Eadl029007.1
Basic Information
- Insect
- Eurytoma adleriae
- Gene Symbol
- -
- Assembly
- GCA_900480045.1
- Location
- UXGC01000387.1:122586-128722[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.16 17 6.8 3.7 1 23 337 359 337 359 0.97 2 19 0.0072 0.76 11.1 0.3 1 23 408 430 408 430 0.98 3 19 0.02 2.1 9.7 0.2 1 20 480 499 480 501 0.93 4 19 0.0056 0.6 11.4 1.6 3 23 543 563 541 563 0.96 5 19 4.6e-05 0.0049 17.9 0.2 1 23 605 627 605 627 0.97 6 19 0.00018 0.019 16.1 0.1 1 23 633 655 633 655 0.98 7 19 6.6e-05 0.007 17.5 2.9 3 23 701 722 700 722 0.95 8 19 0.00031 0.033 15.4 1.7 2 23 730 752 729 752 0.95 9 19 0.00015 0.016 16.3 1.0 2 19 788 805 787 810 0.89 10 19 0.00019 0.02 16.0 1.6 1 23 842 864 842 864 0.93 11 19 0.044 4.7 8.6 0.1 2 20 922 940 921 940 0.95 12 19 0.0008 0.085 14.1 0.2 2 23 959 980 958 980 0.96 13 19 0.17 18 6.7 4.3 1 23 1015 1037 1015 1037 0.96 14 19 0.045 4.8 8.5 3.1 1 21 1055 1075 1055 1079 0.89 15 19 0.1 11 7.4 0.6 2 23 1137 1159 1136 1159 0.93 16 19 0.024 2.5 9.4 3.6 3 23 1188 1209 1186 1209 0.90 17 19 0.0002 0.021 16.0 0.2 1 23 1216 1240 1216 1240 0.96 18 19 0.015 1.5 10.1 2.2 1 23 1245 1268 1245 1268 0.97 19 19 0.018 2 9.8 0.3 3 23 1300 1321 1298 1321 0.95
Sequence Information
- Coding Sequence
- ATGGACGACGTGGTGGAGATCAGTAGCTTGGAAAACGCCTGCAGGTTATGTCTCACGACCGAGCAGACGCGCTCCTCAATTTTTGGCGTGCCGCATGTATCTGTCCCCTTCGCCGAGAAGATACGTGCTTGTCTTTCGATTCAGatATCTGCAAATGACAAGTTGTCAACACTAGTATGCGCGACTTGTATAAAGAATGTGAACCACTGGCATTCTTACAAAGATACATGCTTGAAATCACAGGAGAGGCTGCAGCAATGGTTAACCAAACAGAATTTTGTTCAAccTATTGTCACAATAAAAGAAGAACCAGTAGATGTAGAATTTCAAGatgataatttacaaatttcgaCAAACGATTCTAATTCTGCAAATGTACCAACTGTAGAAAATAATACAGTTCAGGATACAGAGAATAGTTCATCTGTTGCAAATACTGCAGTTGAAGCATTACCACAAAATCATAAAGATAGTGAAGACTTTCCAGTATTACAAGTAAAAACTGAACCTCTTGACACAGAAGATGAAGATGACTTTAATGTGGATGTAGAGTCTATTAATAGTGGAGAACTACTAATAAATCCATTAGCAGTAGGGGTAGTTAATAGCGTTAACAATGATAGAATCATGGAAGCTGATTCAactcaaaaattcaaaacgaaGAAGTATGGAAGAAAGAAATTCCGTCGTGGTCCTCATACTCACTTTAGAGGGGCTCGattgtttaagaaaaagtgtattcattgtaaaatttacttgcaCTCCAAGTATTCTTATCAACAACACATGTCTAGGTATCATGGCATTGTCAACAATGTAGGAGCAAATAGTGCTCCTAAGCTTCCTGCAGTAGCAGCACCATCAAAGTCAAAACTAACTGAACATTCAATCAATATGGAGGTTGAAGATATTCctgattataataaagaagatgctgaatttataaaaatgataaaaactgATCCACTGACTCcagttcaaaaaagtattatagGTCAACTTAAGACTTTTTCTTGCTACTCGTGTAAGCAGACTTTCTTTGATCGACGTCAGACTCTAAATCACATAAGACAACACATGACACATTTACGGCCGTTCACTTGCATTGCTTGCCTTTCTGAATTTTCAGATAGATCTACGTATAAGTTACACTGTGGAGCATCTTTTGAGTGTGCAATGAAAATTGCTCTAGTTGTTCCTAAAGTtggtgaagaaaaatatttcacctGCAATATGTGTTTAAAACCATTGAACAATCGACAAGAGCTCTTGACGCACTTAGCTATGCATTCtgacaaacaaaataaagatttacgACCTCCACCAAAACTGAAGCCTATAACTCCAACGACAACTTCTAGAATTGATGCACCTACTTTGAAgaaatcaatttcaaatgtGGCAGGACCTTACATGAATGGAGATCCAGCACATAATCACATGTGTGATCTTTGTGGAATGATTTACAGATACAAGCCTAATATGATCAAGCATCGGGAACTCTGCTTAACTTTATCAGAAAATACTAGAACTTCCTACAGATGTGTTCAATGCAATATGACTTATCTTGTgttcaaaaagttttacatTCACGTATTTTACGAACATAAAAAGCGAGAGATCATTTGCTTCATTTGTCATGAAAGGTTCACCTCTGGTGATGAGTACCAAGCTCATCATGAAACGCATCGTGAAATTGTCAACCCAGCAAATGCAGATGAAAATGTTAACGAAATATCGCAAAATAGTAGTACTATGGATTTAGACTCGAATGAAGAATCAAATCGTACAGAGGATGCAAGCGGAAAGCCTTTTAACTGTGCTCTATGCGGTGAAAATTTTGCAACAAAGAGTGAACTTACTGAACATAGAAATCTTCATCTCAAAGTGAAGATTTATTCATGCGTCGTATGTCGTAATATGTTTAGTAGCTCTGGAGCTTTGGAAGTGCACATGAAGGTTCATGGAATCGGTGATGCTGTTGAACAAAATGCTAATAATTCATGCGTTGAATATGGCCGAGGCCATCGGTCACAAAATTCGTCGCTTAACGAGTCTTCTTTATCTGCTACATCGGATCCTGGAGGTCGATTCAATCACTGCTATCAATGTGGCAAAAACTTCTCGAATTATGCCAATCTGAAAAGGCACGAACGAAACCTGCACATTAAAGCAAGACGGCGTTGGAGTTGCCACGATTGCAAGAGACGCTTTAAATCATTAGAGGCATATAATGAGCACTTGAGGCTGGATCACTCTTCAGAACCACAAGAACAACAACTTACTACTAATAtgAACATATTGTTTCAACAGCCTCCTGCCCAACCTCAAATATCTACGAGTACTGGTAAACCACTGATGCAGTGTCCAAAGTGTCCAAAGACGTTCGCATACCAGGGTAATCTTATTCAACACTGTCAGAATGTGCATAAGGAAAATCATTTTGAGCGTACAAAGTCAGCCGCCCCTGCGGTTCGCCGATCAGCACCACCTTTGTCACGCATCTTACCAGTGGCTCGCGGCCATTCGTGTAACGTATGTGGCAAGACTTTCCGAGAAGAGCAATCTTTGAAGACCCATCGTGGCTGGCATCTCCGAACGAATTACCGACTCAAGGCAGATAAAAATacaagtttaaatgaaaacttaaTGACTGGACCCGGATACACAATCAATCTAGCAAATACACCGAAACCAGCAAAAGCAAGGAAATCTTTCCCCAATAATCCTTCACAAAAGCAATTGAACTTGATTGGACCATTGCAGTGTCAAGTCTGTGACGATCGTTTCTCGGATGTAGCAGAGTTGAGAAAACATCTCTGGGATATTCACTGTGCCCGCAATAAACCCGAGAAGAATTTCGCAAGCGAGTTACAGTGTGAACTGTGTACTAACAAATTTTCTGATGAGGAGGCATTAAAAGAACACATGCAGTGGCATTCGGAAAACCCTATTCTTAGTTCTCCCAATACAAACAATAGTAATATTAACAGTATCGTTCAAGAGGCAAATTCCATTGTTTCTGAaccaccaaaaaaaaatttccactgtGATGTCTGCGGCAAATATTACAGCAAACGCAAAGTTTTCTTGAGCCATAAAAAACTTCACAAAGTTCTTCCTGCATCGATGATGAACTTCCAGTCTTTACAAAATAAGCGACATTACTGTGTTACTTGTCAGAAAAACTTTGCTAATGATGCCTCTTTAAAGAGACACAAGGCTTCTCCTTGTCATTTAAACAATGTCCGTGCACAAACGGCTATGCCAATGAAGAAGATAACAACCACAGCACTTGTACATCAGCCACCTGATGGAGATTTTGATCTATCGGCTGTAAAGAAGGAACCAGGCGTTGAAGATGAAGCTCCAAGTCAGCCAGCACCAGCTACAAAGAAGAGGCCTGTTACATGTCATATTTGCAGAATGATCTTCCCCAATATGAGCGTGTTATATCAGCATAAACAACTGGTGCACAAAGTGCATCCAAGTAAAGACAGGCTCGGTGCTGCAAGCACGAATGAGTGCGTGCCTCTTATGAGTCCCGAAGGTTTAGTTTGCTGCAACTTGTGTGGAAAGCAATTCCCTGGAATCTCAAATCTCAAGCAGCATTTCTCTCACAAACACAAAGTAAAAACTGCAACGTTCCCTTGCACTGCATCAGGCTGTAAACTTGTTTTCAGTAGTGCAAGCTCTCTCAAGAGTCACGAGTTGACACACTCAAGTATAATGTTCAATTGCCGTATGTGCGATAAGCACGTCTTTTCAAAAGTTGCCATTACCAAACACATGATGACCATGCACAAAGCGATTTATCAATCAGGAGTTGTTAAGAACACATTGTGGGCTGAAACAGACTTGGCATCTTACAATGTTAAGAATTGTCAAAGCACTGCCTGCCCGAAATGTAAAGTCAAGTACCCTAATTTACGAGCGCTGAAGATTCACTACATCAAGTTTCATGAAAATGGAGTGTAG
- Protein Sequence
- MDDVVEISSLENACRLCLTTEQTRSSIFGVPHVSVPFAEKIRACLSIQISANDKLSTLVCATCIKNVNHWHSYKDTCLKSQERLQQWLTKQNFVQPIVTIKEEPVDVEFQDDNLQISTNDSNSANVPTVENNTVQDTENSSSVANTAVEALPQNHKDSEDFPVLQVKTEPLDTEDEDDFNVDVESINSGELLINPLAVGVVNSVNNDRIMEADSTQKFKTKKYGRKKFRRGPHTHFRGARLFKKKCIHCKIYLHSKYSYQQHMSRYHGIVNNVGANSAPKLPAVAAPSKSKLTEHSINMEVEDIPDYNKEDAEFIKMIKTDPLTPVQKSIIGQLKTFSCYSCKQTFFDRRQTLNHIRQHMTHLRPFTCIACLSEFSDRSTYKLHCGASFECAMKIALVVPKVGEEKYFTCNMCLKPLNNRQELLTHLAMHSDKQNKDLRPPPKLKPITPTTTSRIDAPTLKKSISNVAGPYMNGDPAHNHMCDLCGMIYRYKPNMIKHRELCLTLSENTRTSYRCVQCNMTYLVFKKFYIHVFYEHKKREIICFICHERFTSGDEYQAHHETHREIVNPANADENVNEISQNSSTMDLDSNEESNRTEDASGKPFNCALCGENFATKSELTEHRNLHLKVKIYSCVVCRNMFSSSGALEVHMKVHGIGDAVEQNANNSCVEYGRGHRSQNSSLNESSLSATSDPGGRFNHCYQCGKNFSNYANLKRHERNLHIKARRRWSCHDCKRRFKSLEAYNEHLRLDHSSEPQEQQLTTNMNILFQQPPAQPQISTSTGKPLMQCPKCPKTFAYQGNLIQHCQNVHKENHFERTKSAAPAVRRSAPPLSRILPVARGHSCNVCGKTFREEQSLKTHRGWHLRTNYRLKADKNTSLNENLMTGPGYTINLANTPKPAKARKSFPNNPSQKQLNLIGPLQCQVCDDRFSDVAELRKHLWDIHCARNKPEKNFASELQCELCTNKFSDEEALKEHMQWHSENPILSSPNTNNSNINSIVQEANSIVSEPPKKNFHCDVCGKYYSKRKVFLSHKKLHKVLPASMMNFQSLQNKRHYCVTCQKNFANDASLKRHKASPCHLNNVRAQTAMPMKKITTTALVHQPPDGDFDLSAVKKEPGVEDEAPSQPAPATKKRPVTCHICRMIFPNMSVLYQHKQLVHKVHPSKDRLGAASTNECVPLMSPEGLVCCNLCGKQFPGISNLKQHFSHKHKVKTATFPCTASGCKLVFSSASSLKSHELTHSSIMFNCRMCDKHVFSKVAITKHMMTMHKAIYQSGVVKNTLWAETDLASYNVKNCQSTACPKCKVKYPNLRALKIHYIKFHENGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01380793;
- 90% Identity
- iTF_00713835; iTF_00714598;
- 80% Identity
- -