Basic Information

Insect: Eurytoma californica
Gene Symbol: -
Assembly: GCA_035586675.1
Location: JAXIUT010000021.1:2381043-2391628[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00012 0.015 16.7 1.4 1 23 433 455 433 455 0.96

2 18 5e-06 0.00064 21.1 1.9 1 20 461 480 461 483 0.94

3 18 4e-05 0.0051 18.3 0.7 1 23 489 511 489 511 0.98

4 18 9.7e-05 0.012 17.0 4.4 1 21 517 537 517 539 0.95

5 18 3e-05 0.0039 18.6 4.6 1 23 545 567 545 567 0.99

6 18 0.00011 0.015 16.8 5.7 1 23 573 595 573 595 0.97

7 18 1.1e-05 0.0015 19.9 7.1 1 23 601 623 601 623 0.97

8 18 1.1e-07 1.4e-05 26.3 2.7 1 23 629 651 629 651 0.98

9 18 8.2e-05 0.011 17.2 6.7 1 23 657 679 657 679 0.97

10 18 2.6e-05 0.0033 18.8 5.8 1 23 685 707 685 707 0.98

11 18 6.8e-07 8.7e-05 23.8 2.9 1 23 713 735 713 735 0.98

12 18 1e-05 0.0013 20.1 7.8 1 23 741 763 741 763 0.98

13 18 3.2e-05 0.0041 18.5 9.1 1 23 769 791 769 791 0.98

14 18 4.2e-05 0.0054 18.2 7.5 1 23 797 819 797 819 0.98

15 18 0.0012 0.15 13.6 8.8 1 21 825 845 825 847 0.94

16 18 1.5e-05 0.002 19.5 0.4 1 23 853 875 853 875 0.98

17 18 0.036 4.7 8.9 4.5 1 23 885 907 885 907 0.98

18 18 5.9e-07 7.6e-05 24.0 1.3 1 23 913 935 913 935 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00012	0.015	16.7	1.4	1	23	433	455	433	455	0.96
2	18	5e-06	0.00064	21.1	1.9	1	20	461	480	461	483	0.94
3	18	4e-05	0.0051	18.3	0.7	1	23	489	511	489	511	0.98
4	18	9.7e-05	0.012	17.0	4.4	1	21	517	537	517	539	0.95
5	18	3e-05	0.0039	18.6	4.6	1	23	545	567	545	567	0.99
6	18	0.00011	0.015	16.8	5.7	1	23	573	595	573	595	0.97
7	18	1.1e-05	0.0015	19.9	7.1	1	23	601	623	601	623	0.97
8	18	1.1e-07	1.4e-05	26.3	2.7	1	23	629	651	629	651	0.98
9	18	8.2e-05	0.011	17.2	6.7	1	23	657	679	657	679	0.97
10	18	2.6e-05	0.0033	18.8	5.8	1	23	685	707	685	707	0.98
11	18	6.8e-07	8.7e-05	23.8	2.9	1	23	713	735	713	735	0.98
12	18	1e-05	0.0013	20.1	7.8	1	23	741	763	741	763	0.98
13	18	3.2e-05	0.0041	18.5	9.1	1	23	769	791	769	791	0.98
14	18	4.2e-05	0.0054	18.2	7.5	1	23	797	819	797	819	0.98
15	18	0.0012	0.15	13.6	8.8	1	21	825	845	825	847	0.94
16	18	1.5e-05	0.002	19.5	0.4	1	23	853	875	853	875	0.98
17	18	0.036	4.7	8.9	4.5	1	23	885	907	885	907	0.98
18	18	5.9e-07	7.6e-05	24.0	1.3	1	23	913	935	913	935	0.97

