Basic Information

Gene Symbol
dmd-4
Assembly
GCA_900480045.1
Location
UXGC01000206.1:225621-228412[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.8e-26 7.3e-22 77.7 10.8 1 47 24 70 24 70 0.99
2 2 1.9 1.4e+04 -3.3 0.3 3 8 354 359 353 361 0.74

Sequence Information

Coding Sequence
ATGCTGCGGGGTAGTAAGTTGAAAAAGTCggaggaggacgaggaggGCGGCGCCGGCGAACCGAAGCAACGGAGACCGAAATGCGCGAGGTGCAGGAACCACGGGCTGATTTCGTGGCTGAGGGGCCACAAACGCGAGTGCCGATATCGCGAGTGCTTCTGCCCCAAGTGCTCGCTAATCGCCGAGAGGCAGAGAGTCATGGCTGCTCAGGTCGCTTTAAAAAGACAGCAGGCAGCAGAAGATGCAATCGCGTTGAGTATGGCAAAAGTAACAACTGGTCAGAAATTAAATCGGTTACCACCTGGCAAAATTTTTGGCATGACTGTAACTGAACCAGACACAAAAACCAAATCAAAGGCAGATTCTTCAACTACCtctacaaaaacaatttttagcgaaggaaaaagtgacgcgaaaaaggaacaaaatagTGCAGACTTGAACCTTTCAGTTTCTTCTAAAATATCGACCAAAATTTCGAAGTCAATAGTCGATTCAGAGAAAGCACCGTCGGAGCGCCGCTCCCCGGCGACGGTATCGCAGACGTCGGTGGAGACGCTGGCGCGCCTCTTTCCCGGCACGAAGTTGTCGGTGCTGCAGCTGGTGCTCCAACGCTGCGGCCAGGACCTCCTAAAGGCCATCGAGTACTTCGCCCGCGGTGGCTCGGAGCGCGCCTCGGCCTTCCGGCCGCCGAGCCGACCCCACCACGTCCAGGAGCTGAGCACCggagcgacgacgacgacgacgacgatgacCACGGCGCCCGCGGCGTCCCTTCAAATTCCCCTCGACAGGTCCACCGACGCCTACGCTTTGCCGCCGCTTTACTCCGCCAACCTGCACTCCGATGGATCTCTGGGCTGTTGTTTCGTGAACGTCGTCTCGGAGCCGGTGCCCAGGGGCCTGGAGGTGTGCGCGGCTGGATTTCCGCTGAGCGGCAAGCAGGCCACTTACGAGCGCAACTTCTTCGAGGCCGGATTGCAGCAGACGCAGCCGCAGCTTCCACAACGGCCGGTGTTTCACCTGCCCTCCTTCATACCGCGCATCCCCTGCGTGCAGCCCAACTGCCTGCTCTGCTACAAGTTCACTTGA
Protein Sequence
MLRGSKLKKSEEDEEGGAGEPKQRRPKCARCRNHGLISWLRGHKRECRYRECFCPKCSLIAERQRVMAAQVALKRQQAAEDAIALSMAKVTTGQKLNRLPPGKIFGMTVTEPDTKTKSKADSSTTSTKTIFSEGKSDAKKEQNSADLNLSVSSKISTKISKSIVDSEKAPSERRSPATVSQTSVETLARLFPGTKLSVLQLVLQRCGQDLLKAIEYFARGGSERASAFRPPSRPHHVQELSTGATTTTTTMTTAPAASLQIPLDRSTDAYALPPLYSANLHSDGSLGCCFVNVVSEPVPRGLEVCAAGFPLSGKQATYERNFFEAGLQQTQPQLPQRPVFHLPSFIPRIPCVQPNCLLCYKFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00713681;
90% Identity
iTF_00713681;
80% Identity
-