Basic Information

Gene Symbol
Arid4b
Assembly
GCA_900475205.1
Location
UXGB01000036.1:1-10042[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-28 5.6e-25 88.3 0.2 1 89 307 394 307 394 0.95

Sequence Information

Coding Sequence
ATGTTGGGGGACGATCCGCCTTACCTGTCGGTGGGCACTGAGGTCAGTGCCAAGTATAAAGGAGCCTTCTGCGAGGCCAAGATCAGAAAGGTTGTGCGCAGCGTCAAGTGTAGAGTGACTTACAAGCAGGGCTTGGGGACAGCTACTGTCACTGATGATCAGATCAAAGGAACTCTTAGAGTCGGTGCCTCTGTCGAGGCTAGGcataacgataaaaaagacTTTGTTGAAGCTACCATCACTAAAATACAAGACTGCAGTCAGTATactgtagtgttcgatgacgGTGATATTACAACGCTTAGAAGAACTGCTCTATGTCTAAAAAGTGGGAGACATTTTGCTGAAAGTGAAACTTTAGATCAGTTGCCTCTGACTCATCCGGAGCACTTTGGGAATCCTGTGATTGGTGGGAGGCGTGGTAGGAGATCTAGGCAAACACAggATGATAGTAGTGATGAAGAAGATGATGGTGCCAGAGGTAGCAACGATTCTGGATCTGGTTCTGGTAGCAAAGAAGGACCAGAAACAGAACCAGAAATTGGTAGAGTTGTTTGTGTGGAGTTGGGtgacaagaagaaaaaagataattggTTTCCTGGTTTAGTTGTGGCTCCAACTGCTCAGGATACTGTAAGAATCCGAGTTCGTGATGATTACCTTGTGCGATCATTTAAAGATGCTAGATAttACACTGTGCCGAAAAAAGAAGCTACTGAATTTACCAAGGATttggtcaataaagtggaaaACAGTGCTTTAAAAGTAGCTGTGGAAaaagctttattatttttagagaagAATGAACTACCCCCTCATTGGGATCGCGATTCTCTATTTGGAAATTCAGTTTCAACTGATAATAGTGATTCAGATGGAGAACTCGAGTCAGATAGTTCGGATGACGAACCGCGAGAAGAAAAGGATCATTTCGTTGCACAATTGTACAAATTCATGGATGATCGGGGCACGCCCATAAACAATTGCCCGATGATTGGCAACGAAGATATCGATCTTTACAGATTATTCCGTGCAGTTTACAAACTTGGGGGCTACAATAGGGTGACAAATCAAAATCAATGGAAATTAATAACCCGGCGACTCAATTTTTCTATGCAAAACAACTCGTCGACGCACAATTTAGTGAAGCAAGCATACAAGAAATTCTTGCACTCGTTTGAAGacttttatagaaaattaggATGCACCATGGTGAATCATCCAAGAGGCAGTACAAGAAAACAGCGTCCTGGTCGCAGCTTGATTCGAGATAAGGATAGAAATACCCCTGTTCCAACTCAAGATAAATCAgtgaagaatgaaaaagaagacgaagaaaaagagaaaaaagctaGCACTAGCACTGCAGTAGATGAAGaagttaaaaaggaaaaacggGAAGTCAAGAAAGAGCCAGCAGTAAAGGAAGAAGAGTCACTGGTGAAGGTGAAACGGAAAGAAGAACCTGCAGAAGAAAGTGCAAGTGGCCAGGACAGTGACGTAAATGTTGAGGGTGAGGAGGAGTCTTCCAGCAGTGAAAAATCGCAGAAAAGTACATCAAGACTAACTCCATCAAATGTTGGTGCCAAATCCAAAGCAACAGCCGCTTTAACCGCCAAACCTAAAGAAGAACCGGCAAGGAAAAAGCCACCACAAGAGAAAAAGCGCCCCGAAGTAAAGaaacaagaaaagaaagatGAGAAATCTAAGGAGGACGATAGCACAAAAACCAGATCTAAGTCCAAAGAGGATGTAATGAAGGCTAATAAGCCAAACTCTGATGCGAGAGAGACAAGAGCACCTTCAAGGGAATCTGACAAGAAGGTCTTTGCCAAACAGAGAAGAATGACTGAAGAAGAATTAAAGAAAcgaggaagaaagaaaaaagagactGAAGGTGAAAAAGGTCGAGCTCCCGAGGATCGGTCAGTTGAATATGCACCGAGTTATAAGGGACCTGTCGAGATTGGTGAtagattaaaagtttattacggACCAACGCATGAATCTAAAGTTACGTACGAAGCTAAAGTTATTGATATGGAAAAAGATGGAACTGAGGCCGTTTATTTAGTTCACTACACAGGATGGAACAcaagataCGACGAATGGATTAAGACTTCGAGAATCGCTCAAAACTTTACTCAAGCTCAAGGTCGCGTAAAGCGTACAAAGGCAACTCCTCGGCCGCAAACTCCGGGTGCGAGTTCCTCTTCATCGAAATCGAAATCAGCAACTGCTCCAAATGCAGGAACTGGAGCCTCATCTACAGCATCCGGTGCTCAGAGTCGCCGTCGTGCGCAGAGCGTAGCACCCACGAGCGGCGCCTCCAACAATAAAGATGCACGAAAAGAAGATCGTGAGGGTACTCCAGCGACTCGCTCGACGACACCGTCTCCTTTAACTTCATGCATTTCACGAACGAAAAGCCCTGCGACAACAGCAAACAGCAGACCTACCCGTACGACAAGGAATGCAGATTCAGCACTGGCGAATGACATGAGTAGGCGGACGAGGAGAACATCGGGTCACACTGATACCATGGCTGCTGAGGAGTCCGAAAGCGAGGATACAGATTCGATGGATTCGGATGCAAGTGCTGAACCCGAAACAACGCAAATTCAATCAAGGTCGAGAAGAGGCGGTGGTGCTCAGGATAGAAATCGCCGGGAGGCAAGGCGGAGGGCCGAGAGTCGCATGAAGATGGAGGAAACGAGCGATGGAGAAATGGAGAAGGAGGTGGAAGAACCGCGAAGGGGCAGACGGCTCAGAAAGATGATAGGCAAACTGCACGAAGTGAAGTCCGAACCAGAAAGTGACGAGGAGCAACCAAAAGGAAGAGATTTTGACTTAAATCAAATCAGATCTGAACTTAAGGGATTTGATAAGGCGGTAAAATTGGAAATTGCTTGTGTTGAGCCGGACccggaggaagaggaggaagagCGCCCTCCTGCTCCAATTAAACTAGAGAAAGTTGAGTCCGACAATCTTCCAGAGAAAaagcaGGCAATTCCAGATCCCGAGAAGAAACGAGAGCCACCAAAAGTCGAGCCGCAAACAGCAACACCTATTAAACGAGAGCCTATTAAGGTAGAAGCTAACTCTGAAAGTACAGAGGATATTTATGAATTCAAGGAACCCGAACCGTTTGAGTTCGAGGTACGCAATAAGAGAGATTCAGGTGGCAGTACCGGCAGTAATACTGacaaagaaaaggaaaaggaaaaggacAAGGAAAAGACAAAGAAACGTGTCTTCGAGGAGGACCTCAAGAGTCCGAAAAAGCGGCAGAAAACGTTTAATGCTGCAAACGTACCAGCAAAGGCAGAGCCAAAAACTGAAGGCAGTCCTAATGAAAACGCGGACAGCAAAAAGAAACCCCGGAAGATGTTTAAGAAGAGCGACGATATTACAGAAGAAGCTGACAATGAAGGCGAGGATATCGCTAGTACTTCGAGAGATCTTTCCAAATTTTATTCCGCTAATTACAGTGGAATGGCATTTAAACGCAGAGGAGCTTTTGGTGCTTCCAATCGAGGTATGGACGAAAATTTTACCGATGACACTAACGAGATCGCTACCGAGGACAAAgataaatcaaagaaaactGTATCAGAAGAAGATAAAAGTCCCAAGAAACGACAGACAAAGGCATTCACAGGTTCAACGACACCCAAACCCAGTGAAACAAAAGTGGAAACTTCTGTCCTAGAAAGTGTCgataacaagaaaaaagttcgCAAGATGTTCTGGAAAGGGTCAAATGACGACAATGACGAACCTGACGAGACTAGTAAagattcagtaaaattttattcaaattacagTGGACCCAAAGCTTTGTCCGGTAAACAAATGGAAACCGATGAAGTAGTCGACAATTCTGTAAGTGAAAGCAAAGAAAAGCCAAAGAAAACTGGCGAAGAAGACACGGTGAAAAACTCCAAAAAGAGACAAAAGACTTTAGCATCCGCGACTCCAAAGACGGAAGCAAATACCAATGAAAACCCTgatgtgaaaaagaaaataacgcgGAGACCAGCAGCTAAAAAAGCTGAAGAAATTAACGATGACGAAAGCGGAAGCGATGGGGCAGATGAAACAATAACCACAAGGGACCACGTTAAGTATTACTCTCATTACTCCGGACCGAAAGCAAAGGCAGCCGCAATCGCAAATGATGAGAACGCATCGGATCGCCTTGCAGCGAAGTTAGATGCTCAAGTAAGTGAAACCGCGAAAGTACTTCAACATTCGGCGAACATTCCTCAAACACCAAACAAGGAAGACAATAAGCCAAAGAGTGGAGAACCAACTGCATCCACGTCCTCGCTTACCGACACGAAACAAGGTATTTCAGCAGCTGATAAAAAGCGCATTTCTGAAGTAGTGTCTTCAAATAAAACCGAGACGAAGCCTGAGATGAAACCACTCGACTTTACACCCATCGTTCCACACTCTTTACCGGTTCCAGCGCCGATCAGCGCTCGACTACCAGCGACAGCGAGcatcgaagaaaaattatcggCGGCTGCAGTATTTCGCAGTAAGCTAAAGGACACGAAGAAAGACGACGATTCGGATTCAATGACGAGAAAGATTCTCATTAAAGAAActatgaaaaaatctgaagcAGCTATAGCGAAAAAAGTCAGGGAGAAGGATGAGAGCAAGATAAAGCACGAGCCTGAAAAGAAGAAACCGCAACCAATGGAACCTGTCATCGTGAAGAAAGATCCTTTACAGGAAATAGAGCTGCGTAAAGACCCGTTGCTGGAGgtgataaaaaagaaggaagaggAGATGGCgaaagcgaaaaaagaagcTGATATGAAACCTAACATTGTTGTTGCAACAACACCTGTAACCAAGACTTACGGTAACCAGAAGAAAGAACAAGTTACCAAGATAGAGGAGACCTGGAAGAAAGCTGCCGTGGCTACAGCGATGGCTGCTTCAAGGAACGAAGAAGTTACGGTTGCAGTATCAGGCGGTGATGCAGATAAGGACTATATGAACGTTCGCAAAGAAACGATCGTTAGCAAAATAAAGTCGAGCATAGACCGAGATTCAGTTGACTCCACAGACAGTAGCGACTCCGAGAGGAGGCTCACCATCATCGACAGCGAGGACTTCCCCGATGATAAGTGTAATGAGTCCGgctctgaaaataaaaccaaGACGTCCTTACCGTCGACCTCCTCTGGAGGGCCATACAATAACATAACGCAGCCAGAACATGCTACAGTTTTGACTATTCATGGTGAAGTTAGTCAACAGATCGGTGTTCCCAGCGTGATCAGCACAATTATACAAGCAAAAAGCTCAAAGATGGAGGAGGATGGTGAAAATCTAAATTCGCTACTTTGTGAAGAGGAAATTCCAGGGTCACCAACCCCAGGTTCGGAAACGTTGGATCAAGAACATAGGACAACTAGTTCACAAAATCTTCTTAAGTCTGATCTCGGAAGCAAAATGGCTGTCGCATTTGTAGCTGCTCAATTACCACTGAGTACTGTAGGAAGTTCTGCCCAGTTGACAAATTGCGCTATGGTTACGACGATGAGCAGTAGTTTAACAGTAACTCAAAGTACCAACAGTATAGTCGCCGTCTCAATGGTGCCGCATTCGAGCATGCAATCAATACAGCGACCTCAGTCTCAGTCTCAGCCTCAACCACAATCCCAGccgcaacagcagcaacaactACAACCACAACCACAACAACTGCAGCAGCCACcacaccagcagcagcagcatcaaCTGCATCAGCAACCTAAGCCTCAGCTGCAACCACAACCAAAACTGCAACCGCAACCGCAACTGCAACTGCAGTCGCAGTTACAGCCGCAACCACAACCTTCGGTGCAAATCCAACACCAACACCAGCATCAACAACAACAACCTctacagcagcagcagcaaccacaacagcagcagcagcaacagcaacaacaacaactccagcagcaacagcagcagcaacaacatcAACAACAACAACGTCACCATCACGAGCATGCAGTGCCAATACCTGTTCCAACGCATCGGAGAGAAAGTAATGAAGCGGATCCAGTTATGGACAACACTCCACCAACGACGCCTGACTCAATCATCTCCAATATTTCTGGTTCACCACGTGATGAGAGAATAGGTGGTTCAACACCTTCTTCATCTGAGGACAATTCTAAGCTCAATCGAGATAGCTCTGAAGCTGAGAACGACAGTGGGGGCAAGGGTAGTGCACCGGGATACAGCGAAGACGATGGTTCTCTCATCAATTCAGAACATGGGGGTAACGGTGGAGCTACGTCTTCCTCTTCCGATAGGATACCTAAACCACCAGCAAAGAGATCGCTTGCTGACGCTGACGGTGTCACGCcaaaaaagcgcaaaaaacgaaaagatcAGGATACGTCGTCTACCAATCAGAGCATTGCTTCGGGGAAGAAGTCACCACGGCAGAGTACGCGGAATACTCGTCATGGTACCGGAAGCGATAGTGATACCAGCGAAGGATCCAATCAATGCATAAATAACTCATCCCAGCAGGTCGGTAATGGAACACCAATGGTTTCCTCGACATCAGGCTCTTCCACTAATAATATGCCTGTACCGGGAATGACCAATACCAACGGAGATATTGGAAACTATTCCAATAGGTCGCCGCGGCCTACCAAGTACAACTTTTTCATAGATATGGATCCCGATTTAGATGGTAGCCAAAGGATATCAGTCCTTCAGCAAAGGTTGAGTGAACTTCGAAAAACTTACAATTCCGTAAAAGTGGAACTGGCTGGTATCGAAAGACGGAGgaagaaattaaaacgaaGAGAACGCGAAGCACAAAAAGCAGCAAAGGCTGAAATGCAACAGGCATGCTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEARHNDKKDFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDEEDDGARGSNDSGSGSGSKEGPETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKDLVNKVENSALKVAVEKALLFLEKNELPPHWDRDSLFGNSVSTDNSDSDGELESDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLNFSMQNNSSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDKDRNTPVPTQDKSVKNEKEDEEKEKKASTSTAVDEEVKKEKREVKKEPAVKEEESLVKVKRKEEPAEESASGQDSDVNVEGEEESSSSEKSQKSTSRLTPSNVGAKSKATAALTAKPKEEPARKKPPQEKKRPEVKKQEKKDEKSKEDDSTKTRSKSKEDVMKANKPNSDARETRAPSRESDKKVFAKQRRMTEEELKKRGRKKKETEGEKGRAPEDRSVEYAPSYKGPVEIGDRLKVYYGPTHESKVTYEAKVIDMEKDGTEAVYLVHYTGWNTRYDEWIKTSRIAQNFTQAQGRVKRTKATPRPQTPGASSSSSKSKSATAPNAGTGASSTASGAQSRRRAQSVAPTSGASNNKDARKEDREGTPATRSTTPSPLTSCISRTKSPATTANSRPTRTTRNADSALANDMSRRTRRTSGHTDTMAAEESESEDTDSMDSDASAEPETTQIQSRSRRGGGAQDRNRREARRRAESRMKMEETSDGEMEKEVEEPRRGRRLRKMIGKLHEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKLEIACVEPDPEEEEEERPPAPIKLEKVESDNLPEKKQAIPDPEKKREPPKVEPQTATPIKREPIKVEANSESTEDIYEFKEPEPFEFEVRNKRDSGGSTGSNTDKEKEKEKDKEKTKKRVFEEDLKSPKKRQKTFNAANVPAKAEPKTEGSPNENADSKKKPRKMFKKSDDITEEADNEGEDIASTSRDLSKFYSANYSGMAFKRRGAFGASNRGMDENFTDDTNEIATEDKDKSKKTVSEEDKSPKKRQTKAFTGSTTPKPSETKVETSVLESVDNKKKVRKMFWKGSNDDNDEPDETSKDSVKFYSNYSGPKALSGKQMETDEVVDNSVSESKEKPKKTGEEDTVKNSKKRQKTLASATPKTEANTNENPDVKKKITRRPAAKKAEEINDDESGSDGADETITTRDHVKYYSHYSGPKAKAAAIANDENASDRLAAKLDAQVSETAKVLQHSANIPQTPNKEDNKPKSGEPTASTSSLTDTKQGISAADKKRISEVVSSNKTETKPEMKPLDFTPIVPHSLPVPAPISARLPATASIEEKLSAAAVFRSKLKDTKKDDDSDSMTRKILIKETMKKSEAAIAKKVREKDESKIKHEPEKKKPQPMEPVIVKKDPLQEIELRKDPLLEVIKKKEEEMAKAKKEADMKPNIVVATTPVTKTYGNQKKEQVTKIEETWKKAAVATAMAASRNEEVTVAVSGGDADKDYMNVRKETIVSKIKSSIDRDSVDSTDSSDSERRLTIIDSEDFPDDKCNESGSENKTKTSLPSTSSGGPYNNITQPEHATVLTIHGEVSQQIGVPSVISTIIQAKSSKMEEDGENLNSLLCEEEIPGSPTPGSETLDQEHRTTSSQNLLKSDLGSKMAVAFVAAQLPLSTVGSSAQLTNCAMVTTMSSSLTVTQSTNSIVAVSMVPHSSMQSIQRPQSQSQPQPQSQPQQQQQLQPQPQQLQQPPHQQQQHQLHQQPKPQLQPQPKLQPQPQLQLQSQLQPQPQPSVQIQHQHQHQQQQPLQQQQQPQQQQQQQQQQQLQQQQQQQQHQQQQRHHHEHAVPIPVPTHRRESNEADPVMDNTPPTTPDSIISNISGSPRDERIGGSTPSSSEDNSKLNRDSSEAENDSGGKGSAPGYSEDDGSLINSEHGGNGGATSSSSDRIPKPPAKRSLADADGVTPKKRKKRKDQDTSSTNQSIASGKKSPRQSTRNTRHGTGSDSDTSEGSNQCINNSSQQVGNGTPMVSSTSGSSTNNMPVPGMTNTNGDIGNYSNRSPRPTKYNFFIDMDPDLDGSQRISVLQQRLSELRKTYNSVKVELAGIERRRKKLKRREREAQKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00712635;
90% Identity
iTF_00714160; iTF_00712635;
80% Identity
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