Sequence Information

Coding Sequence: atgaatagtgAGCAGCATGCTCTGCCAGCGACAACGCAGGCACAACAagagGAAGTAAGTGCAGGTCAGAGTGGTCGTTCCACATATTCAAGTCCTCTGGTAACTCCAACAAGTCTTGGCAATGTAGGAAATAGTCCGAATACGTCTGTGGATCTACGAGTAGGTACAGCTGTAGCTTTAGCCTCAGTAGCTAAGTCAATACTATTATATCCAATGGTCCTTACCAATTTCTTTCCTGGACCAATACCTCAGGTATCGGTTTATCACCATCCTCATCATAGGAATGGTGCAGGAAGCAGTGAAACTCAGACTACCAAAGATTCTGCAACTTTGCTGAACCAAGAAATGTCATTGACATCTGGTAATCAACACCAGTCATCAACTGCTCATCAGCCACCAGTTAGTACAGGCAGCCATCATAGTACGCTGCCATCAACTGCACAGattCCAGTTTCTCTTCCTGGACTTAGTCTTGATGGAGGCCATCTTCAGGCTAGTGTGAGTCATCTGCAAGCTGCCCATGCTCAGATGCAGCAGCAGATACAATCTCAACAACAGCAAGCACAATTGCatcagcagcaacagcaagcTCAGTCTCACCATCAAATACAACAAAATCATCAAAATGCACAAGCTGCAACTCAAGCGAGTCAAAATCAAAGTTCATCAAGAgaagacaaaaataaagaagagtCGACTGATAACCAGGTGCACTCTCATGTGCAGAGTGATCACCAACATCAGCAGACACAGGATTTACAACAAAGTTTGATGCatcaacagcaacagcaacaacaaaTTAATGTTACTATTGGAGGAGCCTCCACTGCGGATAATGCTAATCCCGGTGGAGTGGAGAAGGTAGAGAAGAAAGAGGAGATTCGCCAGTTGAATATGACACAatttcaAGTGCCAGATTTAAAGACTGGAAGTCATATGATGGATGTAAGGACTGCTGATGGAGCAATAGTTAAAATAAGTGCTGCATCTGATCAGGATCTTGCAAAAACTTTGGGTGTTGATATATCCCAGTATATTAATAAGggaACGGTAAACGTTGAAGAGTTGAACCAGATAAATCAACTGCTCGCTTATCACGAGGTTTTCGGTAAATTGCAGAGTGAAATAGCTGCGGGTACGACGCTAATTGGCAGTACAGTACCAACGCAGACGGTTACTACTATACAGAACGGTGCGCCTGTAGTGCAGCAAGTTcaacttaataaatttgacaTAAAGACAAGTGACGGCGAAGCAACGCCCGGACCTAGTGGCTCACCCGTATCGGTTGGCAGTCACGCCTGCGAAGTCTGCGGCAAAATCTTCCAATTTCGGTATCAGCTGATTGTTCATCGAAGATACCATACGGAAAGAAAACCTTTTACTTGTCAGGTGTGCGGGAAAGCATTCACTACTGCATCGGATTTAACGCGCCACGGGAAGTGCCATTTAGGCGGTTCCATGTTTACGTGTGCGGTTTGTTTTCATGTTTTCGCAAACGCACCCTCATTAGAGCGACACATGAAGCGTCACGCCACGGACAAGCCGTACAATTGTACGGTCTGTGGAAAAAGTTTTGCAAGGAAAGAACACCTCGACAACCACACCAGGTGTCACACGGGAGAAACCCCGTATAGaTGTCAGTACTGCGCGAAGACATTCACGCGGAAGGAACACATGGTGAACCATGTGAGGAAGCACACCGGTGAAACGCCTCATCGTTGCGACCTTTGCAAGAAGTCTTTTACCAGAAAGGAGCACTTCATGAACCATGTGATGTGGCATACCGGCGAGACACCCCACCACTGTCAGGTCTGCGGCAAAAAGTACACGCGCAAGGAGCATCTGGCCAATCACATGCGTTCGCACACGAACGATACGCCCTTTCGCTGTGAAATTTGCGGCAAGTCGTTCACGCGCAAAGAGCACTTCACGAATCACATAATGTGGCACACGGGCGAGACGCCGCACCGCTGCGACTTCTGCTCGAAGACGTTCACGCGCAAGGAGCACCTGCTGAACCACGTCCGACAGCACACGGGTGAGTCACCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGAGAGACGCCCTTCCGCTGCCAGTACTGTCCGAAAGCGTTTACGCGGAAGGACCACCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACGAAATCCTTCACGCGGAAGGAACATTTGACAAATCACGTGCGTCAACATACAGGCGAGTCGCCCCACCGCTGCCACTTCTGCTCCAAGTCCTTCACCCGCAAGGAGCACCTGACGAATCACGTGCGCATACACACCGGCGAGTCGCCCCATCGCTGCGAGTTCTGCCAGCGCACCTTCACGCGCAAGGAACACCTCAACAATCACCTAAGGCAGCACACAGGCGACTCGTCGCACTGCTGCAACGTATGCTCCAAGCCGTTCACGCGCAAGGAGCATCTGATAAATCACATGCGCTGTCACACCGGCGAGCGTCCATTCGTTTGTACCGAGTGCGGCAAGAGTTTCCCGCTGAAGGGCAACCTCCTCTTCCACATGCGCTCGCACAACAAGGGCAGCCAGGCGGAACGGCCGTTCCGCTGCGACCTCTGCCCCAAGGACTTCATGTGCAAGGGGCACCTTGTGTCGCACCGGCGCTCCCACTCGGACGAGCGGCCCCACAGCTGCCCGGACTGCGGCAAGACCTTCGTCGAGAAGGGTAACATGCTGCGCCACCTGCGCAAGCACGCGGCCGAGGGGCCGCCCACGCAGGTCAGCAGCGCGGCCTCGGCCCTGGTCGGCCAGcaggcggccgccgcggctgctgcggctgcGGCTGGCGCGCCCAGCCTGCCCATAcccacggcggcggcggccgcggccgcggtcCTCGTTGGCCATCCActtgcgccgccgccggccccGGCGGTCGGCCTGCCGCAGCACACCGTCGTCGTGCCCACCCCGCCCGGCGTCCTCGCCTCCTACTGA
Protein Sequence: MNSEQHALPATTQAQQEEVSAGQSGRSTYSSPLVTPTSLGNVGNSPNTSVDLRVGTAVALASVAKSILLYPMVLTNFFPGPIPQVSVYHHPHHRNGAGSSETQTTKDSATLLNQEMSLTSGNQHQSSTAHQPPVSTGSHHSTLPSTAQIPVSLPGLSLDGGHLQASVSHLQAAHAQMQQQIQSQQQQAQLHQQQQQAQSHHQIQQNHQNAQAATQASQNQSSSREDKNKEESTDNQVHSHVQSDHQHQQTQDLQQSLMHQQQQQQQINVTIGGASTADNANPGGVEKVEKKEEIRQLNMTQFQVPDLKTGSHMMDVRTADGAIVKISAASDQDLAKTLGVDISQYINKGTVNVEELNQINQLLAYHEVFGKLQSEIAAGTTLIGSTVPTQTVTTIQNGAPVVQQVQLNKFDIKTSDGEATPGPSGSPVSVGSHACEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFTTASDLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDLCKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLINHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSQAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSSAASALVGQQAAAAAAAAAAGAPSLPIPTAAAAAAAVLVGHPLAPPPAPAVGLPQHTVVVPTPPGVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00286639;
90% Identity: iTF_00969825;
80% Identity: -