Ecal036077.1
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- DMRT2
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010063746.1:96-599[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-26 8.9e-22 77.8 11.6 1 47 36 82 36 82 0.99 2 2 0.16 2.1e+03 -0.2 0.1 37 46 108 117 104 118 0.85
Sequence Information
- Coding Sequence
- atgttcataatcTCTCGGAAAATCGCAGCGGCGGACGAGCGGCTCTCAGCGTCGGGATCCAGCGAATCGGCgggcagcggcggcgcggcgacgCCCGGTCGTACGCGGAGTCCAAAGTGCGCGCGCTGCCGCAACCACGGCATCGTATCGGGGCTGAAGGGCCACAAGCGCTCCTGCGCCTGGAAGGACTGCCGGTGCTCCTGCTGCCTGCTGGTGGTGGAGCGGCAGCGGGTGATGGCGGCGCAGGTGGCGTTGCGCCGGCAGCAGCAGGCGCGCGACAACCTGAACAGCCCCGAGGTTGACTCCAGCCAACCCAGCCACCTGCAGAACCGCCAGCGAGCCATGGCCGCCTACCAGCGCAGGCTCAGGAACTTCCAGCGGCACAGGCTGCAGCTCACCCAGACCAGGATCAGCGTCACCCAGGACCTGCACATTCTCAATGCTCTGCCCCATGTTTCCGGTATGGCGAGGCTTTCTTTagttaagggactatgggacatataa
- Protein Sequence
- MFIISRKIAAADERLSASGSSESAGSGGAATPGRTRSPKCARCRNHGIVSGLKGHKRSCAWKDCRCSCCLLVVERQRVMAAQVALRRQQQARDNLNSPEVDSSQPSHLQNRQRAMAAYQRRLRNFQRHRLQLTQTRISVTQDLHILNALPHVSGMARLSLVKGLWDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -