGAACACGACCTTTTCAATgtgatttttgtaattttgcaaGTACAAGCAAACAAATTCTTGCACATcacattttaattcacaaaaaagtaaaaGACATCAAGTGTGATATTTGtgaaaaagcattttattCTAAAGGTAGAATGCGAGCTCATAAAATTACTCACAACAAGGACCAAGCATTCAAATtaaagtttttaaatcaagGAAAGCTTTACATAATCATGAAAGTgTTCATTCTGCTGCTAAATATGTATGCCCAGGAATTAGACAATACAAGTGCAATAACTGCAATAAATCTTTTGCTCAACAATCTCATCTATCAGCACATATGGCTGTTCATAGTAACATTACGTACAAGTGTCCTGGCTGTCAAAAAGGGTTCAACCGTCACGACAATATGA
Protein Sequence
MELKEDEGQICRLCGQCGSIYMDVFGEEGTKRYLSFKIQSKINIQIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQLLRDQYNLPPLTDIEENKPEDSAPSTSATSTENNVINNKENTAENSINNVNAINSNINNNNNNNSNKNYNPPENEMSKDDSRAARNTTKLQRNLRSQQNQLKPIIKKDTQQSQILNDNEDILTNVQQAEVSTTITRKLRSRQSIEGQVPGNEVSEIDTNTKVLKSASATKKRLRRHNISVDTTTNSKVTLNQNMGKKNQADSNNKIQIPTNTLNKVLSAITNAPGIGVSVKEPTSRNSDAEDISFTVELCKKQETDSVTVVAKVFPDQGSCLVDKSIVTFLEEGTNEEVNNLVNNIVSPNTPKDNRRSLIDKLQNSEDIANSSRNPEELFKMDGEEIHVDENVEQITVNDNQVSYACKLCRKIYERRDKCTVHVKTHLGIKQYMCILCQAKFVCKSDVMKHIRCSHTNPRPISCPKCPKRFRSKFDLAEHNNVHKGVKPYQCADCDQSYHHKVSLQMHVKSHMPPQNLACEYCGKVFPYRTRLLSHIGSVHMKDKPSKYKAHVLQHSNPKPFVCEICKNRYASKAFLNEHVLKHQGVRKHVCQKCGASFGQASHLAAHRHVHGEKSHACPECGKMFNRRDNMKIQPDDGLPQVICMRCLGTIEFWCDFRNMCHTTKNNWESSNEKIDNDKEEPKEKLECDAESDKENVLPVKNGKRKGKVLHSEEAKLTKTVLDNIVMADGSEIVQANEIVWISSNNQLPEPEKPKSMKNQSKIASPAPGDEAETVEKDGTVLVQTSGHDINSASSTEQLIVLEVQLPAKDNSVTLPKNIALLKRNRSLSLASSRRSSEGKYAKISELMTQEQKNEIETYYKIDMALVDDVKVAENIIILDKSKYQCKICQVTYPRLDKCQVHIWRHLDMKPFLCKTCDFSTLTISNIRCHIRKSHLKIKPFQCHLCHKRYNSATLLEEHLNIHTGTRPFQCDFCNFASTSKQILAHHILIHKKVKDIKCDICEKAFYSKGRMRAHKITHNKDQAFKLKFLNQGKLYIIMKVFILLLNMYAQELDNTSAITAINLLLNNLIYQHIWLFIVTLRTSVLAVKKGSTVTTI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01380804; iTF_01381548;
90% Identity
-
80% Identity
-