Basic Information

Insect: Eurema mandarina
Gene Symbol: -
Assembly: GCA_018238005.1
Location: DWAJ01001527.1:11181-17591[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.00024 0.021 15.9 1.4 1 23 198 220 198 220 0.98

2 31 0.00059 0.051 14.6 0.2 2 20 260 278 259 280 0.94

3 31 2.9e-05 0.0026 18.7 0.5 3 23 308 329 306 329 0.96

4 31 6.8 6e+02 1.8 0.8 2 19 350 367 349 370 0.78

5 31 0.025 2.2 9.5 0.7 1 23 380 402 380 402 0.98

6 31 0.0065 0.57 11.4 0.2 3 23 423 443 422 443 0.94

7 31 1.3e-05 0.0011 19.9 0.6 1 23 482 504 482 504 0.97

8 31 0.0019 0.17 13.0 2.8 2 23 550 572 550 573 0.96

9 31 0.0046 0.4 11.8 0.7 1 23 622 645 622 645 0.96

10 31 0.00079 0.069 14.2 0.3 1 23 698 720 698 720 0.98

11 31 0.011 1 10.6 6.2 2 23 732 753 731 753 0.96

12 31 0.0087 0.76 11.0 1.3 2 23 765 786 764 786 0.97

13 31 0.012 1 10.5 0.4 1 23 796 818 796 818 0.98

14 31 4.1e-05 0.0036 18.3 4.1 1 23 847 869 847 869 0.95

15 31 0.00025 0.022 15.8 1.3 1 23 880 902 880 902 0.99

16 31 0.00051 0.045 14.8 1.2 1 23 910 932 910 932 0.97

17 31 0.00026 0.023 15.7 0.3 2 23 952 974 951 974 0.97

18 31 0.79 70 4.8 0.5 1 23 992 1014 992 1014 0.91

19 31 2 1.7e+02 3.5 4.9 1 23 1021 1043 1021 1043 0.96

20 31 0.00057 0.05 14.7 2.6 2 23 1054 1076 1053 1076 0.95

21 31 0.00033 0.029 15.4 0.5 1 23 1098 1120 1098 1120 0.97

22 31 0.33 29 6.0 0.6 2 20 1124 1142 1123 1144 0.92

23 31 3.2 2.8e+02 2.9 5.6 2 23 1163 1185 1162 1185 0.95

24 31 0.0054 0.47 11.6 1.0 2 23 1201 1222 1200 1222 0.95

25 31 0.23 20 6.5 5.3 3 23 1230 1250 1228 1250 0.96

26 31 0.003 0.26 12.4 1.0 2 23 1261 1283 1260 1283 0.95

27 31 0.028 2.5 9.3 1.1 2 23 1300 1318 1300 1318 0.95

28 31 0.38 33 5.8 2.7 2 21 1322 1341 1322 1342 0.94

29 31 1.8 1.6e+02 3.7 0.4 2 23 1390 1411 1389 1411 0.93

30 31 0.012 1 10.5 0.7 2 23 1422 1444 1421 1444 0.95

31 31 0.29 25 6.2 4.9 2 21 1482 1501 1481 1502 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.00024	0.021	15.9	1.4	1	23	198	220	198	220	0.98
2	31	0.00059	0.051	14.6	0.2	2	20	260	278	259	280	0.94
3	31	2.9e-05	0.0026	18.7	0.5	3	23	308	329	306	329	0.96
4	31	6.8	6e+02	1.8	0.8	2	19	350	367	349	370	0.78
5	31	0.025	2.2	9.5	0.7	1	23	380	402	380	402	0.98
6	31	0.0065	0.57	11.4	0.2	3	23	423	443	422	443	0.94
7	31	1.3e-05	0.0011	19.9	0.6	1	23	482	504	482	504	0.97
8	31	0.0019	0.17	13.0	2.8	2	23	550	572	550	573	0.96
9	31	0.0046	0.4	11.8	0.7	1	23	622	645	622	645	0.96
10	31	0.00079	0.069	14.2	0.3	1	23	698	720	698	720	0.98
11	31	0.011	1	10.6	6.2	2	23	732	753	731	753	0.96
12	31	0.0087	0.76	11.0	1.3	2	23	765	786	764	786	0.97
13	31	0.012	1	10.5	0.4	1	23	796	818	796	818	0.98
14	31	4.1e-05	0.0036	18.3	4.1	1	23	847	869	847	869	0.95
15	31	0.00025	0.022	15.8	1.3	1	23	880	902	880	902	0.99
16	31	0.00051	0.045	14.8	1.2	1	23	910	932	910	932	0.97
17	31	0.00026	0.023	15.7	0.3	2	23	952	974	951	974	0.97
18	31	0.79	70	4.8	0.5	1	23	992	1014	992	1014	0.91
19	31	2	1.7e+02	3.5	4.9	1	23	1021	1043	1021	1043	0.96
20	31	0.00057	0.05	14.7	2.6	2	23	1054	1076	1053	1076	0.95
21	31	0.00033	0.029	15.4	0.5	1	23	1098	1120	1098	1120	0.97
22	31	0.33	29	6.0	0.6	2	20	1124	1142	1123	1144	0.92
23	31	3.2	2.8e+02	2.9	5.6	2	23	1163	1185	1162	1185	0.95
24	31	0.0054	0.47	11.6	1.0	2	23	1201	1222	1200	1222	0.95
25	31	0.23	20	6.5	5.3	3	23	1230	1250	1228	1250	0.96
26	31	0.003	0.26	12.4	1.0	2	23	1261	1283	1260	1283	0.95
27	31	0.028	2.5	9.3	1.1	2	23	1300	1318	1300	1318	0.95
28	31	0.38	33	5.8	2.7	2	21	1322	1341	1322	1342	0.94
29	31	1.8	1.6e+02	3.7	0.4	2	23	1390	1411	1389	1411	0.93
30	31	0.012	1	10.5	0.7	2	23	1422	1444	1421	1444	0.95
31	31	0.29	25	6.2	4.9	2	21	1482	1501	1481	1502	0.94

