Ehec022313.1
Basic Information
- Insect
- Eurema hecabe
- Gene Symbol
- -
- Assembly
- GCA_026213755.1
- Location
- JADANM010005075.1:371488-378109[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.9e-10 2.1e-07 31.0 0.0 4 41 160 198 157 201 0.90 2 4 1.9e-11 1.4e-08 34.7 0.1 4 39 214 249 211 252 0.91 3 4 2.2e-16 1.6e-13 50.6 0.1 2 45 267 311 266 311 0.97 4 4 1e-17 7.5e-15 54.8 0.0 1 43 318 361 318 363 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGACCGTCCTTAGTAAAGTGTGAGCCGCCTTCTGACGAAGAAGATAACTCGCAGTTTGGAAAATATAATACAGAACTTCTGCCAATTAAATTAGACCCGGAGTCACAATACGAAGACAATGTTTCAGCACATTTACTGGATCAATTATCATTTTCTTCAGAGCTGGTACCGGTACCAGCCGCTCCAGCTGCTACACCAGTTCCCGAAGACTTGCCAGCTCCCCATGAGACCTCCTTGGCTATGTTACAACCCGCTAAGAATACTACCCTGGGTTCAGCGTTAATAGACAAGCACTTATCAATGATAAGATCAAATGAAATTTTGGATTCATCAGACTTTGCTCCATTGCTAAACATTAAAGACGAACCTCTCTCGGAAGGCGAAAGTCAACAGCTAAGCAGTGACGAAGCAAGCGAAAACTTTCCCGAGAGCAGTCGTGGCGCACCGAAGACCTGGTCACAAAAGGACATGGAAAAAGCTCTCGATGCCCTCAAGAATCATAATATGAGTCTTACCAAGGCATCGGCAACCTACGGCATTCCATCAACCACATTATGGCAAAGGGCTCACAGACTGGGCATCGAAACCCCGAAGAAGGAGGGTTCCGCCAAGACTTGGAGCGAGCGCGACCTCAAGGGGGCCCTGCACGCGCTCAGGACTGGCGCCATCTCCGCCAACAAAGCCAGCAAAGCTTATGGTATCCCGAGCAGCACGCTGTATAAGATAGCGCGTCGCGAGGGCATCCGGCTGGCGGCGCCCTTCAACGCCGCGCCCACAGCCTGGCGCCCCGCCGACCTAGCGCGCGCGCTCGCCGCCATCCGCTGCGGCGCCGCCTCCGTGCAGCGCGCCGCCTCGCGCTACGGCATCCCCACGGGTACGTTATATGGACGGTGCAAAAGAGAAGGCATCGAGTTATCCCGCTCTAATCCCACGCCTTGGTCGGAAGATGCTATGGGAGAGGCACTTGAAGCTGTCAGGATTGGCCAGATGTCCATCAACCAAGCTGCGATCCACTACAATCTGCCGTACTCTTCATTATATGGTCGCTTCAAGAGATGCAAATATCAAGTCGTTCAGGACCATCAACAAACACAATATCAAGACAGGCCAGAGAGCCAAGAACAAACTCAGAACGCAGAATTCCCTCACCACGTGCCTTTGCGAAGCTACGACACGGATTTGCAATACATGAGCGAAGTTTCTTCCATGCAAAGTTTACAAGAGCATTACAGCCAAGCAATGTATTACGCGCAGTGTAATGTTTCCAGCTGA
- Protein Sequence
- MPGYGPSLVKCEPPSDEEDNSQFGKYNTELLPIKLDPESQYEDNVSAHLLDQLSFSSELVPVPAAPAATPVPEDLPAPHETSLAMLQPAKNTTLGSALIDKHLSMIRSNEILDSSDFAPLLNIKDEPLSEGESQQLSSDEASENFPESSRGAPKTWSQKDMEKALDALKNHNMSLTKASATYGIPSTTLWQRAHRLGIETPKKEGSAKTWSERDLKGALHALRTGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTAWRPADLARALAAIRCGAASVQRAASRYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKYQVVQDHQQTQYQDRPESQEQTQNAEFPHHVPLRSYDTDLQYMSEVSSMQSLQEHYSQAMYYAQCNVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01193525;
- 90% Identity
- -
- 80% Identity
- -