Ebru022526.1
Basic Information
- Insect
- Eurytoma brunniventris
- Gene Symbol
- -
- Assembly
- GCA_900475205.1
- Location
- UXGB01004202.1:3127-9907[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.9e-13 1.9e-09 37.8 0.0 1 39 324 363 324 367 0.90 2 4 5.6e-12 1.5e-08 34.9 0.0 2 39 379 416 378 419 0.94 3 4 7.7e-19 2.1e-15 56.8 0.0 2 45 434 478 433 478 0.97 4 4 8.9e-19 2.4e-15 56.7 0.1 1 42 485 527 485 528 0.97
Sequence Information
- Coding Sequence
- CAGTCGCTCCTGAAGACGGCCGACCAGCTAAAGATCAAGGGCCTGTGCGAGGTGCCGGAGAGCAGGGAGGGCCCCTCGGTGAGCTGCCTGAGCTCGCCGCCACGCGACCCCACGACCATCAGCGCGCCCCGACTCAACTTCACCAAGCTCAAGAGGCACCTCTCGCGCTACAAGAGGCCGCGCACCTCCTGCGAGCGTAACGCCGCTACCCCCGGCGCCAcgaacaacaacaacaacaacaatcACCATCACCACCGCCACCACCATCACGCCGACCCGAGCAAGTACAAGGAGGAGGACTTCGTCGAGAGCTACGTGCGCAATTGCAATAAGGAGAACCGCCGAGACTGCTGGACGACTGAAGATGACGAGTGTATGGAGACGACAGGCGGGACGACGACAGTAGTCCTGGACTCCTGCCAGCGTAGCAgcagcgtcggcggcggcggtggaggcggaggcggcggAGGCGGAGGCGGACCCGACAACAACAACAGCGGCGCCAGCAACAACGCCGCCGGTGCAACAGCGACGACGACCAACAACAACGGCGACATGTTCTGTCACACAGGTCTGGGCCACTACGGCCATCACCCGGACCCGGCCGAGGTGGACCTACCCCCGGAGACGCAGCCGACCCCGCCCAGTGCCACCCTCGTCGGCACCACCATCACCCACCTCAGGGACCCGGACCACCACACGACAGATATTCAGAATTGCGACAGCGTGAAGATAAAGTTCGAGACGCTGCACACGATGGACTCGTCGGACACGATCGACATCGACAGTCACATGTCCGACAGAGCGAGCGTCAGCTCGAAGAACGCCGACGACAATATGATGATGATCACGCCGGAGCTACTGGGCCTGATGCCCTCTGGCAGCTCGGTGCACTCCGATTCCGGCGAGAACAATTCGCGCAGCCACTCGGGTCAGTCGGGCTCGCATCATCACGGCTCCAAGTCCTGGACGCAGGAGGATATGGACGCGGCTCTCGAAGCCCTTAGGAATCACGATATGAGCCTTACCAAAGCCTCTGCGACATTTGGCATCCCGTCGACGACTCTGTGGCAGCGCGCGCACCGACTCGGCATCGACACACCGAAGAAGGACGGCCCGACGAAGTCGTGGAGCGACGAGAGCCTGAACAACGCCTTGGACGCGCTGCGCACCGGCACCATATCGGCGAACAAGGCCTCGAAGGCCTTCGGCATACCCTCGAGCACCCTGTACAAGATCGCGAGGCGGGAGGGCATTCGGTTGGCGGCCCCCTTCAACGCCAGCCCGACCACCTGGTCGCCGGCGGATCTCGATCGCGCGCTCGAGGCCATCAGATCCGGCCAGACGTCGGTTCAGCGCGCCTCCACGGAATTCGGCATACCCACCGGCACCCTGTACGGGCGCTGCAAGCGCGAGGGCATCGAACTCAGCAGGAGCAATCCCACACCCTGGAGCGAGGACGCTATGACCGAAGCCCTCGAAGCTGTCAGgCTAGGACATATGAGCATAAACCAGGCAGCGATCCACTACAATCTTCCCTACTCGTCGTTGTACGGGCGCTTCAAGCGCGGCAAGTACGAGGAGCCGGTGGTGAACGAGATGTCGCAGGACGGCTCGTCGCAGCACTTCCATCAGAGTCCGAGCCAAAATCACTCGTCCTCCCTGCCCGATCAAATGCCGTACCAGGGCAGCTGA
- Protein Sequence
- QSLLKTADQLKIKGLCEVPESREGPSVSCLSSPPRDPTTISAPRLNFTKLKRHLSRYKRPRTSCERNAATPGATNNNNNNNHHHHRHHHHADPSKYKEEDFVESYVRNCNKENRRDCWTTEDDECMETTGGTTTVVLDSCQRSSSVGGGGGGGGGGGGGGPDNNNSGASNNAAGATATTTNNNGDMFCHTGLGHYGHHPDPAEVDLPPETQPTPPSATLVGTTITHLRDPDHHTTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFHQSPSQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_00714286;
- 80% Identity
- -