Basic Information

Gene Symbol
stc
Assembly
GCA_900475205.1
Location
UXGB01002941.1:1654-7391[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 1 3e+04 -4.4 1.6 15 19 557 561 556 561 0.81
2 16 0.071 2.1e+03 -0.4 0.1 4 10 590 596 589 597 0.94
3 16 2.7e-06 0.081 13.7 13.5 4 18 607 621 605 622 0.94
4 16 3.1e-07 0.0091 16.7 16.4 1 19 658 676 658 676 0.98
5 16 0.054 1.6e+03 -0.1 1.4 1 10 685 694 685 694 0.85
6 16 0.43 1.3e+04 -3.0 0.8 6 10 704 708 703 708 0.89
7 16 3.9e-10 1.2e-05 26.0 16.3 1 19 714 732 714 732 0.97
8 16 1 3e+04 -6.2 4.1 5 12 761 768 761 768 0.86
9 16 1.8e-05 0.54 11.0 12.4 4 18 779 793 772 794 0.86
10 16 0.8 2.4e+04 -3.8 2.0 5 10 823 828 823 828 0.93
11 16 0.006 1.8e+02 3.0 11.1 1 11 834 844 834 856 0.88
12 16 5.8e-11 1.7e-06 28.6 13.6 1 19 861 879 861 879 0.98
13 16 0.37 1.1e+04 -2.7 0.8 6 10 908 912 907 912 0.89
14 16 0.16 4.7e+03 -1.5 5.5 10 19 926 936 924 936 0.84
15 16 2.6e-07 0.0077 16.9 13.9 1 16 972 987 972 998 0.86
16 16 1.6e-06 0.046 14.5 12.3 1 19 1004 1023 1004 1023 0.97

Sequence Information

Coding Sequence
ATGGCTACCTGGGATGGCTCCTACCCAGAGCCAGATGGATCCAATTATTACGTTAATTCGAACAGTAATCATGCAGCTGGTAACGTTACAACGTGGGACTATTACGTGCCCAATGCCAATAATGGATACACCCAGAGCGCAACAACTCCTTATGCTCTGGACACCATGGTTTTTGAGCAGAGCACACCTGCCTACTACCATCACGATGACAAAAGTGCCATTCCTCCGCTGATTCCAGGTGCAGCCAGTACCAATGAGTATGGGGACAATGCGGTGCAACCAGctaaaaacaaaacTCCAGGAACAAATAAAACACAACACAATGCTCCTCCTAACAGTCAATGTTTTTACGAAGATAACAAACAAGCTACAAACTATTATTACAACAAAAGTAACAACTATCAAAATGGTACAAAGCGCAAAGACACCAACAAGTCTCATCAAGTTTCTGATTTAGCTGAGCATTCAAATTTGCACGCCACGGCTAGTGAATTTATTCCAAACCAAAATAAACGAGATAGAACTACTTCTTCAAATATAAACAAAGGTAACAGAAGCCGAACAAATTTAGATTATCAAAATCAAGATACCAATCAAGCCACAAGCAATGTGTTCTTTGAAGATAATAAAGTAAGATACAATGAtaggaaatttgaaaataaaagagatgCTGGCAGAAGGTGGAAAGATACACAGAATAGTCAACATCAGAATTTTAAAGATGATAAGAAAGATTATAGCAGAAATCAAAATTCTCGAAGATATCAAAATGATCGATTCAATCAGAACAAAAACTTTTCTGATAAGCCAAGGAATAATCGGTCTGCTAAAGACAATGTAGAAAATACTGCTtctgaaagtaataatataaatccTGAAGCAGATAAAATTACTGAAACTCAAGATAATCCCAGTAACAGTAATACCGCTATTGCCACTAATGCAAATAACTCGCCACCTGAAACAGACAATGTGcaatctacaaaaaattctaaatcatttttaaattatagtcgTGGAGACAgatattatgataaaaaagagcGATATAATCCTAAAGATCCTAGAGATAGGAAAAGTAATTATCCTGAATATAGTAATAGTTACAATAGAAACAATTATAacagagaaaataattacaacagagaaaataattacaatagagaaaataattacaacagggaaaataattacaacagggaaaataattacaacagggaaaataattataacagagaaaacaattatagcagagaaaataattataacagagaaaacaattataatagaGAAAACAATTACAATAGAGAGAGCAATTAtaatagagaaaataaatatgaacgAAGAGAAAACAGGAATTCAACTACAGAAAATCGAGATAAGTCAGATAAGTCAACTGATTGGAggcaaaaaagtaataatgatACAGGAAATAAAAGTGCATTGCTCAAACGtccttattataaaaaatacgaacCAGATGATGATGCAAGTCAAAGGGAAAGATTAACAGAGCAGTTGAACCGTGGCCAATTAGAGTGTCTAGTTTGCTGTGAATCTATAAGGCAAGCTGACTATGTTTGGTCTTGCAAAAATTGCTATCACGTCTTGCATTTGAAGTGTACTCAGAAATGGGCTTTATCTTCACAAGGGGACAGTGGTTGGCGTTGTCCAGCTTGTCAGAATGTGACCTCAGAAGTGCCCTCGGACTACGAGTGCTTCTGCGGCAAGACGAAGGCGCCGGAGTGGAACCGTCGCGACATCGCACACTCCTGCGGCGAAATCTGCGGTCGATCGCGCTCGGACACTGGCTGCGTGCATAAGTGCACGCTGCGCTGCCATCCGGGCTCCTGCCCGCCCTGCGTGGCTATGGTCACCAAATCGTGCGGCTGCGGCCGCATGTCCCGCACTCAGAAGTGCAGCTCGGGGCCGCTACTCCAGTGCGACGAAATTTGCGATCGCGTGCTCAACTGCGGCGTGCACAAGTGCGAGGCCCAGTGCCATCACGGCAGCTGCGAGCCCTGCAGTAAGATTGTCAAGCAagAATGCTACTGCGGAAAGCACACCCGAGATGAAACTTGTGTCTTAGATCTGCCACCTATGTACTCTTGTGAGAATGTGTGTGATAAAGTGTTAGATTGTGGCAATCATAAGTGCAAGGAAATTTGCCATCCCGGCGAGTGTGGACCTTGTACTTTAAAACCTGAAACTGTTACCCACTGCTGCTGTGGACAAACTCTTTTAACTGTTAAGAGGGAGAGCTGCTTAGACCCAATCCCTACTTGTGATAAACAGTGCTGCAAGCGACTAAAATGCGGTCAACCAAGTAATCCTCATATCTGCCAAGCGAACTGCCATGAAGGTGACTGCCCAGAGTGTGAACTGATAACTAAAGTAAAGTGCCGCTGTGGCCACATGGATAAAGAAATTCCCTGTAGAGAATTGACAACTAAGGCTGATGACGCTCGTTGTGAAAAGAAATGTACAAAGAAACGTTCTTGTGGCAAGCACAAGTGCAATCAAATGTGTTGCATTGACATTGAACACATTTGTCCTCTTCCGTgctcaaaaaatttaagctgTGGTAGACACAAGTGTGAACAAACTTGTCACAGAGGTAGATGCCAGCCTTGCTGGCGCAGCAGCTTCGACGAGCTGTACTGCGAGTGCGGCGCGGCGGTGATCTACCCGCCGGTGGCCTGCGGCACCCGCCGACCCGCCTGCGAGCGTCCCTGCAGCCGCGCGCACCCCTGCGACCACGAGGTGCTGCACAACTGCCACAGCGACGCGAACTGCCCGCCCTGCACCGTGCTGACGCAGAAGTGGTGCTACGGGGAGCACGAGCTGCGCAAGGCCGTGCCCTGCTACGTGAACGAGGTCTCGTGCGGACTGGCGTGCAACAAGCCGATCTCTTGCGGCCGCCATCGCTGCATCCAGATCTGCCATCCCGGGGCCTGCGAGAAACCCGGCCAGGTGTGCGTGCAGCCCTGCACCGTACCACGGGAATTGTGCGGTCACATCTGCGCCGCGCCCTGCCACGAGGGCAAGTGCCCCGATATTCCTTGCAAAGAGACGGTCAAGGTGACGTGTCAATGTGGACATCGCACGATGTCGCGGGTGTGCGCGGAAAATTCACGCGACTACCAGAGGATAGCCAGCGGAATTTTGGCCAGCAAAATGGCAGACATGCAGCTGGGGTACACGGTTGACCTCGAGGAGGTGTTCGGTCAAGGGCCCAAGAAGCAAAACCAGCTGAAAACGTTGGAGTGCAATGATGAGTGCAAAATAGTCGAGAGAAATCGCCGAATGACCCTTGGCTTGCAGATCGTCAATCCAGATTTGAGCGGAAAACTGCTGCCTAGGTACAGCGAGCACATGAAGCAGTGGGGCAAGAAAGATCCAGCCTTTTGCCAAATGGTTCACGACAGACTCACGGAATTGGTGCAGCTGGCCAAGACGTCGAAGCAAAAGTCGCGCAGCTTCTCGTTCGAAAGCATGAACAGAGACAAGAGGCAGTTTGTGCACGAGACGTGCGAGCACTTCGGATGCGAGAGCCAAGCCTACGATCAAGAACCCAAACGCAATGTTGTGGCGACGGCAGTTAAAGATAAATGCTGGTTACCAAGTTACAGTTTATTAGAATTGTTGCAAAGAGAAAATGGTCAACGAAAAGTACCGGGGCCAATGTTGAACAAGTCAAAACTGAACAGCACTGACAGGACTGTGGATGTTTTACAGCTAAATACAAAAAGGAGTCTGAAACCTCTGCCTACAACTTCGGCTTCGCCGTCGAAGTCACCTGAACCTGAAAtagattatttcaattataaggGTTGA
Protein Sequence
MATWDGSYPEPDGSNYYVNSNSNHAAGNVTTWDYYVPNANNGYTQSATTPYALDTMVFEQSTPAYYHHDDKSAIPPLIPGAASTNEYGDNAVQPAKNKTPGTNKTQHNAPPNSQCFYEDNKQATNYYYNKSNNYQNGTKRKDTNKSHQVSDLAEHSNLHATASEFIPNQNKRDRTTSSNINKGNRSRTNLDYQNQDTNQATSNVFFEDNKVRYNDRKFENKRDAGRRWKDTQNSQHQNFKDDKKDYSRNQNSRRYQNDRFNQNKNFSDKPRNNRSAKDNVENTASESNNINPEADKITETQDNPSNSNTAIATNANNSPPETDNVQSTKNSKSFLNYSRGDRYYDKKERYNPKDPRDRKSNYPEYSNSYNRNNYNRENNYNRENNYNRENNYNRENNYNRENNYNRENNYNRENNYSRENNYNRENNYNRENNYNRESNYNRENKYERRENRNSTTENRDKSDKSTDWRQKSNNDTGNKSALLKRPYYKKYEPDDDASQRERLTEQLNRGQLECLVCCESIRQADYVWSCKNCYHVLHLKCTQKWALSSQGDSGWRCPACQNVTSEVPSDYECFCGKTKAPEWNRRDIAHSCGEICGRSRSDTGCVHKCTLRCHPGSCPPCVAMVTKSCGCGRMSRTQKCSSGPLLQCDEICDRVLNCGVHKCEAQCHHGSCEPCSKIVKQECYCGKHTRDETCVLDLPPMYSCENVCDKVLDCGNHKCKEICHPGECGPCTLKPETVTHCCCGQTLLTVKRESCLDPIPTCDKQCCKRLKCGQPSNPHICQANCHEGDCPECELITKVKCRCGHMDKEIPCRELTTKADDARCEKKCTKKRSCGKHKCNQMCCIDIEHICPLPCSKNLSCGRHKCEQTCHRGRCQPCWRSSFDELYCECGAAVIYPPVACGTRRPACERPCSRAHPCDHEVLHNCHSDANCPPCTVLTQKWCYGEHELRKAVPCYVNEVSCGLACNKPISCGRHRCIQICHPGACEKPGQVCVQPCTVPRELCGHICAAPCHEGKCPDIPCKETVKVTCQCGHRTMSRVCAENSRDYQRIASGILASKMADMQLGYTVDLEEVFGQGPKKQNQLKTLECNDECKIVERNRRMTLGLQIVNPDLSGKLLPRYSEHMKQWGKKDPAFCQMVHDRLTELVQLAKTSKQKSRSFSFESMNRDKRQFVHETCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLELLQRENGQRKVPGPMLNKSKLNSTDRTVDVLQLNTKRSLKPLPTTSASPSKSPEPEIDYFNYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00713386;
90% Identity
iTF_00713386;
80% Identity
-