Esim002230.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- -
- Assembly
- GCA_905147225.1
- Location
- LR990103.1:27205459-27210302[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 24 0.11 11 7.7 3.1 2 23 20 42 19 42 0.93 2 24 0.0001 0.011 17.1 0.4 1 23 47 70 47 70 0.96 3 24 0.0061 0.61 11.6 1.2 1 23 75 98 75 98 0.95 4 24 0.00066 0.066 14.6 1.4 2 23 101 123 101 123 0.97 5 24 0.003 0.3 12.6 0.8 2 21 131 150 130 151 0.94 6 24 0.0043 0.43 12.0 2.3 1 23 203 226 203 226 0.97 7 24 7.8 7.8e+02 1.8 0.0 3 23 255 276 255 276 0.94 8 24 9.9 9.9e+02 1.5 0.1 2 23 299 322 298 322 0.81 9 24 2.2e-05 0.0022 19.3 0.2 3 23 329 350 328 350 0.94 10 24 0.0044 0.44 12.0 2.9 2 23 355 377 354 377 0.94 11 24 0.0006 0.06 14.7 4.4 1 23 382 405 382 405 0.94 12 24 2.7e-05 0.0027 19.0 5.4 1 23 409 432 409 432 0.97 13 24 0.00015 0.015 16.7 0.7 2 23 439 460 438 460 0.96 14 24 1.4 1.4e+02 4.2 0.3 1 12 466 477 466 480 0.88 15 24 0.0034 0.34 12.4 1.2 1 23 517 540 517 540 0.96 16 24 0.032 3.2 9.3 0.1 3 23 572 593 570 593 0.95 17 24 0.026 2.6 9.6 2.2 2 23 616 637 616 638 0.95 18 24 0.00067 0.067 14.6 1.7 1 23 643 666 643 666 0.97 19 24 0.0066 0.66 11.5 0.4 1 23 671 694 671 694 0.93 20 24 0.041 4.1 9.0 0.5 2 19 700 717 699 722 0.77 21 24 0.0002 0.02 16.3 0.1 2 23 730 752 729 752 0.97 22 24 0.14 14 7.3 0.0 2 23 759 780 758 780 0.95 23 24 1.2e-06 0.00012 23.2 0.6 1 23 786 808 786 808 0.94 24 24 5.4e-06 0.00054 21.2 2.9 1 23 812 835 812 835 0.97
Sequence Information
- Coding Sequence
- ATGAATTACAACAAAAACATTGATATTCCTTTTCAAGAATATAGACTGGTTGATTGTAGTTGCTTGCATTGCAACGAGAAATTTGCTTACTTCGGCTACTTGGTGACTCATGTGAACAACATGCATCCACAAAATTGTTTCATTTGCAATGAATGCGGGGGACGTTTTAATAAGAAGAGGGATTTAGCTATACACATAAGGAATTACCACCGCGAAGGTGGATATCCCTGTGATTCGTGTCTTCAGACTTTTGATACACTTCAGTCTTTAAGgagacataaaaataatactcactTTAGACAGTGCAGAAGTTGTAATTTGAGATTTGCATCACTATCTCTTTTACAAAAACATCTGCAAACAACACATCCTCATCATGAAGGCAAAATTAAATGCACGTACTGCTCCAAAGAGTTCCATTCGTCGATTGGTCTTCGACAGCATATCAGTAAAtgtcaaattaaaattacatcaCACGTCGAAACCGAACCGTTTCTCGATGGCAACGTAGAGCCTAGAAAGAAACAGAATATACAACAAATTCGTCAAAATATACAATGCGTTCTGAACATGTCGACGGCTGTTCCATTTAAATTTTTCTCAAAGTACTCCTGCTTTTATTGTTCAAAGAAATTCTTTGAATTTGAAGATCTCCGACAGCATACGAATGTTGAGCATCCAATTTGTGACCTGAAACAAAAATGCATGCAGAAATGTAAAGGAGAAAGGATCACTGTTAAAATAGATATATCTGCATTAGGCTGCAAGCTCTGTTCAGTGCCTATGCGAGATTTGGAAACACTAATCGATCATTTAATCGTTGAACACAAAGCCAATTACGACAAATCGATTACGGGTTGTCTGGAACCTTTCAAAGTCATCAAAGACAATATGCCATGTCCCATATGTCCCGATAAATACTTTAGATATTTTGGCATCTTGTTGCGACACGTGAACGCTGAACACAGTAACAATAACAGGATTTGTGACTTCTGTGGTCGAAGTTTCCGGAATGCTGTCAATTTGAATGTTCACATTACTTACTCTCACACGGGATCGTGTGAGTGCGACGTGTGCGGTGTCAAATATAAGAACCAGTGGTGTTTAGCCAGACACAGAGCTAAAACTCATAATGCGAAGGATCACAAGTGTTCCAAATGTCCAGAGAGCTTCACGTCACAGTATCATAAGCAGAAGCATCTGATTGAAATCCACAATATCGGTCATAAATGCAACTATTGTGATAAGATGTTCACCAGGAACAGTTTTATGAAAGATCACGTGAGACGAACGCATTTAAAAGAGAAAAATGTCACGTGTTCCATTTGCAATGAGAAGTTCTTTGATAATTATCTATTAAAGATGCACATGGTGAAGCACGAGGGTTACAGGAAGTTCTCTTGCACTGTTTGTGGTGCAAAATTCGATACAGTGGAAGACAAATATAAGAAAATGGAGTTAGCTAGAAAGCTTTTGATAAAACGACGGAATGTCGAATACGTTTTGCAATATAGTAACGTGACCCCGTTCATGTGGGACAAGGGCAAGTACAAGTGCTTCTATTGCAACGAAACTACTAAAGACCCGGCCGTATTGAGACACCACAGTGCGACCGTACATCAGTTTGCAAATCTAGAACTCGTCGTGTTCGATAGAACTAAAAATAACAGGAACAAAGATGCGGCTGTCAAAATAGACGTGACAGATATCGCTTGCAAACTTTGCACGCAGTCCGTTACCAACATAGAGGAGTTAATACATCATCTGATCATAGCCCACGATGCAGAGTATGATATCAGCGTGCCAAACTGTTTATTGCCCTTCAAATTGGACAAGGAACAACCGACCTGCCCCACCTGTAACATGAAATTTGGTTTCTTTGAATACTTGCTAAGGCATGCGAACAAACACCACCTGTCCCATCATTATATTTGCGACGTGTGCGGCACCAGCTTCCAAGGTGAAAACCATCTGAAAATGCACTACAGATATTATCATAGAGAAGGTGGTTACAATTGTGATTATTGTGATATATCTTTCGCTACCTTATCGAAGAAGATTCTTCATGAGAAAAATGTCCATCTGGTGAACCTTTCTACCTGTCCGCATTGTCCGGAGACATTCAAAAGTCCGTATATAAAGAAGTTGCATTTGGCAAACGTTCACGGTGTGGaggagttaaaaataaaatgtcccTACTGTCCCAAAGTTTATCCGCAAGAGTCTATAATGTCGAGACACATGAGGAGGGTGCATTTGAGAGAGAAAAATGTGGAGTGCGAGGTCTGCGGTGATAAATTTTTCGGACCCTACGATGTAAAGCTACACATGgtgaaacataacggcgataagAAATATGTATGTTCCGTGTGCGGGAAGAAGTTTTCCAAACGCAGCAACTTGAATAGTCACGTCGTGTTGCATATAAAGGATTACGTTTGCgagttttgtaataaaaagttTGCACATCAGACCAATTTGAGAACGCACATTAAGAATATACACGAAAACCTATTAATTGATGATATATATGAGAGTGATTTAGTTAAAATTGACGTTGTTTGA
- Protein Sequence
- MNYNKNIDIPFQEYRLVDCSCLHCNEKFAYFGYLVTHVNNMHPQNCFICNECGGRFNKKRDLAIHIRNYHREGGYPCDSCLQTFDTLQSLRRHKNNTHFRQCRSCNLRFASLSLLQKHLQTTHPHHEGKIKCTYCSKEFHSSIGLRQHISKCQIKITSHVETEPFLDGNVEPRKKQNIQQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFFEFEDLRQHTNVEHPICDLKQKCMQKCKGERITVKIDISALGCKLCSVPMRDLETLIDHLIVEHKANYDKSITGCLEPFKVIKDNMPCPICPDKYFRYFGILLRHVNAEHSNNNRICDFCGRSFRNAVNLNVHITYSHTGSCECDVCGVKYKNQWCLARHRAKTHNAKDHKCSKCPESFTSQYHKQKHLIEIHNIGHKCNYCDKMFTRNSFMKDHVRRTHLKEKNVTCSICNEKFFDNYLLKMHMVKHEGYRKFSCTVCGAKFDTVEDKYKKMELARKLLIKRRNVEYVLQYSNVTPFMWDKGKYKCFYCNETTKDPAVLRHHSATVHQFANLELVVFDRTKNNRNKDAAVKIDVTDIACKLCTQSVTNIEELIHHLIIAHDAEYDISVPNCLLPFKLDKEQPTCPTCNMKFGFFEYLLRHANKHHLSHHYICDVCGTSFQGENHLKMHYRYYHREGGYNCDYCDISFATLSKKILHEKNVHLVNLSTCPHCPETFKSPYIKKLHLANVHGVEELKIKCPYCPKVYPQESIMSRHMRRVHLREKNVECEVCGDKFFGPYDVKLHMVKHNGDKKYVCSVCGKKFSKRSNLNSHVVLHIKDYVCEFCNKKFAHQTNLRTHIKNIHENLLIDDIYESDLVKIDVV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00157408;
- 90% Identity
- -
- 80% Identity
- -