Basic Information

Insect: Eurytoma californica
Gene Symbol: gtf3a
Assembly: GCA_035586675.1
Location: JAXIUT010000037.1:11954458-11957962[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0027 0.34 12.5 1.5 1 23 466 488 466 488 0.97

2 16 4.2 5.4e+02 2.4 3.0 1 19 494 512 494 513 0.89

3 16 4.8 6.1e+02 2.3 1.0 3 23 522 542 521 542 0.97

4 16 0.0015 0.19 13.3 1.9 3 23 551 572 550 572 0.96

5 16 0.0039 0.5 12.0 1.4 1 23 579 602 579 602 0.96

6 16 0.00043 0.055 15.0 1.2 1 23 608 631 608 631 0.94

7 16 4.7e-07 6.1e-05 24.3 3.0 2 23 665 686 664 686 0.97

8 16 4.4e-06 0.00057 21.3 0.2 1 23 692 714 692 714 0.99

9 16 0.00097 0.12 13.9 3.1 2 23 726 748 725 748 0.95

10 16 0.0082 1.1 11.0 0.9 1 23 754 777 754 777 0.95

11 16 0.043 5.6 8.7 3.2 2 23 799 821 798 821 0.93

12 16 0.0013 0.17 13.4 0.7 2 23 828 850 827 850 0.96

13 16 5.4e-05 0.0069 17.8 1.6 2 23 858 879 857 879 0.96

14 16 0.013 1.6 10.4 2.4 1 23 885 908 885 908 0.94

15 16 1.3 1.7e+02 4.0 4.1 2 23 915 936 914 936 0.96

16 16 0.0045 0.58 11.8 2.7 1 23 942 964 942 964 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0027	0.34	12.5	1.5	1	23	466	488	466	488	0.97
2	16	4.2	5.4e+02	2.4	3.0	1	19	494	512	494	513	0.89
3	16	4.8	6.1e+02	2.3	1.0	3	23	522	542	521	542	0.97
4	16	0.0015	0.19	13.3	1.9	3	23	551	572	550	572	0.96
5	16	0.0039	0.5	12.0	1.4	1	23	579	602	579	602	0.96
6	16	0.00043	0.055	15.0	1.2	1	23	608	631	608	631	0.94
7	16	4.7e-07	6.1e-05	24.3	3.0	2	23	665	686	664	686	0.97
8	16	4.4e-06	0.00057	21.3	0.2	1	23	692	714	692	714	0.99
9	16	0.00097	0.12	13.9	3.1	2	23	726	748	725	748	0.95
10	16	0.0082	1.1	11.0	0.9	1	23	754	777	754	777	0.95
11	16	0.043	5.6	8.7	3.2	2	23	799	821	798	821	0.93
12	16	0.0013	0.17	13.4	0.7	2	23	828	850	827	850	0.96
13	16	5.4e-05	0.0069	17.8	1.6	2	23	858	879	857	879	0.96
14	16	0.013	1.6	10.4	2.4	1	23	885	908	885	908	0.94
15	16	1.3	1.7e+02	4.0	4.1	2	23	915	936	914	936	0.96
16	16	0.0045	0.58	11.8	2.7	1	23	942	964	942	964	0.98