Sequence Information

Coding Sequence: ATGGCACTCAAGCTGGGAAAATGCAGACTCTGTCTCAAGCTCGGGGACTTCTATTCCATCTTCACGGTGGACAACAATCTGCAACTCGCGGAGATGGTTATGGAATGCGCGCGAGTCAAAATACAAGAAGGTGACGGACTGCCTGATAAAATTTGCAGTGAatgtattcaaaaattaaGTAGTTCCCATATCTTTAAACAACAATGCGAAAGGTCGGATCAAGAGCTGCGCCGTAATTATGTGCCACCGCCAGGTTTTAGTGCTCCAACGCCACCGCCACCTACTCGCCAAAGCAGCGACTCTGCTTTTTCAACTGATACATCAAAACCTGCATCATCTTTTGAAAGTAAAGTAACTCCAACCAATAGAGTGCGCAAAAGAAGTACGGAGAGCATCGATAATGTATCAAATAGTAGTCTGTCACACGAATACACTACACCTGGCACTTCTAAACGGGTTGAAGAACTGCGAAAAACTCAAAGGAAACGAAAAATGCCTGTAGACAACTCTGATTCCGATTTTGACGACAACAGTTCTTTCCAGCCCAGCCCGTTTTTAGATGGTGGAACAGATTCTGATGAACCTGTTGAATTTAAATGCGATATTTGTTCAAAAGCTTTCAAGAGTTACATCAGTATGAATGCTCACAAAAAAAGTCACAGTAAACAGAAAAAGGCTCTGGCTAGAAAACTTGCAGAACAACAATCGAGCTCACCAGGTACTCCGTTCCAGCCAGAAATCAAATTGGCAGATGCTCACGATGTTGAAGACAATTTGAAATGTGGAAAATGCggcaaaacatttaaattgaatataatgcTGAAGAGGCATGTTGATTTGTGCGGAAAAATCGAAATCGATAAACAGCTTAAAATAGCGTTAGAGCCTATTGATGGTTTgacaaatcaaaataaaatagattgtaCAATGTGCAGCACAAAGTTTAAAACGATTGAGAATTTGGAAAAACATATGAGAGTAGTTCATGCCGCTGTTCTCAAAAGAGAAAGTCCTGCCTTACAATCGGAGAATGGCAAAATAGTTGTTCCATGTTTCTATTGTCGTAAACCTTTTTACGATTTCTATTCACATTCCGCTCATTTTAGAGTTTGTCCCAAACGAGATGATGCCCTTACATTTGTGTGCACCGTATGCAATAAGGCGTTGATGAAAAAGGCCAGTTACTTTTTGCACGTGAAATCCCATTTTTTTCCAGTAACaactactaatataaaacaagatGAGACAACCTCTAACGAAAACATATGTCGCTTTTGTTCTCTTCGATTTACAACCCAGGAGGAGCTCATAAATCATTTGGCAGCCCATATAAGTAATGCGGAGGATGGAATCGATGGCGGTGATGAAGAATCTCGGGCAAGTACGTTAGATGATTCAGCATCTGTACATTCCGAATACAATTCTTCAATCTCATCGGGCCCATATAAATGTTCAATTTGTGGTAaaggatttaaatataaaaaagctttagCAACCCACGAGGCAAAACATGACCAAGATACAAATTCAAGCATAAAAATGGAACCACCAGACGGAGAAACGTCCGATCTATTGAGTGAAACCATACAAGAGGACAACTTGAACCAGTCCGATTTTGAATCCAGTCACGGCGAAGAAGAAGACAACACATGTGACATTTGTGAACgtcaattttcatacaaacgcTTGTTAATTCAGCACAAGAGGATTAAACACCACATGACCTCGGGGACAAAAAGGGCGAAGATAAATTTGAAAGACTGCACGGTTCGCTGTCTCATATGTGACATTGAGATGAAAGTGAGCATGATAAACGAGCACAATCAGAAGCACATCACGGCGAACATGAAGCCGCGGAACCTGTACACGTGTATCGAGTGCGAGCAGCAGTTCAAGAGCTGCAGCGCGCTCGCCAACCACATCAAGATAGTTCACCGGCTGCAGATGAAGCAACAAGCGCCCAAGGTGACGATTCCCGCGGACTTGGCGGATTTTTGTGAAGTCGTTGTGACCAAAGCGGAGCCCCTGGACTTTGTCCAGAGTCACAGCGACTTTGGAGAGGCTTCCGCCGGCGACGGGACTTTCAACGCGTTCACTTGCCCCACTTGCAGCAAAGTTATGCCGACACTAATTTCGTTAAAGAGGCATATGAATTGGCATACAAATGTCGGTAACAATATGGAGAAGAAACTAGAATGTTTCGTTTGCAATGAGACGTTTAGATTTAACTGCCACTACAAGTTGCACATGCGCCAACACTACCACGATACCAATCTCGATCCCAAGCACCTGACGTGTCCCATTTGTAACCGGAAAAGCAAACATCTCCGAGCCGCACAGGCGCACATGAAGTATCATCAGCAAACACGGTTCCAAAACAAAGACTACGAATGTGCGATTTGTAAAAGAGTCTTTCAGTATAGAAAAGTTTACCTCTCGCATATGGCCATTCACTTTAAGCGCGGAGAATCTGCAAATAATACTGTTATAGGTTCAGCTATACCGACCACTGCCGATAAAACTTTATTCGACGGAACACACACTTGTAAAATTTGCGGAAAAGTTTGTGACTCTGAATCGAATTTGAAGCACCACATGGGCTGGCACAATTCTAAAACTCTTTTGTACGGCGCCCGATACGAGTGTGAGATATGCAATCTTCAGTTCACAAACAAGAAACGTCTGGAACTGCACAATCGCACTCATTACGAGGACGAAAATGGACCTTTCAAATGCCACATCTGTGGAAAGGGTTACATTGCAGAGGAATATTTCAAAAGACATGTTAAAGGCCATAACTTCGATCATCAATCTCATAAAAAACGCATCGAGAGGCTCAGAAAGAATAAAGTGAAATGTCCGATTTGTACAAAGTATTACCCTGACTTGGTGAAGCTCATTCGGCATTTGCGTAAGACACATCCCGAAAGCAAAATGATTAAGCAAGATCCGGATGCTCCTGCGCCCAAGTACTACCCGTGCAAGCTGTGTGCCAAAGTGTTCCTAGACGAGCGAAGGTTGCAGCACCACGAAGAAGCTCACCTGCGCAAGCCGGAgttgtataaatgtaaattctGCAAGAAAACCTCCATGTCTTTGAAGAACCACCGAATTCATATCAAAGGTCATTTGACACAAAAGTACATCGATACGCCACTGAAATGCGAACATTGCGATGAAACCTTCACCCGCGGATACGATCTGCATTACCATTTGCGAGACGTTCATAAAATAGAGGAGACGTGGATTGCGGATCGAAATAAACAAGATTTCGATGGACCACTCAAAGAGTTCCAATGCTCGGTCTGCTACAAAGTTTTAGCTTCGAAAGGCAACTTTGAGAGACACATAGACTACCACAATTCACTCCGGTGCAACTATTGTTTCGAATACTTCAGCACGCTGCGATTCCTAGAAGGTCATTTGTCTTTCAGTTGCGAAAAGAGGCAACTACTCGGTAATACCGAAGTCTATCCGAAACGTGTGAAGTGCCATATTTGTTATAAGGCGTTCCATGTGCAAGTGAAGTTGGACTGCCATCTGCGGACTCAGCACGGAATAAAATCATTCAAAGAAGCTTCAGAAAGTAAGAAGGAAATAGTGTGCGATTATTGTTTCCGAGTATTCGAAAATGAGTTTCACTTGGCATCCCACAAGCTCTACCACCGAACGCTGGGCTATTATGGATGTTTGTAttgtaatagaaaatttaacaCCATGACTACATatagaaaacataaaaatcatcATTTCGCCCAACTGAATGTCGATAATCCGACCAAGTGCGAACACTGTGATGAAACCTTCGTGCCGTTTCGAGAGTTCATTTACCACATGCGAGACGTACACGGAGACGACAAGGAGTGGGTCGTCCTGCCGAAGGAGATCATTGAAGAAAAGTGCAATATCTGTAACAAAATCTTCTACAACCTCCAGCGACACCTCGCTTACCACGAAGAGAACAGATGCAAAAAATGTGGGGAGTACTTCTTTTCACGAGCCGATTACGATAACCATATTTGTCACATCGACAGTGATGATGAGGTCACGGAGAACTCGCAAAACGATATTCGACCGAAATATGAAGAGTGTCGATTTTGTTTCAAACCGGTTACCTACAAGACTAAGAAAATGCACGAACTTCTGCATAAAGGATCCGGCTCTATTTCGTGTCGCTTTTGTGTTCTTAAGTTCAAGACGATCGATGCTTTTAATATACACGCGTTTTCACATCGCAGCAGCAAATACAAGAAACGGCCACTTCGGTGTCGAATATGCCGCGAGACGTTCATTAAATACGGGCCGTTCATGCGCCACATGAAAAACGTTCATAAATCCATTAAGAAAATGCACTATCGGGCGACGATAAAACCCGAGCAATGCGTCGTTTGTAAAGAAGACTTTCCGAATCTCCACAATCATTACAGAGCCCACCTGCAGAATCAATGTCTACAGTgtcacaaatattttacttcttCGAAATTGTTTTCGCAACACCAGTGCGATAAAGAAGACGGTGAAGAATCGAAAGTATTCACGTGCGACGCGAACCTTCCCGCCCTTATCAACTCTTACGTGCCCGTTGACGAGAAGGATGATGAAAAGTTTTACGGATACGAGAACGATGACGAAGGTGAAGAAAACGGTGATGTAAATGCCAACAGTGAACTTCCTCAGAATGAGGATAGTCAGAATTCAGTGGACACGGCGGAGAGTACTATACATGAGATGGCTCACGCGCCCATCATATCCGATGTTCTTTCGCTGTATCAAAGCAAGGTAGCTGAAGATGTCGAAAGCAAACAGGGTAGTGTGGTCGAACTGACTGATGACGATTCAGTGGGCTTTGAAATTAACGGAGCTGTCATTACAATAGATGatgattaa
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNNLQLAEMVMECARVKIQEGDGLPDKICSECIQKLSSSHIFKQQCERSDQELRRNYVPPPGFSAPTPPPPTRQSSDSAFSTDTSKPASSFESKVTPTNRVRKRSTESIDNVSNSSLSHEYTTPGTSKRVEELRKTQRKRKMPVDNSDSDFDDNSSFQPSPFLDGGTDSDEPVEFKCDICSKAFKSYISMNAHKKSHSKQKKALARKLAEQQSSSPGTPFQPEIKLADAHDVEDNLKCGKCGKTFKLNIMLKRHVDLCGKIEIDKQLKIALEPIDGLTNQNKIDCTMCSTKFKTIENLEKHMRVVHAAVLKRESPALQSENGKIVVPCFYCRKPFYDFYSHSAHFRVCPKRDDALTFVCTVCNKALMKKASYFLHVKSHFFPVTTTNIKQDETTSNENICRFCSLRFTTQEELINHLAAHISNAEDGIDGGDEESRASTLDDSASVHSEYNSSISSGPYKCSICGKGFKYKKALATHEAKHDQDTNSSIKMEPPDGETSDLLSETIQEDNLNQSDFESSHGEEEDNTCDICERQFSYKRLLIQHKRIKHHMTSGTKRAKINLKDCTVRCLICDIEMKVSMINEHNQKHITANMKPRNLYTCIECEQQFKSCSALANHIKIVHRLQMKQQAPKVTIPADLADFCEVVVTKAEPLDFVQSHSDFGEASAGDGTFNAFTCPTCSKVMPTLISLKRHMNWHTNVGNNMEKKLECFVCNETFRFNCHYKLHMRQHYHDTNLDPKHLTCPICNRKSKHLRAAQAHMKYHQQTRFQNKDYECAICKRVFQYRKVYLSHMAIHFKRGESANNTVIGSAIPTTADKTLFDGTHTCKICGKVCDSESNLKHHMGWHNSKTLLYGARYECEICNLQFTNKKRLELHNRTHYEDENGPFKCHICGKGYIAEEYFKRHVKGHNFDHQSHKKRIERLRKNKVKCPICTKYYPDLVKLIRHLRKTHPESKMIKQDPDAPAPKYYPCKLCAKVFLDERRLQHHEEAHLRKPELYKCKFCKKTSMSLKNHRIHIKGHLTQKYIDTPLKCEHCDETFTRGYDLHYHLRDVHKIEETWIADRNKQDFDGPLKEFQCSVCYKVLASKGNFERHIDYHNSLRCNYCFEYFSTLRFLEGHLSFSCEKRQLLGNTEVYPKRVKCHICYKAFHVQVKLDCHLRTQHGIKSFKEASESKKEIVCDYCFRVFENEFHLASHKLYHRTLGYYGCLYCNRKFNTMTTYRKHKNHHFAQLNVDNPTKCEHCDETFVPFREFIYHMRDVHGDDKEWVVLPKEIIEEKCNICNKIFYNLQRHLAYHEENRCKKCGEYFFSRADYDNHICHIDSDDEVTENSQNDIRPKYEECRFCFKPVTYKTKKMHELLHKGSGSISCRFCVLKFKTIDAFNIHAFSHRSSKYKKRPLRCRICRETFIKYGPFMRHMKNVHKSIKKMHYRATIKPEQCVVCKEDFPNLHNHYRAHLQNQCLQCHKYFTSSKLFSQHQCDKEDGEESKVFTCDANLPALINSYVPVDEKDDEKFYGYENDDEGEENGDVNANSELPQNEDSQNSVDTAESTIHEMAHAPIISDVLSLYQSKVAEDVESKQGSVVELTDDDSVGFEINGAVITIDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01193761;
90% Identity: iTF_00710403;
80% Identity: -