Ecal030422.1
Basic Information
- Insect
- Eurytoma californica
- Gene Symbol
- Su(H)
- Assembly
- GCA_035586675.1
- Location
- JAXIUT010043957.1:13-814[+]
Transcription Factor Domain
- TF Family
- CSL
- Domain
- BTD domain
- PFAM
- PF09270
- TF Group
- Beta-Scaffold Factors
- Description
- Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2 1.7e+04 -3.1 0.0 22 44 123 145 115 149 0.52 2 2 1.1e-27 8.4e-24 85.1 0.0 1 61 163 223 163 223 0.98
Sequence Information
- Coding Sequence
- ATGGTAGTTGTGATTTTCCATGCTAAAGTAGCTCAGAAATCTTATGGTACTGAAAAGAGATTCTTTTGTCCACCTCCGTGTATCTATCTTAGagGTAATGCTTGGTCGATGAGACAAGAACAGATGAGAAGAGATGGTGAGAGTGAGCAGTCCTCTCAGTTATGTGCCTTTATTGGTATAGTTGGCAATGCAGACCAGGATGTTCAACAATTGGATTTGAACAATGAGGAACAGTATTGTGCAGCAAAGACCTTGTTCATTTCAGACTCAGACAAGAGAAAACACTTTATGCTCTCTATAAAAATGTTCCATGGAAATGGCCACGATATCGGAGTCTTCCACAGTAATCGTATTAAGGTGATATCTAAACCTTCAAAGAAGAAgcaatcattaaaaaacaCTGAGCTTTGTATAGCCAGCGGCACAACTATAGCTCTGTTTAATCGATTGCGCTCACAAACAGTTAGCACACGGTACCTTCATGTGGATAATGATCACTTCCATGCAAGTTCTACCCAATGGAGCACCTTTACGATTTATTTGTTGGATGAGGAAGAGAGTGAGAATGAAGATTTTGAACCCAAGGATGGatatattcattataataatactgTGAAGCTGGTTTGTAAAGATACCGGAATGGCTTTACCCAGGCTGATTATTAgaaaa
- Protein Sequence
- MVVVIFHAKVAQKSYGTEKRFFCPPPCIYLRGNAWSMRQEQMRRDGESEQSSQLCAFIGIVGNADQDVQQLDLNNEEQYCAAKTLFISDSDKRKHFMLSIKMFHGNGHDIGVFHSNRIKVISKPSKKKQSLKNTELCIASGTTIALFNRLRSQTVSTRYLHVDNDHFHASSTQWSTFTIYLLDEEESENEDFEPKDGYIHYNNTVKLVCKDTGMALPRLIIRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00691699;
- 90% Identity
- iTF_00691699;
- 80% Identity
- -