Eocc034413.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- -
- Assembly
- GCA_950022335.1
- Location
- OX465504.1:11438507-11441335[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-08 5.4e-05 24.0 0.1 1 39 16 55 16 61 0.90 2 2 2.7 1.7e+03 -0.1 0.1 24 39 846 861 845 863 0.86
Sequence Information
- Coding Sequence
- ATGCCACGTAATTACTCCCGTACCTCTTCGCGGGCCACTTCCTATACAAAAGAAGCGCTGCAATTAGCCATGCAGAGAATAAACAAAAAGGAGCTCACCTATGCAGCCGCTTCAAAAATATACGGCATACCTACATCCACACTTAGTGATAGAATCCTGAAGAAAACAGCAATAGTAAGTAATACCCTTGGCAGGCCGACAGCTATCCCAGTGGAATTAGAATCTAAACTGGCAAACTGCCTACGAACACTGGAAAAATGGGGTTGGGGGTTGTCAAGAGAAGAGGTACTCGATGTAACTcaggattttattaaaaaaactaaaatacaaaCCCCCTTCAATGATGGCAGACCGGGACCGGACTGGTTTATTTCTTTTCGTAAACGCCACAATTTGTCAATAAAAAAGCCGCAACCTGTAGAATaccttagaaaaaaaatgacagATCCGTTTGtaattcatgaatattttactcTACTCGAAAAGACGCTCAACGAGTTAAATATTTCGGATCCCAAGCAAATCTGGAACCTCGATGAAACTTCAGTTTGTCTCGATCCCACAAAAACTAAAGTTGTAGGTGCCAGAGGGGAGCCTTGTACACGAACAACTTGTGGAAGcgctaaagaaaatattacagttTTGACTACTGTAAATGCAGCCGGACAGAAATTGGACCCATTGATCGTATTTAAGGGCAAACACATGTACGAACAGTGGATGTTACAGAATCCTGAAAAATACGATTTCGATCTTGCATATGCAGCCAGCAAACGAGGCTGGATGGAAACTAATATTTTCTATGATTACATATTAAAAGTATTTATACCTAATTTGGGTGAAGACAGGCCCGTATTATTGCTGTATGATGGACATGTCAGTCATGTCGATGACAAAGTGGTGGCTTTAGCAGTAGAGAACAACATTACCATATTGAAGCTTCCTGCACATACATCACATCTATTGCAACCGCTAGACTTGGCTGTGTTCAAATCTTTCAAAACAATTTGGGATAAAAACCTCGTAAAATGGCAACGACAAAACGTTGGGCTCAAATTGAGAAAACAAAGTTTTGCTCAAATGTTTGCTGAAGCGTGGCAGGAAACCAAGCCACAAGTGATACAAAATGGCTTTAAAAAAGGTGGCATTTACCCTTTTAATCCTGAGATTATACCAAAGAACAAATATGATCCAGCAGCTTATGCGCGATGGCAAAAACACACGCAGCAATGCAAACACACTTCAATGACTTTTAAACAACCAAAAACTCTAACACAGatatgtgtagcagaaataaataaGATCATGTCCTATAACGGCTCTACTTCTAtctcaaataataattttgtttgctcTGAAATTTTGGACTCACCGACTTTAGAACATAGAGACAGCCAGCTAAAACCACTCGCCACTTTCGAACAAATGCTATTAGAAAAAGTTTCGCAACATCCTCAAAACGCTAAGAATAATATAGCTGTTAAGTTAAAACGAGTCGCGAAAGGTGCTGAAGTGATAACAAAATCTTTTGTAGAAAAGCAGCAAGCGATAGAATTaactaaagaaaaagaaatacagaagacaaaaaaacggaaacaaAAAACAGTACTGCAATCTAGAAGTTATGCAATTGACCCTATACCGGGACCATCTGGAACACaagataaaaaattaagaacagAAGCAACCGTAACGAATGTATCGATTTTGACTAACAAGAACAACACTGATGTGTATATTTCTAAAAAAGGCAAAGGAGTAGGAAAAAAATCTCGAACTGACAAAGAAAATGATTCGAAAGTGGACAATTATGATGAATACAGGAAGAAAAGTGAATTGCAAGTGAAACATGAATTGGATAATAAATCATGCCAAAAGACAACTATAAAGACAGCTATGAAAAAGCGTAAAAGATCTAATAGCAGTGTAACGACAATTGAAAGTATTCAGATGAGCGTCCATAGTGATTCTGACTTATTTGATTCTTTGAGCGACATTTTATCTGACTGTGATAAATTGACTGACTTTAATTATAATGAGGAAAACAAGACTGACTTAGAATTAGCATCTAGAGAACAACAAATTgaacaaataattaaagaaatgtATGACATGGATAAGAAAGAAAAGGAAGAAAGACAAGCAAGCCAAAGGGACGATATCTGCGAAGAGAGATGTGAGATAAAAGAAATTCCAGAAATTCAAACGAAAGAGACAAACGTTAAggcaaataatattaataaagtgaCTATCTTATCGTCTGTAAAAATCACACCAGAAAACCAAGCTTTCTATAAAATTTTACCTGAAAGTTTACAACTAAAACCAATTGATAAAAATTTAGATTTGTTTACAAACCAAAACCGAAAACTGTCACAAAGTACAAGCGTATCTAATAtaccaaagaaaaaaacaaagaaagttaaTTGCCCTACAAAGAAAACCACAATAGATAAAAAGGATTTCAGTGGAAACTTTTACATCAACATTGATAAAGATGATGACGGTAGAACGAAAAATTATATTGATGATTCGAAGACATACAATATTGGTGATACAGTTCTCGTTAGATATTTCAAACGAACTTGGATTTATTACATCGGTatcattgaaaataataatatcaattcaaacCCAAATATGTATAAGATAACATTCTATAGAACTATCGGCAAGAAAAACAACCTGAAATTTGTTATACCTAAGCGAAAAGACCAAGACTACGTGCCTGATTCTAATATAGTTAAAGTGATAGAACTACTACAGATAAATGAAGATCCTGTTGAGTTTACCCTTATGAATGACGATGATGAGAATTTCTTTAAATAG
- Protein Sequence
- MPRNYSRTSSRATSYTKEALQLAMQRINKKELTYAAASKIYGIPTSTLSDRILKKTAIVSNTLGRPTAIPVELESKLANCLRTLEKWGWGLSREEVLDVTQDFIKKTKIQTPFNDGRPGPDWFISFRKRHNLSIKKPQPVEYLRKKMTDPFVIHEYFTLLEKTLNELNISDPKQIWNLDETSVCLDPTKTKVVGARGEPCTRTTCGSAKENITVLTTVNAAGQKLDPLIVFKGKHMYEQWMLQNPEKYDFDLAYAASKRGWMETNIFYDYILKVFIPNLGEDRPVLLLYDGHVSHVDDKVVALAVENNITILKLPAHTSHLLQPLDLAVFKSFKTIWDKNLVKWQRQNVGLKLRKQSFAQMFAEAWQETKPQVIQNGFKKGGIYPFNPEIIPKNKYDPAAYARWQKHTQQCKHTSMTFKQPKTLTQICVAEINKIMSYNGSTSISNNNFVCSEILDSPTLEHRDSQLKPLATFEQMLLEKVSQHPQNAKNNIAVKLKRVAKGAEVITKSFVEKQQAIELTKEKEIQKTKKRKQKTVLQSRSYAIDPIPGPSGTQDKKLRTEATVTNVSILTNKNNTDVYISKKGKGVGKKSRTDKENDSKVDNYDEYRKKSELQVKHELDNKSCQKTTIKTAMKKRKRSNSSVTTIESIQMSVHSDSDLFDSLSDILSDCDKLTDFNYNEENKTDLELASREQQIEQIIKEMYDMDKKEKEERQASQRDDICEERCEIKEIPEIQTKETNVKANNINKVTILSSVKITPENQAFYKILPESLQLKPIDKNLDLFTNQNRKLSQSTSVSNIPKKKTKKVNCPTKKTTIDKKDFSGNFYINIDKDDDGRTKNYIDDSKTYNIGDTVLVRYFKRTWIYYIGIIENNNINSNPNMYKITFYRTIGKKNNLKFVIPKRKDQDYVPDSNIVKVIELLQINEDPVEFTLMNDDDENFFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01118234;
- 90% Identity
- -
- 80% Identity
- -