Eocc028561.1
Basic Information
- Insect
- Eurois occulta
- Gene Symbol
- retn
- Assembly
- GCA_950022335.1
- Location
- OX465498.1:6711308-6715945[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8e-20 3e-16 60.7 0.0 17 89 15 85 9 85 0.94 2 2 4.2 1.6e+04 -2.5 0.0 25 38 212 225 174 228 0.57
Sequence Information
- Coding Sequence
- ATGACATCCGAACCTACTAATCCTATGCTATCTTTTGTTGCAGGCACTCCAATCAACCGGCTACCAATAATGGCGAAGTCGGTGCTAGACTTGTACGAGCTGTACAACCTTGTGATAGCCCGCGGTGGGCTGGTGGAGGTCATCAACAAGAAGCTTTGGCAGGAGATCATCAAGGGGCTGCGGCTGCCGTCGTCCATCACGTCTGCTGCCTTTACGTTACGCACACAATACATGAAATACCTGTATGACTATGAATGTGAGAAGAAGAACCTATCAACCAGGAGTGAGCTGGACGCAGCTATTGAAGGCAACAAGCGTGAGGGTCGTCGCGCCTCGGGACAGTATGATGCACAAGCTGCTTTAGCTATGCCCCCACTAAATCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCGCTATCACTGTCGCTGGGGGGCGTGGCCCCGCGCCTGCCGCCACTGCCGCCGCACGCGCCTCACCTGGCGCAGCACGACATCGAGTACAGGGTGCGCGAGTACATGAAGATGATACAGCAACAGAGGGAGCTTATGCGAAATGGCTCCGAATCACCCCCCAGCAACGGCCAAGGGCCAATAATGTCACCTCGCGACGCCGCCCTCAGTGCCATCGATGTCTCCCGCCTCACCCTCTGGTCGCTctacaacaataacaacaacaacagcccACAACCAGAACTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGCTCACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCCCTCCGCCCGCCAAGCGCCGCACTCCGCGCCCCGTGTCCCGCCCCGCCTCTCCCCGCGACCACCTGCACTCGCCGCCACAGCACCGCCACAGCCGCAGGGACACCACAACACCGCCACAGATCAACGGCATGCCCAATACTAATGGTGTCAATGGAGCTGCCTTCAAGATTACCACCAGAGGAGACGCAAGCACAGGAGACCAGCAACTAGTAGTGTCGATAGAGCTGAACGGAGTGACGTATGAAGGCGTACTCTTCCCCTCAGGCAACGGTCAGAATGGACATAGACAAATGGTGtcctaa
- Protein Sequence
- MTSEPTNPMLSFVAGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGQGPIMSPRDAALSAIDVSRLTLWSLYNNNNNNSPQPELEPQREALNLSESPNSLTSGGKREACRSPPPPAKRRTPRPVSRPASPRDHLHSPPQHRHSRRDTTTPPQINGMPNTNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -