Ecal032984.1
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- SUB1_1
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010054983.1:665-1486[+]
Transcription Factor Domain
- TF Family
- PC4
- Domain
- PC4 domain
- PFAM
- PF02229
- TF Group
- Unclassified Structure
- Description
- This domain is found at the C-terminal end of Activated RNA polymerase II transcriptional coactivator p15 from humans, YdbC from Lactococcus lactis, and other PC4 family members. p15 has a bipartite structure composed of an N-terminal regulatory domain and a carboxy-terminal cryptic DNA-binding domain [1-4]. Activity is controlled by protein kinases that target the regulatory domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.32 1.2e+04 -3.1 0.8 28 37 68 78 66 78 0.72 2 2 5.1e-24 2e-19 69.9 0.4 1 50 83 134 83 136 0.97
Sequence Information
- Coding Sequence
- ATGCCGAAATCAAAGGAAACAATTTCTGATGACAGTAGCAACAGTTCATCAGAGCAAGAAAAGGTGAAAAGCAAGCCCAAggaacaagaaaagaaaaagcctCAAAGTTCAGCAAGTGAAGCATCTGAGGATGAGTCAGAAGAAGAAACAAAATCTAAGAAGAGAGCAAAGAAAGGTAATGATGATAAGGGATCGAACAAAAAAGCTAAGAAAGAAACCAAACCTAGTAATAAAGAGGAAGAGTCATGGGATATAGGTGGTAGAAAGATGGTTACTGTACGTCCATTTAGGGGAAAATATTATGTTGACATTCGAGAGATGTACATGGACAACAACTCAGGAGAAATGAAGCCTGGAAAAAAGggtATATTTATGACCCAAGAAAATTGGAAAGCTTTAAAAGGTGTGATGGATGAAGTAGACGAGTTTTTGAAGTCCAAGTgttaa
- Protein Sequence
- MPKSKETISDDSSNSSSEQEKVKSKPKEQEKKKPQSSASEASEDESEEETKSKKRAKKGNDDKGSNKKAKKETKPSNKEEESWDIGGRKMVTVRPFRGKYYVDIREMYMDNNSGEMKPGKKGIFMTQENWKALKGVMDEVDEFLKSKC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00712868;
- 90% Identity
- -
- 80% Identity
- -