Sequence Information

Coding Sequence: ATGTCCAAATCAGCTTTGGTGCAAAATGAATCAGTTAATGAATCAGTTTCAACACAAAATGttaatgaagataaaaatgaacatgAAGAAGAAAGAATAAGTTTATCTCCCGTTGCAGATTTAACAGCTACAAAAagcattgattttaaaatagaaaattcagATGATAACAATTCTGATGATTCTATGGATTATGACTGTGATACTGCAAATGATtcttataattatgaaaatgattcCATTGAAGAATTTGATCCTCAAGATTCGAATGAGGGAactgtaagtaaaaataaagattcagAAACATTTGACAGTGAAGAAATAGTAGAAGAGTCGAAAAATACTGCTTATAAATATGATGAATCTTTAAATGcttatataaaacttaaagTTAAAGAGGATAATCAAACTGATgctgaaagtaaaataaaaataccagAAAAAGTTAAGGAAACAGAAAGTATGACAATCAAATTAGAATCTAGTAAATCTTTGAGTCAACCAACAAAAGTacccaatattttaaaacgaaaattatcaAGTGGAAATGTAAGCGATGAAAGTAACGATAGTAGCAAAgcacaaatttcaaaattaaatattgatttaaaagatataaaaattccaaaattaaatcttCAAGATTCAACTATAAAAACAGAAGAAGATGGTGTCATGTATGTCACTGCTAAAGGATCTAAACCTAATGAAATGCttttgataaaagtaaaaaaaatggataagtCAACTGAAAAGAAAGGGGATAAAGTTGGCAAGAAAAAAGAGTCTACAGTAGTACACAGAATATTTCCAAAGTATGATGGAAGTAGCAGTAAGGGTAGCATAATCGATGAACAAATAgaagtatataaaaagaaaagagtggAAATATTAGGTGGATCAGCTATTATGTCAGAGATGGAGATGGAAGTGGAAGAGCCAGAAATTAGAACAGCAGGAGGTCTTGaagtagaaaatgaaaaagataaaaaagaacaaaaaaatgaagaacatGAATTGGAagatgataaaagaaaagtattacaTGCAGAAGGCTCATTAGATGGTAAAAAATTGTCTACTTCTGCATTAGAGCAGCCTTCAAAGATTGATAAGCTAAAGCAACGCTggaaagatattaaaaaaagacacgACACTATTACTAAAGATTTATCAGAAGATTGTTCTGCCAGATTACGAACACTTCTCAGACAAAAAGATGAATACATAGCAgagtttgttaattatttaaagcagaGAAGAATTGTAGTATCACGTCTCAAAGACGAAGATATAATTACATtgtatgaaaagaaaaataatgtaactaTAGAGAGACCTGCAACAATGAAAGAGGAGGTACAAGAAATAGACCCATTTGTATGCTTAAAAAGTTATGAGTGCGATTTCTGTTTCAAATCATTTCCGGATAGAGATGAGATGTTTGAGCACTCAAAGTACCACGATTTTAGAATAATGCACTATTGCGAAGATTGTaagcaagaattttttacccaCAAAGCCAAACGCGCTCACAATCCCGACTGTTTACAAAAACTGCTATGCAGGTACTGCGACGTGATGTTAGAATctaaaggaaagaaaagacaACACGAGCAGAAGCACTGCGACGACGAGCACGGCCAGCTGTGCGATAAGTGtggtgaaaaattcaaacatcAAGGTACCTTAGATCAACACGTGAAATTGCGACACATgcaattggaaaaaattttcaagtgtcCGCAATGTCCGAAAAGATTTGCTTTAAGAACGAAGCTGACCTTCCACCTAAAATCTGTGCACACTACCAGTAGACCGTTCCTCTGCGAAGATTGCGGATCGGACTTCAAAAACCCCGCAAGCTTAAGGCACCACAGAATACGAAAGCATCAACCGACAAACAGCAAAAAGGAATGTACAGTCTGTCACAAGATGATTCCCGTATATAGTATGTCGAAGCACATGCATACGCACAAATCGTACTCCATCAAATGTCCTCACTGCgacaaaatgttcaaaaacacCTCGACTTTGAAGCAGCACCTACGAATTCACGAGGATCAAAGGcaatacaagtgcgatatgTGTGGTGTTGGATTCAACAGGCGTGACGGTCTGAGGCTACATCTAAGGGTCCACGAGAAGTCCGACAGTCGAGGCCTAAAGGAGTGCTCTTGCCAGGTTTGCGGTGAGAAGTTCCCCAACCATTCAACCCTCGTCATCCATCGAAACCGTACACACAAGGACGGGCGCAACTACACGTGCCACATATGCAACAGATCGATGATATCGACGCGTTCGCTCGAGTGGCACTTGTCGAACATCCACAACGAGCCGCTGCCCGGCCTCGTGAAGGACGAATCGAGCATCGACGCCGAGACGAAACGCGTCTCCTGTTTCCACTGCAACAAGACCTTTAAGACCGAGATGATCCTGCGGACGCATGTAAAGAATACGCACACGCAGAAGGAGCCGGTAAAATGTCTGGACTGCGAGTTGATGTTCACGTCGGAGGTGAGACTGAAGCACCACATGATGGTGGAGCACAACCGGTTAGAGGGCACCCTCTCCTGTCCTCACTGTCCTAAACGCTTCGTCAACCAACTGAGATTAAAGACGCACATGATCTCGCACTCGGACGAGCGGCCTCACTCCTGCGACCTGTGCGGTTTCATGCTCAAGACGAAGATACAGCTGATCAAGCACAAGCAGAACAGACACAGTAACGAGAGACCGCTGCAGTGCAGGTACTGCTCCTGGCGGTGCAAACAGGTGAGCGCGCTCGTCTGTCACGAGAGAACGCACACGAACGAGCGGCCCTATAGCTGCAGCGTCTGCAAGCAAAGATTTAAGTACCTGGGTGACAAGAACAAACACGAGAGACGGCACGAAAGTCTTGGGGGTAGCGGTTTCAAGAGAATCGTCACTGGCAGAAACACAAACAAGAGTATCAAGAAAAGAGAGGAAGGCAACTCGACGGAGATGGATTCGGAAGTCGAGCGGGAAACGTACGACAACGAAGGAGAAGCTGAGGAGCAGGTCGAGCAGAACgagatcgaaatttttaacgaaacgaaaattgtgaaattcgATACTGATGAAATAGTTGCTCAAAGGTCAGAAGACTTTCAGCAGaTTTACGTGCAGGAAGTAACACAAGATATGGATACTACGACTGAAGTTGTGGTGGGAGTGGAAGAAACGGCGGTTTACACCGAAGAAGTTACCGCAGGTTACGATAAGCAGGATGTAATAGCCGGCATAATAGATGAACAAATGTTACAACCGGGTACAGTTGTGCATCTCGAACAGGAAGATGAAAACGGCAAAATTCAAGTGATACCCGTGATGCTGTCCCTGCCAGATTTAACGGATGGTACATCtgaagtaaatttaacaaCGGCATCGATAATGTATAGTACCTAG
Protein Sequence: MSKSALVQNESVNESVSTQNVNEDKNEHEEERISLSPVADLTATKSIDFKIENSDDNNSDDSMDYDCDTANDSYNYENDSIEEFDPQDSNEGTVSKNKDSETFDSEEIVEESKNTAYKYDESLNAYIKLKVKEDNQTDAESKIKIPEKVKETESMTIKLESSKSLSQPTKVPNILKRKLSSGNVSDESNDSSKAQISKLNIDLKDIKIPKLNLQDSTIKTEEDGVMYVTAKGSKPNEMLLIKVKKMDKSTEKKGDKVGKKKESTVVHRIFPKYDGSSSKGSIIDEQIEVYKKKRVEILGGSAIMSEMEMEVEEPEIRTAGGLEVENEKDKKEQKNEEHELEDDKRKVLHAEGSLDGKKLSTSALEQPSKIDKLKQRWKDIKKRHDTITKDLSEDCSARLRTLLRQKDEYIAEFVNYLKQRRIVVSRLKDEDIITLYEKKNNVTIERPATMKEEVQEIDPFVCLKSYECDFCFKSFPDRDEMFEHSKYHDFRIMHYCEDCKQEFFTHKAKRAHNPDCLQKLLCRYCDVMLESKGKKRQHEQKHCDDEHGQLCDKCGEKFKHQGTLDQHVKLRHMQLEKIFKCPQCPKRFALRTKLTFHLKSVHTTSRPFLCEDCGSDFKNPASLRHHRIRKHQPTNSKKECTVCHKMIPVYSMSKHMHTHKSYSIKCPHCDKMFKNTSTLKQHLRIHEDQRQYKCDMCGVGFNRRDGLRLHLRVHEKSDSRGLKECSCQVCGEKFPNHSTLVIHRNRTHKDGRNYTCHICNRSMISTRSLEWHLSNIHNEPLPGLVKDESSIDAETKRVSCFHCNKTFKTEMILRTHVKNTHTQKEPVKCLDCELMFTSEVRLKHHMMVEHNRLEGTLSCPHCPKRFVNQLRLKTHMISHSDERPHSCDLCGFMLKTKIQLIKHKQNRHSNERPLQCRYCSWRCKQVSALVCHERTHTNERPYSCSVCKQRFKYLGDKNKHERRHESLGGSGFKRIVTGRNTNKSIKKREEGNSTEMDSEVERETYDNEGEAEEQVEQNEIEIFNETKIVKFDTDEIVAQRSEDFQQIYVQEVTQDMDTTTEVVVGVEETAVYTEEVTAGYDKQDVIAGIIDEQMLQPGTVVHLEQEDENGKIQVIPVMLSLPDLTDGTSEVNLTTASIMYST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01381557;
90% Identity: iTF_00713160;
80% Identity: -