Basic Information

Gene Symbol
Arid4b
Assembly
GCA_900480045.1
Location
UXGC01000127.1:236217-244561[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-28 5.2e-25 88.4 0.2 1 89 307 394 307 394 0.95

Sequence Information

Coding Sequence
ATGTTGGGGGACGATCCGCCTTATCTGTCGGTGGGCACTGAGGTCAGTGCCAAGTATAAAGGAGCCTTCTGCGAGGCCAAGATCAGAAAGGTTGTGCGTAGCGTCAAGTGTAGAGTGACTTACAAGCAGGGCTTGGGGACAGCTACTGTCACTGATGATCAGATCAAAGGAACTCTTAGAGTCGGTGCCTCTGTCGAAGCTAGGCATAACGATAGAAAAGACTTTGTTGAAGCTACCATTACTAAAATACAAGACTGCAGTCAGTATACTGTAGTGTTTGATGACGGTGATATTACAACGCTTAGAAGAACTGCTCTATGTCTAAAAAGTGGGAGACATTTTGCTGAAAGTGAAACTTTAGATCAATTGCCTCTGACTCATCCGGAGCACTTTGGAAATCCTGTGATTGGTGGGAGGCGTGGTAGGAGATCTCGACAAACACAGGATGATAGTAgtgatgatgaagatgatggTGCAAGAGGTAGCAATGATTCTGGATCTGGTTCTGGTAGCAAAGAAGGACCAGAAACAGAACCAGAAATTGGAAGAGTTGTTTGCGTGGAGTTGGGtgacaagaagaaaaaagataattggTTTCCTGGTTTAGTTGTGGCTCCAACTGCTCAGGATACTGTAAGAATACGAGTTCGTGATGATTATCTTGTGCGATCTTTTAAAGATGCTAGATAtTACACTGTGCCGAAAAAAGAAGCTACTGAATTTACCAAGGATTTggtcaataaagtagaaaacagTGCATTAAAAGTAGCTGTGGAAaaagctttattatttttagagaagAATGAACTACCCCCTCATTGGGATCGTGATTCTCTATttggaaattcaatttcaacaGATAACAGTGACTCAGTGGGAGAACTCGACACAGATAGTTCGGATGATGAGCCACGAGAAGAAAAGGATCATTTCGTTGCACAATTGTATAAATTCATGGATGATCGGGGCACGCCCATAAACAATTGCCCGATGATTGGCAACGAAGATATCGATCTTTACAGATTATTCCGTGCAGTTTACAAACTTGGGGGCTACAACAGGGTGACAAATCAAAATCAATGGAAATTAATAACCCGGCGACTCAACTTTTCTATGCAAAACAACTCGTCGACGCACAATTTAGTGAAGCAAGCTTACAAGAAATTCTTGCACTCGTTTGAAGacttttatagaaaattaggATGCACCATGGTGAATCATCCAAGAGGCAGTACAAGAAAACAACGTCCTGGTCGCAGCTTAATTCGAGATAAGGATAGAAATACCCCTGTCCCAACTCAAGACAAATCAgtgaagaatgaaaaagaggatgaagaaaaagagaaaaaagctaGCACTGCAGCAGATGAAGaagttaaaaaggaaaaacgggAAGTCAAGAAAGAGCCAGCAGTAAAGGAAGAAGAGTCACTGGTGAAAGTAAAACGGAAAGAAGAGCCTGCAGAGGAAAGTGGAAGTGGCCAGGACAGTGACGTAAATGTTGAGGGTGAGGAAGAGTCTTCCAGCAGTGAAAAATCGCAGAAAAGTACGTCAAGATTAACTCCGTCAAATGTTGGTGCCAAATCCAAAGCAACAGCCGCTTTAACCGCCAAAACTAAAGAAGAACCGGTAAGGAAAAAGCCACCACAAGAGAAAAAGCGCCCCGAAGTAAAGaaacaagaaaagaaagaTGAGAAATCTAAGGAGGACGATAGCACAAAAACTAGATCTAAGTCCAAAGAGGATGTAATGAAGGCTAATAAGCCAAACTCCGATGCAAGAGAGACAAGAACACCTTCAAGGGAATCTGACAAAAAGGCCTTTGCCAAACAGAGAAGAATGACTGaagaagaattaaagaaacgaggaagaaagaaaaaagagactGAAGGTGAAAAAGGACGAGCTCCCGACGATCGGTCAGTTGAATATGCACCGAGTTATAAGGGACCTGTCGAGATTGGTGATAGACTAAAAGTTTATTACGGACCAACGCATGAATCTAAAGTTACATACGAAGCTAAAGTCATTGATATGGAGAAAGATGGATCTGAGGCCGTTTATTTAGTTCACTATACAGGATGGAACacaagaTACGACGAATGGATTAAGACTTCGAGAATCGCTCAAAACTTTACTCAGGCTCAAGGTCGCGTAAAGCGTACAAAGGCAACTCCTCGGCCGCAAACTCCGGGTGCGAGTTCCTCTTCATCGAAATCGAAAACAGCAACTGCTCCAAATGCAGGAACTGGAGCCTCATCTACAGCATCCGGTGCTCAGAGTCGTCGTCGTGCGCAGAGCGTAGCACCCACGAGCGGCGCCTCCAACAATAAAGATGCGCGAAAAGAAGATCGTGAAGGTACTCCGGCGACTCGCTCGACGACACCGTCACCTTTAACTTCATGCATTTCACGAACGAAGAGTCCTGCGACAACAGCAAACAGCAGACCTACCCGTACGACAAGGAATGCAGATTCAGCCCTGGCGAATGACATGAGTAGGCGGACGAGGAGAACATCGGGTCACACTGATGCCATGGCTGCTGAGGAGTCCGAAAGCGAGGATACAGATTCGATGGATTCGGATGCTAGTGCTGAGCCCGAAACAACGCAAATTCAATCAAGGTCGAGAAGAGGTGGTGGTGCTCAGGATAGGAATCGCCGGGAGGCAAGGCGGAGGGCCGAGAGTCGCATGAAGATGGAGGAAACGAGCGAAGGAGAAATGGAGAAGGACGTGGAAGAACCGCGAAGAGGCAGACGGCTGAGAAAGATGATAGGTAAACTGCACGAAGTGAAGTCCGAACCAGAAAGTGATGAGGAGCAACCAAAAGGAAGAGATTTTGACTTGAATCAAATCAGATCGGAACTCAAGGGTTTTGATAAGGCCGTAAAGTTGGAAATTGCTTGTGTTGAGCCGGACCcggaagaagaggaagaagaagaccCTCCTGCTCCAATCAAACTAGAGAAAGTTGAGTCCGACAATCTTCCAGAGAAAaagGCAATTCCAGATCCCGAGAAGAAGCGGGAGCCACCAAAAGTCGAGCCACAAACAGCAACACCTATCAAACGAGAGCCTATTAAGGTAGAAGCTAACTCTGAAAGTACAGAGGATATTTATGAATTCAAGGAACCCGAACCGTTTGAGTTCGAGGTACGCAATAAGAGAGATTCAGGTGGCAGTACCGGCAGTAATACTgacaaagaaaaggaaaaggaaaaggacAAGGAAAAGGCAAAGAAACGTGTCTTTGAGGAGGACCTTAAGAGTCCGAAAAAGCGGCAGAAAACATTTAATACTGCAAACGTTCCAGCAAAGGCAGAGCCAAAAACTGAAGGCAGTCCTAATGAAAACGCGGACAGCAAAAAGAAACCCCGGAAGATGTTTAAGAAGAGCGACGATATTACAGAAGAAGCTGACACCGAAGGCGAGGATATCGCCAGTACTTCGAGAGACCTTTCCAAATTTTATTCCGCTAATTACAGCGGAATGGCATTTAAACGCAGAGGAGCTTTTGGTGCTTCCAATCGAGGTATAGACGAAAATTTTACCGATGACACTAACGAGATCGCTAGCGAGgacaaagataaattaaagaaaactgcATCAGAAGAAGATAAAAGTCCCAAGAAACGGCAGACAAAGGCATTCACAGGTTCAATGACACCCAAACCCAGTGAAGCAAAAGTGGAAACTTCTGTCCTAGAAAGTGTTGataacaagaaaaaagttCGCAAGATGTTCTGGAAAGGGACAAATGATGACAATGAGGAACCTGACGAGACTAGTAAagattcagtaaaattttattcaaattacagTGGACCCAAAGCTTTGTCTGGTAAACAAATGGAAACCGATGAAGCAACCGACACTTCTGTAAGTGAAAGCAAAGAAAAGCCAAAGAAAACTGGCGAAGAAGAAACGGTGAAAAACTCCAAAAAGAGACAAAAGACTTTAGCATCCGCAACTCCAAAGACGGAAGCAAATACCAATGAAAACCCTgatgtgaaaaagaaaatcacgcGGAGACCAGCAGCTAAAAAAGCTGAAGAAATTGACGACGAAAGCGGAAGCGATGGGGCAGATGAAACAATAACCACAAGGGACCACGTTAAGTATTACTCTCATTACTCCGGACCGAAAGCAAAGGCAGCCGCAATCGCAAATGATGAGAACGCATCGGATCGCCTTGCAGCGAAGTTAGATGCTCCAGTAAGTGAAACCGCGAAAGTACTTCAACATTCGGCGAACATTCCTCAAACACCAAACAAGGAAGACAGTAAGCCAAAGAGTGGAGAACCAACTGCATCCACGTCCTCGCTTATCGACGCGAAACAAGGTATTTCAGCAGCTGATAAAAAGCGCATTCCTGAAGTAGCTTCTTCGAACAAAACCGAGACGAAGACGGAGATGAAACCACTCGATTTTACACCCATTGTTCCACACTCTTTGCCGGTTCCAGCGCCTATCAGCGCTCGACTACCAGCGACAGCGAGcatcgaagaaaaattatcagcGGCCGCAGTATTTCGCAGTAAGCTAAAGGACACGAAAAAAGAGGACGATTCGGATTCAATGGCGAGAAAGATTCCCATTAAAGAGACTATGAAAAAATCTGAAGCGGCTATAGCGAAAAAAGTGAGGGAAAAGGATGAGAGCAAGATAAAGCACGAGCCTGAAAAGAAGAAACCACAACCAATGGAACCTGTCATCGTGAAGAAAGATCCTTTACAGGAAATAGAGCTGCGTAAAGACCCGTTGCTGGAggtgataaaaaagaaggaagaggagatggcaaaagcgaaaaaagaagcTGATATGAAACCTAACATTGTCGTTGCAACAACACCTGTAACCAAGACTTACGGTAATCAGAAGAAAGAACAAGTTACCAAGATAGAGGAGACCTGGAAGAAAGCTGCAGTGGCTACAGCGATGGCCGCTTCAAGGAACGAAGAAATTACGGTTGCAGTATCAGGTAGTGATGCAGATAAGGACTATATGAACGTTCGCAAAGAAACGATCGTTAGCAAAATAAAGTCTAGCATAGACCGAGATTCAGTTGACTCCACAGACAGCAGCGACTCCGAAAGGAGGCTCACCATCATCGACAGCGAGGACTTCCCCGATGATAAGTGTAATGAGTCTGGCTCTGAAAATAAAGTGAAGACGTCCATACCGTCGACCTCCACTGGAGGACCATACAATAACATAACGCAGCCAGAGCATACTACAGTTTTGACTATTCACGGGGAAGTGAATCAACAGATCGGTGTTCCCAGCGTGATCAGCACTATTATACAAGCAAAAAGCTCAAAGATGGAGGAGGACGGTGAAAATCTGAATTCGCTACTTTGTGAAGAAGAAATTCCAGGGTCACCAACGCCAGGTTCGGAAACGTTGGATCAAGAACATAGGACAACTAGTTCACAAAATCTTCTTAAGTCTGATCTCGGAAGCAAAGTGGCTGTCGCATTTGTAGCTGCTCAATTACCACTGAGTACTGTAGCAACTTCTGCACAGTTGACGAATTGCGCTATGGTTACGACGATGAGCAGTGGTTTAACGGTAACTCAAAAAAGCAATGAGGCGGATCCAGTTATGGACAACACTCCACCAACGACGCCTGACTCAATCATTTCCAACATTTCTGGTTCACCGCGTGATGAGAGGATAGGTGGTTCAACACCTTCTTCATCAGAGGATAATTCTAAGCTCAATCGAGATAGCTCTGAAGCCGAGAACGACAGTGGAGGCAAGGGTAGTGCACCGGGATACAGCGAGGACGATGGTTCTCTCGTCAATTCAGAACATGGGGGTAACGGTGGAGCTACATCTTCTTCTTCCGATAGGATACCTAAACCACCAGCAAAGAGATCGCTTGCTGACGCTGACGGTGTCACTCCAAAAAAGcggaaaaaacgaaaagatcAGGATACGTCGTCTACCAATCAGAGCATTGCCTCGGGGAAGAAGTCACCACGGCAGAGTACGCGGAATACTCGTCATGGTACCGGAAGCGATAGTGATACCAGCGAAGGATCCAATCAATGCATAAATAACTCAAACCAGCAGGTCGGTAATGGAACACCGATGGTTTCCTCGACAACATCAGGCtctgcaactaataatatgcCTGTACCGGGAATGACCAATACCAATGGAGATATCGGAAACTATTCCAACAGGTCACCGCGGCCTACCAAGTACAACTTTTTCATAGATATTGATCCCGATTTAGATGGAAGCCAAAGGATATCAGTCCTTCAGCAAAGGTTGAGTGAACTTCGAAAAACTTACAATTCCGTAAAAGTGGAACTAGCTGGCATCGAAAGACGGAGgaagaaattaaaacgaaGAGAACGCGAAGCACAAAAAGCAGCAAAGGCTGAAATGCAACAGGCATGCTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDDQIKGTLRVGASVEARHNDRKDFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQTQDDSSDDEDDGARGSNDSGSGSGSKEGPETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKDLVNKVENSALKVAVEKALLFLEKNELPPHWDRDSLFGNSISTDNSDSVGELDTDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGNEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLNFSMQNNSSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDKDRNTPVPTQDKSVKNEKEDEEKEKKASTAADEEVKKEKREVKKEPAVKEEESLVKVKRKEEPAEESGSGQDSDVNVEGEEESSSSEKSQKSTSRLTPSNVGAKSKATAALTAKTKEEPVRKKPPQEKKRPEVKKQEKKDEKSKEDDSTKTRSKSKEDVMKANKPNSDARETRTPSRESDKKAFAKQRRMTEEELKKRGRKKKETEGEKGRAPDDRSVEYAPSYKGPVEIGDRLKVYYGPTHESKVTYEAKVIDMEKDGSEAVYLVHYTGWNTRYDEWIKTSRIAQNFTQAQGRVKRTKATPRPQTPGASSSSSKSKTATAPNAGTGASSTASGAQSRRRAQSVAPTSGASNNKDARKEDREGTPATRSTTPSPLTSCISRTKSPATTANSRPTRTTRNADSALANDMSRRTRRTSGHTDAMAAEESESEDTDSMDSDASAEPETTQIQSRSRRGGGAQDRNRREARRRAESRMKMEETSEGEMEKDVEEPRRGRRLRKMIGKLHEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKLEIACVEPDPEEEEEEDPPAPIKLEKVESDNLPEKKAIPDPEKKREPPKVEPQTATPIKREPIKVEANSESTEDIYEFKEPEPFEFEVRNKRDSGGSTGSNTDKEKEKEKDKEKAKKRVFEEDLKSPKKRQKTFNTANVPAKAEPKTEGSPNENADSKKKPRKMFKKSDDITEEADTEGEDIASTSRDLSKFYSANYSGMAFKRRGAFGASNRGIDENFTDDTNEIASEDKDKLKKTASEEDKSPKKRQTKAFTGSMTPKPSEAKVETSVLESVDNKKKVRKMFWKGTNDDNEEPDETSKDSVKFYSNYSGPKALSGKQMETDEATDTSVSESKEKPKKTGEEETVKNSKKRQKTLASATPKTEANTNENPDVKKKITRRPAAKKAEEIDDESGSDGADETITTRDHVKYYSHYSGPKAKAAAIANDENASDRLAAKLDAPVSETAKVLQHSANIPQTPNKEDSKPKSGEPTASTSSLIDAKQGISAADKKRIPEVASSNKTETKTEMKPLDFTPIVPHSLPVPAPISARLPATASIEEKLSAAAVFRSKLKDTKKEDDSDSMARKIPIKETMKKSEAAIAKKVREKDESKIKHEPEKKKPQPMEPVIVKKDPLQEIELRKDPLLEVIKKKEEEMAKAKKEADMKPNIVVATTPVTKTYGNQKKEQVTKIEETWKKAAVATAMAASRNEEITVAVSGSDADKDYMNVRKETIVSKIKSSIDRDSVDSTDSSDSERRLTIIDSEDFPDDKCNESGSENKVKTSIPSTSTGGPYNNITQPEHTTVLTIHGEVNQQIGVPSVISTIIQAKSSKMEEDGENLNSLLCEEEIPGSPTPGSETLDQEHRTTSSQNLLKSDLGSKVAVAFVAAQLPLSTVATSAQLTNCAMVTTMSSGLTVTQKSNEADPVMDNTPPTTPDSIISNISGSPRDERIGGSTPSSSEDNSKLNRDSSEAENDSGGKGSAPGYSEDDGSLVNSEHGGNGGATSSSSDRIPKPPAKRSLADADGVTPKKRKKRKDQDTSSTNQSIASGKKSPRQSTRNTRHGTGSDSDTSEGSNQCINNSNQQVGNGTPMVSSTTSGSATNNMPVPGMTNTNGDIGNYSNRSPRPTKYNFFIDIDPDLDGSQRISVLQQRLSELRKTYNSVKVELAGIERRRKKLKRREREAQKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_00713485;
80% Identity
-