Eadl007663.1
Basic Information
- Insect
- Eurytoma adleriae
- Gene Symbol
- -
- Assembly
- GCA_900480045.1
- Location
- UXGC01000129.1:112856-116916[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 3.9 4.1e+02 2.5 3.6 1 20 145 163 145 168 0.89 2 13 0.036 3.8 8.9 0.8 1 23 171 193 171 193 0.96 3 13 0.0049 0.52 11.6 0.6 1 23 201 223 201 223 0.98 4 13 0.0006 0.064 14.4 0.4 2 23 782 803 781 803 0.97 5 13 0.3 31 6.0 0.8 1 23 810 833 810 833 0.95 6 13 0.007 0.74 11.1 0.2 1 23 837 860 837 860 0.94 7 13 6.9e-05 0.0073 17.4 0.1 1 23 864 887 864 887 0.92 8 13 0.4 43 5.5 7.2 1 23 891 914 891 914 0.94 9 13 0.00014 0.015 16.4 4.0 1 23 918 941 918 941 0.97 10 13 0.00047 0.049 14.8 0.4 1 23 948 970 948 970 0.98 11 13 4.7e-06 0.0005 21.1 0.7 1 23 974 996 974 996 0.98 12 13 0.00014 0.015 16.4 0.2 1 23 1004 1026 1004 1026 0.98 13 13 0.00045 0.048 14.8 0.5 1 23 1032 1054 1032 1054 0.98
Sequence Information
- Coding Sequence
- ATGTCTAGCTGCACGAGCGACATTAAGATCGCGAACGTCTTCACGTACCATCAGGAGCTCATGAAAAGCGAGCCCGAGGAGGGTCCGAAAACACTGCCCAAGTTCTACACAATCTACCTCAACCCACACAATGGCAACAGCTACTCGAATTTGAAGAAGAGAAATCCCTTCCACGGGATGAAGAGGAGGCGCACGAGAAGGTGCCGGGATCCTCTGCGCCTGAGCGACAAGGAGAACGCAGTGGTGCCACCGGTGAGGGTAAAGCAGGAGTTCGACGAGCCTCTGCCGGCCTTGTTCTGCGAGATGCCGACCGAGGACTTTACCTGGCAGCCGCTGAACAAAATCAAGCGCGAAAAAgactcgcgctcgcgtcgGAAAAACACTCGCAGAGGCGTCTGCGCGAAATCGCGGCTGCGCCGGCTCACGTTCTGGTACCCGTGCGGCGAGTGCCAGTGCATGTTCCAGTGCGGTCAGCTGCTCGTTCACCACGTGATCAAAGACCACCCGTACTATTACTGCGGACAGTGCAGCGAGTTCGTGAAGAATCGCAACGCCCTGAAGGTTCACTTTCAGGAGCACTTCAGGAACCGAAAGGCGCCGTTCCAGTGCGACGAGTGCAGCATGTCGTATAAACAAATTCTGTCTCTGGTAAATCACAAAGAGACACACACGAACTACAAACTCCCAGCGAAATTGGTGATGTCGCACAAGGTTAAGCTCGATCCTTACGAGGAGGAGGAGTTATTCAATGACGCGGCCAGTGTAAATTCGGCACTAGACCTCGATGACGATTACGATCGTTTGGATCAGACATACTATATACGAGGACCCAACAAGAAAATCATAACCGTCAAAATAGAAAGCGATATAGGGTCGAAAGAAAATCTTCCAAAAATACAGCAACCGCTCCTTGTAGTGAATACTCTTCAGAAACAGCTTGCGCAACAAGCAGATTTGTTGTTGCACAATCAGGGTCAGTCGCAGCAGCATATGATTAAGCTGCTGAAGCAGTTAATGCTGCTGCAGCAACCGCAGGTGCCAGGTCAGCTTATCGTGTTTCCTCTAACGCAACCTCAACCTCAGCCTCAACCGCAAACGCAAACGCAATCGCAAGCTAACAACACCCAATCTGAACCTGATCCAAAGTCGCAAACCCAAGCTACGCAGCCTCCAGTAGAATGCAATCATGAAGCACAAAGCCAGGGGTGTACAGCGCAAATTTTGCTTGCTCCTAAAGATAACCCACAGCAGTCATCGCCTACGCAGCTTGTACCTAATCCTGAACCTGTACAAAAGAAACAGGCAACACCGTCATTACCTCAGCTTTCACCTGATTCCCAACCGCAAGTACAGGTTTATACTGAATCTGAAACCCGGCCGCGACAAAATGTTTTAGAGCAGCCTGAGCCTGATGTGGAACCGCGAATTTTGATTGAAGTTAGACGTCCATCGCAGGAGCAGGTGTTACAGCTACCGCAGGCACCATCACAAGAGCAGAATTTGATGGAAACTGAAATACAACCGCAGCCCTCGCCACAGCCGCGGATTTTGATTGAAGTTAAACATCCATCGGAGCAGCAAGTATTACAGCAACCGGACTCGCAGTCAAAGAAGTCGAATTCGAAAGAAATTGTAGTACAACCGCAAGAGCAGCTTTCAAACGAATCTGAAAATCAACCGCAGAATTCAGTTGAGCCTCATCAGGATTCACTGCAGCAGCATGTCGTCATGATAACTGTACCTCCTTTGCAGTCCGACATGGAGTGTTTCTTTGAACCCCAACCGCCGTCGGTCACTAGATCTCATTCTCCATTACAATCACAATTGAGTGCACATCCTGAATCTGCACAAAGCGATTTGATTTCTCTCAATCAAGTTCCAATCGAACATTCTGAATTACAGTATGCTTTAGAACCTCCGCTTGATCTCGAAGAACAgcaaactttgttttttgaaaacatGCAAGCAATGAACATCGATAGCGCTCAAATGTCAGTAGATTTAGCAACCAATGAACCAGTTCAAAAGATAATCCACAGTATTCCAGAGGATTTGGAAGAGGAGTATATTTTACAAGAGTTTAGGGAACTAGAACTTGAAAGGGATCTGTTGCAGGAAAATGAAGAACAGGTATCAGAGTTTCTAATATTCCACAACTCATTCGATGATTCAAGTATCCTTCCAACAATTCCAAACGACGAACACTGCGATAATATGAAATCAATGGATATAGATGATGTCTGTCGACAGATGGATAACGGCAGCTTCCAGTGCAGATTTTGCAAGACCGTACATATCCATCGTCGTCATATAGTGCAACATATTAGAAACGTACACGAAGTCAGGTGCAAAATTTGCAATGAGAGATTTAGAGGTGTACGTGACTACAAAGCTCACATGGCAAAGCACCGAAGGAATGAAATGGTGTTCGCGTGCGACCAATGCAACGTCGAAACAACAAGTCAACAGCTCTTGGATTATCACCGCAAGCAAAAACACAGCGCAGAATATATATGTGGCATATGCAGCATGAGGTTCGATCTAAAGAGCGAACTCCAAGGCCACCTATCCTACAACCACAGCTTGCACTTCGACTGCGAAGTGTGCGGCAAGGATTTCGAGATGAAGAGCGAGCTTCAGGCCCACTTGATCGACAGTCACCGCGAGAAATTCGTCTGCAACGAGTGTTGCAAGTGCTTCGGGAGTAAGCGTGAGCTTAAGGACCACGTGGTCAAGTGCCACACCGAGACCTTCATCTGCAGAATCTGCGAGGAGTCGTGCCGCAGCAAGCGGCACTTGCAAGCTCACTACAGAACGGCGCACCCCACGGTCGACTTCGGGTATCCGTGCAGCGTATGCAAGCGCACCATGGCGACCTCCGACAGCCTGAGAAAGCACCTGGCAAAGCACAAGCAAAAATTCAAGTGCCCCGACTGCGACAAGGTCTTGAGCACCTTCTACTGGCTGACGAAGCACCTGGAGAAGCACCGCAGGAAGCGCCAGCGCACCTATCCCTGTTCCGAGTGCGACAAGGAGTTCTCCGAGGAAATAATGCTGAAGATGCACTTGCTCAAACATGCCGGTATAAAGCCCTACCAGTGCAACATATGTGGCATGCGATATTCTCAGCGGACCCCGATGATGAACCACTGGAAACTGCATCCTAGCGCCGACGAGACTAAGCCGCCACCGAAAGTCCACCTGAAGCCGCTGTTCAAGAAAGCCGAGGAGAGGATTTTGGAGCGCAGGATGAGAGCCAAGAAGAATTTTTAG
- Protein Sequence
- MSSCTSDIKIANVFTYHQELMKSEPEEGPKTLPKFYTIYLNPHNGNSYSNLKKRNPFHGMKRRRTRRCRDPLRLSDKENAVVPPVRVKQEFDEPLPALFCEMPTEDFTWQPLNKIKREKDSRSRRKNTRRGVCAKSRLRRLTFWYPCGECQCMFQCGQLLVHHVIKDHPYYYCGQCSEFVKNRNALKVHFQEHFRNRKAPFQCDECSMSYKQILSLVNHKETHTNYKLPAKLVMSHKVKLDPYEEEELFNDAASVNSALDLDDDYDRLDQTYYIRGPNKKIITVKIESDIGSKENLPKIQQPLLVVNTLQKQLAQQADLLLHNQGQSQQHMIKLLKQLMLLQQPQVPGQLIVFPLTQPQPQPQPQTQTQSQANNTQSEPDPKSQTQATQPPVECNHEAQSQGCTAQILLAPKDNPQQSSPTQLVPNPEPVQKKQATPSLPQLSPDSQPQVQVYTESETRPRQNVLEQPEPDVEPRILIEVRRPSQEQVLQLPQAPSQEQNLMETEIQPQPSPQPRILIEVKHPSEQQVLQQPDSQSKKSNSKEIVVQPQEQLSNESENQPQNSVEPHQDSLQQHVVMITVPPLQSDMECFFEPQPPSVTRSHSPLQSQLSAHPESAQSDLISLNQVPIEHSELQYALEPPLDLEEQQTLFFENMQAMNIDSAQMSVDLATNEPVQKIIHSIPEDLEEEYILQEFRELELERDLLQENEEQVSEFLIFHNSFDDSSILPTIPNDEHCDNMKSMDIDDVCRQMDNGSFQCRFCKTVHIHRRHIVQHIRNVHEVRCKICNERFRGVRDYKAHMAKHRRNEMVFACDQCNVETTSQQLLDYHRKQKHSAEYICGICSMRFDLKSELQGHLSYNHSLHFDCEVCGKDFEMKSELQAHLIDSHREKFVCNECCKCFGSKRELKDHVVKCHTETFICRICEESCRSKRHLQAHYRTAHPTVDFGYPCSVCKRTMATSDSLRKHLAKHKQKFKCPDCDKVLSTFYWLTKHLEKHRRKRQRTYPCSECDKEFSEEIMLKMHLLKHAGIKPYQCNICGMRYSQRTPMMNHWKLHPSADETKPPPKVHLKPLFKKAEERILERRMRAKKNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00713859;
- 90% Identity
- -
- 80% Identity
- -