Ecal000696.1
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- -
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010000001.1:9096904-9123502[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0011 43 4.2 15.0 28 124 34 123 26 131 0.58 2 2 2.8e-09 0.00011 22.7 2.2 321 382 192 253 183 267 0.83
Sequence Information
- Coding Sequence
- ATGTCGGTCCAGGCGGAGCAGGGTGCCCGGGGTGCGCCCGACACGCGGCACGGCCACCATCACCACGGCCACCACAATCATGGCCACGTAGAGCCCGATCCTGCCACCGCTTCGCTCTTTCGTGCTCCCGTTAGGGTGAACCCAGACGCGCAAGACCGCACGACCCAGCAGATCCAGTCGAAGCTGGGCAACTACTCGCTGGTGAAGCACCTGCTGGACGAGCCGAAGCGGCTGATCGGCATCGAGGGCGTGCCGGCGAGTCCGGCCCCGGTGAGCTCGCGGCTGCCCTCCAGCCGCAGCTCGCCCTCCTCGTCGCAGGAGTTCAAGAAGCCGGGCGGCCCccgctcctcctcctcgtccgccgcctcgtcgtcgtcgtcgtcgCGGGGCGGCTTCGTCAAGCCGGCCGACGGCAAGCCGCCGtacggcggccgcggcggctaCCCGGGCCAGCCGGTCAAGCACGGCGGCAGCAGCAACGAGCACCGCAGCCACGGCCTCGTGCCCGCCAAGGGCCCGCCGCCCGGGGCCTCCGCCCTGGCCCCGCAGCCCGGACTCCCGCCCACCAGCAGGATACACAACGCCAGCGTCAGGCTGCCCAAACTTCCTATCGATGCCGCTTCGAGCTCGAAGCTCAGCGCCGACAGCACCGCCGAGCTGGAGACCATCCTGAAGGAGATGACTATGCCACCGACTCCACTGACTGCAATCGCGCAAACACCCAGAAAGGAGTTGGAGTCCAAATTCACCTTCAACCCCCATCTCGCCAAGTTGGAAGTGCCAGTCCAGGAGAGCGTGAAGCCCCGTAAGTAG
- Protein Sequence
- MSVQAEQGARGAPDTRHGHHHHGHHNHGHVEPDPATASLFRAPVRVNPDAQDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPVSSRLPSSRSSPSSSQEFKKPGGPRSSSSSAASSSSSSRGGFVKPADGKPPYGGRGGYPGQPVKHGGSSNEHRSHGLVPAKGPPPGASALAPQPGLPPTSRIHNASVRLPKLPIDAASSSKLSADSTAELETILKEMTMPPTPLTAIAQTPRKELESKFTFNPHLAKLEVPVQESVKPRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00713652;
- 90% Identity
- iTF_00713652;
- 80% Identity
- -