Esim001590.1
Basic Information
- Insect
- Euproctis similis
- Gene Symbol
- clz9
- Assembly
- GCA_905147225.1
- Location
- LR990103.1:20933798-20935072[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-10 3.6e-07 30.7 0.0 3 36 13 46 11 50 0.94
Sequence Information
- Coding Sequence
- ATGGAGCCACAAAAGCGGCGAAAAGTGTACAGTAAAACACAACTAGCCGAAGCAATCAAAGCAATTAATGACGGAACAAGTGTATATGAGGCATCAAAAAGGTTTAATATTCCTAAAACTACATTACGAGACAAACGGGACGGGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTTAATTTAAGTGAAGAAAAACAGACTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTAGAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACTTAAATCGTCCAAACCCTTTTAAAAATGGTGTGCCTGGCAGATATTGgtttgagaattttataaatagacatcCAACAGTATCTAAACGCGTTGCACAAAATCTTCCTTCAAGCCGAAATCAAGTCACAGAAGCAGCTATACGTGCATGGTTCGATAGagtgaacaattattttatgacaaataatcTGCATGATGTTTTAGAAGATCCTAGACGAGTGTTTAACTGTGACGAAACTGCTTTCTTTTTATGCCCAAAAGAGAAAGAAGTTTTGGTTAGCAGAGGTAGCAAACGAGTGTATAATCGTGTTGCTAATGACGAAAAAGAGTGCTTGACTGTGCTTGTGAATGTTTCAGCTGACGGAAATCTAGCACCTCCAATGATACTTTTTCCGTATAAACGTATGCCAAAAAATCTTGTACCTACAATACCTCGTGGATGGGGACTTGGTAACACGGAGTCGGGTTGGATGAACACAGAagcattttatgaatatattaccAACTGCTTCTATCCGTGGCTTGTAACAAATGAAATACCATTTCCAGTAGTTTTGTTTTTGGATGGTCACACAGCTCACATATCACTTCCACTATCAACATTCTGTAAAGAAAAAGCAATCATCCTGGTAGCTTTACTTCCCAACTCTACACATATACTTCAGCCGCTTGACGTAGCTGTTTTCAGACCAGTCAAAGGAACATGGAGGACTGTTGTGCATAAATTCAGAATTCAAAATAACTATGCCAAGCTTAAACGCACTGATTTTGCTCCGgcagtaaaaaaatgttttgaccaaTGCCTTAAGCCTGAAACCATACAGAGCGGATTTCTTTGTTGTGGATTATATCCATTTgatgcatcaaaaataaactactgtaaactgttgccaaatttaaagcatACAGAAGACAATCATATATCCACATCTGAACATGCAGAAAAATTTAAGCATGATTTCGAGGCTAGATTGTCaccttaa
- Protein Sequence
- MEPQKRRKVYSKTQLAEAIKAINDGTSVYEASKRFNIPKTTLRDKRDGKYKNEICGVQPVLNLSEEKQTVDWIHYLGKMGFPVRKEQLLEAVAKLVQNLNRPNPFKNGVPGRYWFENFINRHPTVSKRVAQNLPSSRNQVTEAAIRAWFDRVNNYFMTNNLHDVLEDPRRVFNCDETAFFLCPKEKEVLVSRGSKRVYNRVANDEKECLTVLVNVSADGNLAPPMILFPYKRMPKNLVPTIPRGWGLGNTESGWMNTEAFYEYITNCFYPWLVTNEIPFPVVLFLDGHTAHISLPLSTFCKEKAIILVALLPNSTHILQPLDVAVFRPVKGTWRTVVHKFRIQNNYAKLKRTDFAPAVKKCFDQCLKPETIQSGFLCCGLYPFDASKINYCKLLPNLKHTEDNHISTSEHAEKFKHDFEARLSP*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00017274;
- 90% Identity
- iTF_01525903;
- 80% Identity
- -