Basic Information

Gene Symbol
ZFX
Assembly
GCA_900480045.1
Location
UXGC01000409.1:53763-58670[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2.3 2.4e+02 3.2 0.1 3 23 27 47 26 47 0.94
2 15 4 4.2e+02 2.4 3.2 1 19 1028 1046 1028 1051 0.75
3 15 0.00058 0.062 14.5 2.2 3 23 1138 1159 1136 1159 0.96
4 15 0.00043 0.046 14.9 0.4 2 23 1172 1193 1172 1193 0.98
5 15 2.4e-05 0.0026 18.8 2.3 2 23 1196 1217 1195 1217 0.97
6 15 0.011 1.2 10.4 0.8 1 23 1223 1245 1223 1245 0.96
7 15 3.4e-05 0.0036 18.4 4.5 2 23 1252 1273 1251 1274 0.95
8 15 0.15 16 6.9 3.7 5 23 1287 1305 1286 1305 0.97
9 15 3e-05 0.0032 18.5 1.5 3 23 1312 1333 1311 1333 0.97
10 15 0.014 1.5 10.2 0.3 2 23 1349 1369 1348 1369 0.97
11 15 9.2e-05 0.0098 17.0 0.7 1 20 1375 1394 1375 1397 0.92
12 15 0.00011 0.012 16.7 2.7 1 23 1405 1427 1405 1427 0.99
13 15 0.0032 0.34 12.2 3.2 1 23 1433 1455 1433 1455 0.97
14 15 5.8e-06 0.00062 20.8 3.9 1 23 1461 1483 1461 1483 0.99
15 15 0.00059 0.063 14.5 7.0 1 23 1489 1511 1489 1512 0.96

Sequence Information

Coding Sequence
ATGGATCTCAGCTCAACAGTGAGCGCAATGTCAGCTGGCACAGCCAGCAGCAATGGTGTCAGTGGCGGAGCAGTGGCCTGCCCAGTCTGCACACTGTACCTGCGTGAAGGCATCAGTTTGCAGAAGCACTTGGATACGCATCCAAAGGAACAAGTAATCGAGGCGCTTATCCGGGCGAGCAGCGGTGGCGGCGCTTCGGCTTTATTTGGCCAAAGTTTTACGCTTCAACAGCCACAGCCACAAACAACCTCAATACCAACACCAACTCCGACGCCGACACCGACACCGACCCCCACACCCGTACCCGCGCTACCGATGCCAACGTCGAGTCCGGGTTCCAGTGTACAGTCAACGACTTCGCCGAGTCCGCATGTTCCTCACGCACAGTCGCCTTATCCAATTGGCCCTATTTTCGAATGTCCACCGATCAACGCGATGATACCTCCACCGCAGTTCACTTCTTTTAGCTACCaacaatttgttaataatgGAACAATGATGATACCAGCTCAATATGCAATGGCTCAGGCTCAGCCACCTCAAACCAGTCAAATGATGCAGATGTTGTATAGTCCATATGGAATGTACCATCAACAGCAAATTCCAACAGTACAAATGATTTCGGCACCAACAATGATGCCTACAACGGCGACAACTCTACCAACGACGGTTCCAGCTGTTACAGCGCGTATGAGACCAGCTACGAATACGAGCAATGTTACGCTCACAGCAGTTAACGAGACGAAAACGACAACATCATCGCCACCACGATCGTCCAGCTGTACACAATCGCAACATCAGTTGCAGGCATCGCAACAGCAGCCACAGCAGTCACAGCAACAACTGGTTATCGAATCACCTAAACATCAAATAGTTCAGGAAATAATTCCTGACCGCATACTTCCCGATTTGGAATTGCCTGCAACGCCTGAACCGACACCAGCTGAGAATGAACACAATTGCACGGCGATTGAACATAGAGAGCAACTAACTCAAAATAGTTGTGTTCAAGAACAACGACATGTTGAACATTATCACagGGAGGATTCGGTAACGTTAGTCAACAATACCTGTGAAGAAAATGTTGACGACAAAATCGAGTCGATCCTACCAGATATTGAAGACAATGAAGAAATCGAATCGCTAATAGTGAGGAACACAGATAGGGTAGTTAATGACAAACATACTGAAGTGCAAGTGTTGGAGACTGATGAACATATGGAAACTTCAGATCACGAACAAATTACGAATAAGACAGAAATGGAAATAATTCAATGCGACGAGGCGAAAGGTAGTGAGGAACTCAATAAATCGTCCGATAGTACAGAAGTCGTCATTGAAAGTGCCCAAGAACCGGATGAAGCACTAGTTAGCGAAGCTACAACTTccagtaataataaaattgaaatcgaaCAATTGGGTCGACTGCTGGTAAACATGGAATCTGACTTCAGTAATGTAGAAACGTCTAACAAGgtcgaagaagaaaaaacggaaaaaactCAAGAAATTATTCATGTAATCTCAATGGATGAAACTAATGAGAAATCTACAGAGGAAGATGAAAGCACAAGTGTTTCATATCGTAAAGCAAGTCCGGAACCGCTCGAGTGCAAAATTATTGTCGCTCATGAAGATACTGATGTGTCATCTGTTGCCTCGGAGGATTTCGTTCAGAGCGACATGGGGAttcaaaaaatcgtttttccTCCTTATCAGTATAAGTATTCACAATCAGCCCCTACCTCACCtgtttcaaagaaaaaacattatcGCTCTTTATCTCGCGCTTCGATTCGTTCTGATTTTGACCGTTCGAACGAAAATATTTGTGCTTATCCAGTAGGTTTCGAAGCCACGACATTAGTAGACTACCTCAAGGACAATTACAATGACGAAGACATGGAACTGGAGGAACCACATCACACATACTTGAAAGAAAATAGTGGTATGACTGCCGAAGATGCAGCAACTCATCCGTCTATTTCGACGAATACAAGAGGTGTTTCTATTCTAAAGGCTCGACGAAGTAAAGTACCTAGTTCACCAATATCCGTTCGATCTACTTCATCTTATGGTAACatggaagaagaagaagaagaagatgatgatgatgatgatgatgaagaagaagatgaagattCAGACGCTGACAGTTGTGTCAGCTGCCACTCTAATGAcaaagaagaagaggaggaagaggaacAAGAAGAGCACATTATGCTTGCCTCTTCTACACAGGAAATGGTTGAGGAAGATGAGCATGAAGAGAAAAAGGTACTTTCTAACGGCGAGGATAGCAAAGTCGTAGTAGTTCCGGAAATAATGCAACTGCAACATCAGCAGCAAGAACAGCCTGCTGATTTCCGATCTCAGAACTTAATGGCTGAACATTATTCGGTCGCTTCATTCCCATTAGAACATCATCAGTCGATTATACatcagcaacaacaacaatcTACAATGATCAGCCATGAAACTTATCCTATGTCTAGTAACGAAGCTTCACAGCATCTAATGAACATATCTGATTGCGTAGATCCAACGACTAGTACAGATTCTAAAAGTTACTCTAGCTCAAGTAAATCAGTAATTCAGAAACCCTCGACGGAGCTGTTAAATATAAGTGAGGATGCTCATGCGGGTCCTATGAACGTTTTCGAATTTGACGGATTGCAAATACTCGTGCCAAGTACCTTTATTAGCGAATCATCGCAAAAAGCTGTAAGTGGAACAAGTCAACAGTCAATGTCGAGTAGCGAAAATGGAGCTGGAAATGATGAGGAAGTTAAGAGCGTAAATATGAGAGCTGATGAAACAATGCCAGCCAGAGGTGAATTGTCGGAGCAGGAAAGTAATGGTTGCACTGAACAATCAGCCTGGCAGctaTATATGGGACAAGAGTCGTCGCGCATGTCTACGTCGTACGATCTAATGGCACGCGAAAGCTGGGAAGAATCAGAAGGATCAGATCATGAAGACAACAACGGTGGTCCTTTGCTTGACAGCCGCTCTCTAGCAACACATTTCACTTCTAGTTTGTTCCTTGATCGTGATCGTAAAACTCCTACTCGTCGTGTATTTAAATGCTCGCACTGCTCAGAAGTGTTTGATTGTCCAAAAGAGCGACGGGTACATAGCACGATGGTACATAAAGAGGCCGGTCCGTCGAGCTGTAGTAACGACAATATGGATCATCCCTCGGAACTAAAAGATATCAAACTACTGGAAGGTCGAGCGAACGTTTTTGAAGAGATTTTTGTCCCTGGAGGTATACATATGCAACAAACTTATCAACATCAACAACAACCTCTACTTCATCAGTTGCAACCTCCCCCTCAGCACTCGAGCGCAATGAAAGCCGACGGTGATGTAAAAGTAGTTCCATTACTTCCCGTTAGTGAAGTTATTTGTTCTCTTTGCAATCAACGATTCAGCAGTGAAAAATCCTTACAGATTCATCACAGGCGTATGCATGTGGCGGAACCGACAAAACGCATTCGCGAAAATGCGAAATGTCAAATCTGTAATGAAGAGTTCACTTCTGTAGCCAATTTTAATCTTCACCTTAAGATTCATCCTTTAGAGTGTGGTCAATGTGGTAAATACTTTTATCGCAAGCAAAATTTCAAGCTCCACATGAAGCGTCACCTGGGAATTAAGCCTTTCCGGTGTACGGTGTGCGATAAGGCCTTTCTTACAAAACAGAAGCTCGACGAACATACCAATGGCCATACGGGTAACGCCCCtgtaaaatgcaatttatgcAACGAGACATTCAGGCGGTATTCGAATCTCACTCAGCACAAGAATCGCCACCatctaaacataaaaaagaaactaaaagatTACATATGCCATTGCGGAGAAGTATTCCACACAAAGAAGAAACTTGCATGGCACAAAGAAACACACGATGAAAAGCCCAAAGCATGCACCTACTGCAACGAACGCTTTATACACATGGCAAGTTTAACAAGACATATGCGAAGAGCCCATAATCGAAGATTCGTTCCGGATGCACAGAGGGAGAATGAGAACGTAGAGTGTCCTATCTGCAAGTGCATTTATTTGAGATCATCGCTGGCAGTGCATATGCGCGTGCATAATGGCGAAAGACCTTATGAATGTCAGGTCTGTTCCAAAGCTTTTAGTACAAAGTGGAACTTGCAGCTCCACAAATGGACCCATGCCGCCCGCAGTACGAAGCCCTTCAAGTGTAATCAGTGCAGCGCCGCGTTCTACAGACACAGCGATTATACAGCTCATATGAATTCTCACAGAAACGTTAGGCCGTATACATGCAACTACTGCGGAGCGCAGTTTATTAGAAAGTACAACTGCCTACGACATGTCAAGGAACACGAGGAAAATAAGGCATATACATGTGACGTATGTAACAAAACCTTCCACAGAtcgtattatttaaaagaacacTTGAGAGTGCACTCGGGCGCGAGACCTTACTCTTGTCACATTTGCGGTAAATCCAGTAGCACAAAGTCGAATCATAATAAGCACGTCAGAATTCACCATGCACGTGAACCTGTAAATACGGAGAATTAA
Protein Sequence
MDLSSTVSAMSAGTASSNGVSGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSGGGASALFGQSFTLQQPQPQTTSIPTPTPTPTPTPTPTPVPALPMPTSSPGSSVQSTTSPSPHVPHAQSPYPIGPIFECPPINAMIPPPQFTSFSYQQFVNNGTMMIPAQYAMAQAQPPQTSQMMQMLYSPYGMYHQQQIPTVQMISAPTMMPTTATTLPTTVPAVTARMRPATNTSNVTLTAVNETKTTTSSPPRSSSCTQSQHQLQASQQQPQQSQQQLVIESPKHQIVQEIIPDRILPDLELPATPEPTPAENEHNCTAIEHREQLTQNSCVQEQRHVEHYHREDSVTLVNNTCEENVDDKIESILPDIEDNEEIESLIVRNTDRVVNDKHTEVQVLETDEHMETSDHEQITNKTEMEIIQCDEAKGSEELNKSSDSTEVVIESAQEPDEALVSEATTSSNNKIEIEQLGRLLVNMESDFSNVETSNKVEEEKTEKTQEIIHVISMDETNEKSTEEDESTSVSYRKASPEPLECKIIVAHEDTDVSSVASEDFVQSDMGIQKIVFPPYQYKYSQSAPTSPVSKKKHYRSLSRASIRSDFDRSNENICAYPVGFEATTLVDYLKDNYNDEDMELEEPHHTYLKENSGMTAEDAATHPSISTNTRGVSILKARRSKVPSSPISVRSTSSYGNMEEEEEEDDDDDDDEEEDEDSDADSCVSCHSNDKEEEEEEEQEEHIMLASSTQEMVEEDEHEEKKVLSNGEDSKVVVVPEIMQLQHQQQEQPADFRSQNLMAEHYSVASFPLEHHQSIIHQQQQQSTMISHETYPMSSNEASQHLMNISDCVDPTTSTDSKSYSSSSKSVIQKPSTELLNISEDAHAGPMNVFEFDGLQILVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPARGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLMARESWEESEGSDHEDNNGGPLLDSRSLATHFTSSLFLDRDRKTPTRRVFKCSHCSEVFDCPKERRVHSTMVHKEAGPSSCSNDNMDHPSELKDIKLLEGRANVFEEIFVPGGIHMQQTYQHQQQPLLHQLQPPPQHSSAMKADGDVKVVPLLPVSEVICSLCNQRFSSEKSLQIHHRRMHVAEPTKRIRENAKCQICNEEFTSVANFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFRCTVCDKAFLTKQKLDEHTNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYSCHICGKSSSTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01381536;
90% Identity
iTF_00714602; iTF_00713838;
80% Identity
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