Basic Information

Gene Symbol
ZFX
Assembly
GCA_035586675.1
Location
JAXIUT010000021.1:10756740-10761670[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2.4 3.1e+02 3.2 0.1 3 23 27 47 26 47 0.94
2 15 4.2 5.4e+02 2.4 3.2 1 19 1031 1049 1031 1054 0.75
3 15 0.002 0.26 12.9 3.4 3 23 1141 1162 1140 1162 0.98
4 15 0.00046 0.06 14.9 0.4 2 23 1175 1196 1175 1196 0.98
5 15 2.6e-05 0.0034 18.8 2.3 2 23 1199 1220 1198 1220 0.97
6 15 0.012 1.5 10.4 0.8 1 23 1226 1248 1226 1248 0.96
7 15 3.6e-05 0.0046 18.4 4.5 2 23 1255 1276 1254 1277 0.95
8 15 0.16 21 6.9 3.7 5 23 1290 1308 1289 1308 0.97
9 15 3.2e-05 0.0042 18.5 1.5 3 23 1315 1336 1314 1336 0.97
10 15 0.015 1.9 10.2 0.3 2 23 1352 1372 1351 1372 0.97
11 15 9.8e-05 0.013 17.0 0.7 1 20 1378 1397 1378 1400 0.92
12 15 0.0029 0.38 12.4 3.7 1 23 1408 1430 1408 1430 0.99
13 15 0.0034 0.44 12.2 3.2 1 23 1436 1458 1436 1458 0.97
14 15 6.2e-06 0.0008 20.8 3.9 1 23 1464 1486 1464 1486 0.99
15 15 0.00063 0.081 14.5 7.0 1 23 1492 1514 1492 1515 0.96

Sequence Information

Coding Sequence
ATGGATCTCAGCTCAACAGTGAGTGCAATGTCAGCTGCCACAGCCAGCAGCAATAGTGGCAGTGGCGGAGCAGTGGCCTGCCCAGTCTGCACACTGTACCTGCGTGAAGGCATCAGTTTGCAGAAGCACTTGGATACGCATCCAAAGGAACAAGTAATAGAGGCGCTTATCCGAGCGAGCAGTGGTGGCGGTGCTTCGGCTTTATTTGGCCAAAGTTTTGCGCCTCAACAGCCACAGTCACAAACAACCTCGATACCAACACCAACTCCGACGCCGACACCGACACCGACCCCCACACCCGCACCCGCGCTGCCGATGCCGACGTCAAGTCCGGGTACCAGTGTACAGCCAACATCTTCGCCGAGTCCGCATGTTCCTCACGCACAGTCGCCTTATCCAATTGGCCCTATTTTCGAATGTCCGCCAATCAACGCGATGATACCTCCACCGCAGTTCACTTCTTTTAGCTACCaacaatttgttaataatggAACAATGATGATACCAGCTCAATATGCAATGGCTCAGGCTCAGCCACCCCAAACCAGTCAAATGATGCAGATGTTGTATAGTCCATATGGAATGTACCATCAACAGCAAATTCCAACAGTACAAATGATTTCGGCACCAACAATGATGCCTACGACGGCGACAACTCTACCAACGACGGTACCAGCTGTTACAGCGCGTATGAGACCAGCTACGAATACGAGCAACGTTACGCTCACAGCAGTTAAcgagacgacgacgacgacagCATCGCCTCCACGATCGTCCAGCTGTACACAATCGCAGCATCAGATGCAGGCATCGCAACAGCAGCCTCAGCAGTCACAGCAACAACAACTGGTTATTGAATCACCTAAACATCAAATAGTCCAGGAAATAATTCCTGACCGAATACTTCCCGATTTGGAGATGCCTGCAACCCCTGAACCGACACCTGCTGAGAATGAACACAACTGTACGACGATTGAACATAGAGAGCAACTAACTCAAAATAGTTGCGTTCAAGAAGAACAACGACACGTTGAACATTATCACAGGGAGGATTCGGTAACGTTAGTCAGCAATACCTGTGAAGAAAATGTTGACGACAAAATTGAGTCGATCCTACCAGATATTGAGGACAATGAAGAAATAGAATCGCTAATAGTGAGGAACACAGACAGGGTAGTTAATGACAAACATACTGAAGTGCAAGTGTTGGAGACTGATGAACATATGGAAACTTCAGATCACgaacaaattacaaataagACAGAAATGGAAAGAATTCAAAGTGATGAGACGAAAGATAGTGAGGAACACAATAAATCGTCCGATAGTGCAGAAGTCGTTATTGAAAGTGCCCAAGAACCGAATGAAGCACTAGCTAGCGAAACTACAACTtccagtaataataaaattgaaatcgaaCAATTGGGTCGACTTCTAGTAAATATGGAATCTGACTTCAGTAATCTAGACACGTCTAACAAGGTCGAAGAAGAGAAAACGGAGAAAACTCAAGAAATTATTCATGCGATCTCAATGGATGAAACTAATGAGAAACCTACCGAGGAAGACGAAAGCACAAGTGTTTCATATCATAAAGCAAGTCCGGAACCACTCGAGTGCAAAATTATTGTCGCTCACGAAGACACTGATGTGTCGTCTGTTGCATCTGAGGATTTCGTTCAATGCGACATGGGAATTCAAAAGATCGCTTCACCTCCTTATCAGTATAAGTATTCGCAATCAGCCCCTACCTCAcctgttttaaagaaaaaacattatcGCTCTCTATCTCGCGCTTCTATTCGTTCTGACTTTGACCGTTCGAACGAAAATATCCCTGCTTATCCAGTGGGATTCGAAGCCACGACATTAGTAGACTACCTCAAGGACAATTATAATGACGAAGATATGGAACTGGAGGAACCACATCACACATACTTGAAAGAAAATAGTGGTATGATTGCCGAACATACAGCAACCCATCCGTCTATGTCGACGGGTGTAAGAGGTGTTTCTATTCTAAAGGCCCGTCGAAGTAAAGTACCTAGCTCGCCAATATCCGTTCGATCTGCTTCATCTTATGGTAACATGgaagaagacgaagaagaagaagatgatgACGTTGATGAAGAAGAGGATGAAGATTCAGACGCCGACAGTTGCATCAGTTGTCACTCTAACGACAAAGAAGatgaggaggaagaggaacaAGAAGAACGCATTATGCTTACCTCTTCTGCACAGGAAATGGTTGAAGAAGATGAGCATGAAGAGAAAAAGGTGCTTTCACACGGTGAGGACTGCAAAGTCGTAGTAGCTCCGGAAATAATGCAACTGCAACATCATCAACAACAAGAACAGCCTGCTGATTTCCGATCTCAGAACTTAATGGCTGAACATTATTCGGTCGCTTCATTCCCGTTAGAACATCATCAGTCGATTATACatcagcaacaacaacaatcTGCTACAATGATCAGCCATGAAACCTATCCAATGTCCAGTAACGAAGCTTCACAGCATCTAATGAACATATCTGATTGTGTAGATCCAACGACTAGTACAGACTCTAAGAGTTACTCCAGCTCCAGCAAATCAGTAATACAAAAACCTTCGACGGAGCTGCTAAATATAAGTGAGGATGCTCATGCGGGTCCTATGAACGTTTTCGAATTTGACGGACTGCAAATACTCGTGCCAAGCACCTTTATTAGCGAATCGTCGCAAAAAGCTGTAAGTGGAACAAGTCAACAGTCAATGTCGAGTAGCGAAAATGGAGCTGGAAACGATGAGGAAGTTAAGAGCGTAAATATGAGAGCTGATGAAACTATGCCAGCCAGAGGTGAATTGTCGGAACAGGAAAGTAATGGTTGCACTGAGCAATCAGCCTGGCAGctaTATATGGGACAAGAGTCTTCGCGTATGTCTACGTCGTACGACCTAATGGCACGTGAAAGCTGGGAAGAATCGGAAGGATCAGATCATGAAGACAACAACGGCGGTCCTTTGCTTGACAGTCGCTCGCTAGCAACACATTTCACTTCTAGTTTGTTCCTTGATCGTGATCGTAAAACTCCTACTCGTCGGGTATTTAAATGCTCGCACTGCTCAGAGGTATTCGATTGTCCGAAAGAGCGACGGGTACACAGCACGATGGTTCATAAAGAGGCCGGTCCGTCAAGCTGTAGTAACGACAATATGGATCATCCCTCGGAACTAAAAGATATCAAACTACTAGAAGGTCGAGCGAACGTTTTTGAAGAGATTTTTGTCCCTGGAGGTATACATATGCAACAAACCTATCAACATCAACAACAACCTCTACTTCATCAGTTGCAACCTCCCCCTCAGCACTCGAGCACAACGAAAGCCGACGGTGATGTAAAAGTCGTTCCATTACTTCCCGTTAGTGAAGTCCTTTGTACTCTTTGCAATCAACGATTCAGCAGTGAAAAATCTTTACAGATTCACCACAGGCGCATGCATGTGGCTGAACCAACAAAACGCATTCGCGAAAATGCCAAGTGTCAGATCTGTAATGAAGAGTTCACTTCCGTAGCCAATTTTAATCTTCACCTTAAGATTCATCCTCTAGAGTGTGGTCAATGTGGTAAATACTTCTATCGTAAGCAAAATTTCAAGCTCCACATGAAGCGTCACCTGGGAATTAAGCCTTTCCGGTGTACGGTGTGCGACAAGGCCTTTCTTACAAAACAGAAGCTCGACGAACATACAAACGGCCACACGGGTAACGCCCctgtaaaatgcaatttatgcAACGAGACATTCAGACGGTATTCAAATCTCACTCAGCATAAGAATCGTCACCATCTAAACATCAAGAAGAAGCTAAAAGATTACATCTGCCATTGCGGAGAAGTATTCCATACAAAGAAGAAGCTCGCATGGCACAAAGAAACACACGACGAAAAGCCAAAAGCGTGCACCTACTGCAACGAACGCTTTATACACATGGCGAGTTTAACAAGACATATGCGAAGAGCCCACAATCGAAGATTTGTTCCAGATGCACAGAGGGAGAATGAGAACGTAGAATGTCCAATCTGCAAGTGCATTTATTTGAGGTCGTCGCTGGCAGTGCATATGCGCGTGCATAATGGCGAAAGGCCTTATGAATGTCAGGTCTGTTCCAAAGCTTTCAGTACAAAGTGGAACTTGCAGCTCCACAAATGGACCCATGCCGCCCGCAGTACGAAGCCCTTCAAGTGTAATCAGTGCAGCTCCGCATTCTACAGACACAACGATTATACAGCTCATATGAATTCTCACAGAAACGTTAGGCCGTATACATGCAACTACTGCGGAGCGCAGTTTATTAGAAAGTACAACTGCCTACGACATGTCAAGGAACAcgaggaaaataaagcatatacGTGTGACGTATGTAACAAAACCTTCCACAGGtcgtattatttaaaagagcaCTTGAGAGTGCACTCGGGTGCGAGACCTTACTCTTGTCACATTTGCGGTAAATCCAGTAGCACAAAGTCGAATCATAATAAGCACGTCAGAATTCACCATGCACGTGAACCTGTAAATACGGAAAATTAA
Protein Sequence
MDLSSTVSAMSAATASSNSGSGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSGGGASALFGQSFAPQQPQSQTTSIPTPTPTPTPTPTPTPAPALPMPTSSPGTSVQPTSSPSPHVPHAQSPYPIGPIFECPPINAMIPPPQFTSFSYQQFVNNGTMMIPAQYAMAQAQPPQTSQMMQMLYSPYGMYHQQQIPTVQMISAPTMMPTTATTLPTTVPAVTARMRPATNTSNVTLTAVNETTTTTASPPRSSSCTQSQHQMQASQQQPQQSQQQQLVIESPKHQIVQEIIPDRILPDLEMPATPEPTPAENEHNCTTIEHREQLTQNSCVQEEQRHVEHYHREDSVTLVSNTCEENVDDKIESILPDIEDNEEIESLIVRNTDRVVNDKHTEVQVLETDEHMETSDHEQITNKTEMERIQSDETKDSEEHNKSSDSAEVVIESAQEPNEALASETTTSSNNKIEIEQLGRLLVNMESDFSNLDTSNKVEEEKTEKTQEIIHAISMDETNEKPTEEDESTSVSYHKASPEPLECKIIVAHEDTDVSSVASEDFVQCDMGIQKIASPPYQYKYSQSAPTSPVLKKKHYRSLSRASIRSDFDRSNENIPAYPVGFEATTLVDYLKDNYNDEDMELEEPHHTYLKENSGMIAEHTATHPSMSTGVRGVSILKARRSKVPSSPISVRSASSYGNMEEDEEEEDDDVDEEEDEDSDADSCISCHSNDKEDEEEEEQEERIMLTSSAQEMVEEDEHEEKKVLSHGEDCKVVVAPEIMQLQHHQQQEQPADFRSQNLMAEHYSVASFPLEHHQSIIHQQQQQSATMISHETYPMSSNEASQHLMNISDCVDPTTSTDSKSYSSSSKSVIQKPSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPARGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLMARESWEESEGSDHEDNNGGPLLDSRSLATHFTSSLFLDRDRKTPTRRVFKCSHCSEVFDCPKERRVHSTMVHKEAGPSSCSNDNMDHPSELKDIKLLEGRANVFEEIFVPGGIHMQQTYQHQQQPLLHQLQPPPQHSSTTKADGDVKVVPLLPVSEVLCTLCNQRFSSEKSLQIHHRRMHVAEPTKRIRENAKCQICNEEFTSVANFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFRCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSSAFYRHNDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01381536;
90% Identity
iTF_00713127;
80% Identity
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