Alep000065.1
Basic Information
- Insect
- Acronicta leporina
- Gene Symbol
- clz9
- Assembly
- GCA_947256265.1
- Location
- OX366519.1:672741-674153[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.4e-10 1.8e-07 31.2 0.0 3 36 13 46 11 51 0.92
Sequence Information
- Coding Sequence
- atggagccacaaaagcggagaaaagtatacagtaaaacacaactcgccgaagcaatcaaAGCAATTAATGACGGTACAAGTGTATATGAGGCATCAAAACGGTTTAATATTCCCAAAACTACATTACGAGACAAACGGGACAGGAAATATAAGAATGAAATTTGCGGAGTTCAGCCGGTTCTTTATTTAAGTGAAGAAAAACAGATTGTAGACTGGATTCACTACCTTGGCAAGATGGGATTTCCAGTTACAAAAGAACAATTATTAGAAGCAGTGGCTAAGCTAGTCCAAAACATAAATCGTCCAAACCCTTTTAAAAATGGTGTGCCTGGCAGATATTGGATTGAGAATTTTATAAAGAGACATCCAACAGTATCTAAACGCGTTGCACAAAATCTTCCTTCAAGCCGAAATCAAGTCACAGAAGCGGCTATACGTGCATGGTTCGACAGAGTGAACAATTATTTTATAACAAATAATCTGCATCATGTTTTAGAAGATCCTAGACgagtttttaactgcgacgaaactgctttctttttatgcccaaaagagaaagaagttttggtcagcagaggtagcaaacgagtgtataatcgtgttgctaatgatgaaaaagagtgcttgactgtgcttgtgaacgtttcagctgacggaaatctagcccctccaatgatactttttccgtataaacgtttgccaaaaaatcttgtgcctacattacctcgtggatggggacttggtaacacggaatcgggttggatgaacacagaagcattttatgaatatgttaccaactgcttctatccatggcttgtaacaaatgaaataccatttccagtagttttgtttttggatggtcacacatctcacatatcacttccactatcaacattctgtaaagaaaaagcaatcatcctggtagctttacttcccaactctacacatatactacagccgcttgacgtagctgttttcagaccagtcaaaggaacatggaggactgttgtgcatgaattcagaattcaaaataactatgccaagcttaaacgcactgattttgctccggcagtaaaaaaatgttttgaccaatgccttaagtctgaaaccatacagagcggatttcgattttgtggattatatccatttgatccATCTAAAATAAACTACAGTAAACTGTTGCCAAATTTAAAACATACTGAAGATATCAATCATATAACCACATCTGAATATGCAGAAAAATTTAAACATGATTTCGAGGCTAGATTGTCACCTATAACCTTACAAACTTTCAAAGATTCGGGACGCCAATGGATGGGAGATCCAACTTATAAAAAGTTATTCGAATATTGGAAGAAAATTACCCCCGAAAACGCCATAAAAAAAGAGAGAGTGGAAAAATTCTGTAGTTAG
- Protein Sequence
- MEPQKRRKVYSKTQLAEAIKAINDGTSVYEASKRFNIPKTTLRDKRDRKYKNEICGVQPVLYLSEEKQIVDWIHYLGKMGFPVTKEQLLEAVAKLVQNINRPNPFKNGVPGRYWIENFIKRHPTVSKRVAQNLPSSRNQVTEAAIRAWFDRVNNYFITNNLHHVLEDPRRVFNCDETAFFLCPKEKEVLVSRGSKRVYNRVANDEKECLTVLVNVSADGNLAPPMILFPYKRLPKNLVPTLPRGWGLGNTESGWMNTEAFYEYVTNCFYPWLVTNEIPFPVVLFLDGHTSHISLPLSTFCKEKAIILVALLPNSTHILQPLDVAVFRPVKGTWRTVVHEFRIQNNYAKLKRTDFAPAVKKCFDQCLKSETIQSGFRFCGLYPFDPSKINYSKLLPNLKHTEDINHITTSEYAEKFKHDFEARLSPITLQTFKDSGRQWMGDPTYKKLFEYWKKITPENAIKKERVEKFCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667332; iTF_00448995; iTF_01026058; iTF_00709167; iTF_00709159; iTF_00709149; iTF_01525903; iTF_00809993; iTF_00709143; iTF_00709175; iTF_00709150; iTF_00709152;
- 90% Identity
- iTF_01525903;
- 80% Identity
- -