Basic Information

Insect: Euproctis similis
Gene Symbol: rfx7.L
Assembly: GCA_905147225.1
Location: LR990103.1:10126765-10149909[+]

Transcription Factor Domain

TF Family: RFX
Domain: RFX domain
PFAM: PF02257
TF Group: Basic Domians group
Description: RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 2.7e-30 3.1e-26 92.7 0.0 3 78 127 202 125 203 0.97

2 2 3 3.5e+04 -3.7 0.0 19 36 589 606 584 610 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	2.7e-30	3.1e-26	92.7	0.0	3	78	127	202	125	203	0.97
2	2	3	3.5e+04	-3.7	0.0	19	36	589	606	584	610	0.76

Sequence Information

Coding Sequence: ATGGATAATACTAGTTCATTTCAACCTTGGACCCCCGAAGACAGTGCTAAAAATCGAACTGCATCTTACAATAAAGAAAGTGTCGCTATTCCAAGCAACACTTCAGGGTCGTCGGGCGCATCGACGTCCGGCGGCCAGGCCGTTCGGGCGACCAGCGAGTCCAAGATGGACTCCAGTAAAATAACTTCTATGCAGCAAATCGTTGAGAACACTCTCAGtcAAGAGGGTCGACAAAGAGTAATACAGCTTCTAGATGCTGTAGAAGCATTGAGCGGAGCTGAGAGACTACTTCTATACTTAAGACTGCCTACTGGAGTGCCTCAGCATGATCCCCTCAAACAACCAATTAATCCACTTGGTTATAGGGCCGAACTTCAACAGACTGTAACCTGGATACAGACACATTTAGAAGTAGACCCAGATGTATCATTACCTAAACAGGATGTTTATGATGAATACATAGCACATTGCATGAGTAGTAATATGAAGCCCCTGTCAACTGTGGACTTTGGTAAGGTGATGAAACAAGTGTACCCGACTGTGCGGCCGCGACAACTCGGCACACGCGGAAACAACAGATACTGTTACGCCGGTTTGAGAAGGAAAATAAAATTGGAAGTGCCACAGTTGCCGGATTTAGGTGAATCGTCTAAGGAAACAACTGCACCAACGAGGGAGACAGACAGAATTGTGTGCGAATGGACAGAGACTAAACTGGGTGTGAAATTTTCGTCTATATCGGATTTGTCGCGAGACTTGATGTCAGCCACAGTACAACAGCTGGCACCGCCTGGACCTGCCAGCGGATCACCACCTCCGTTAACGCAGCCACACGGTTTCACGTCAATATCGAAGTTTACGAGGCACGTGAGCGAACGTTCGCACGCGGGCGAACGTTCGTTCCCCTGCAAGCACTGTGACAAGAGCTTCCTCAAGTCACACCACTACACAAGGCATCTTCGTGTGAAGCATAGAAATGTGAATCGTACAAGTCGCGGTCCGTTCGATTCACACATGGAGACATACCGGTGTGAGCAATGCGAGGACACCTTCATGACTCAAGACGAGCTCATATATCACTCGGCGATCCACGCCACGCAGAACCTGATCTGCCCACTCTGTCAGGTGAAGTTTGAAGATGTGGACGCGGTCACTGCACATATCAAGTCGCACGTTAACGGTACCGAGATCATGTGTGACCTATGCGAGCTGGCGTTCACATCCAAAGAGAAACTTGATAGTCACATGGAACAAGCGCACAGCGATGAAGTTGGGAATGAGGATCATGACCAAGATGAATCTGAGATGGAAGTAGACGAGGAGGAAGACGATGCCAGCATCAAAGtcaAGGAAGAGAGTGATCACTTAGTTGTTGAAATAGAGAAGACTAACGGTTTCATTCTACCAAACTTCGAGAATGATACAGAAGAGAAGAATGACAATACTAATTGTGAAGAGAGTGAACCTGAAATATACAATGATCTACTCACCGAGGACATCAGCATGACCATTAAGGTTGAGAAGGTGGTTCCTGAAAATATTGTAGCTGAAAGACCGATTGAGGCTACTGTTACTGAAATCATTCCAGTATCTACCAATAACACAGAAAATCAGGGCCCTCCGATTTTGAGGAAAGCAGAGGAAGTAAAACGGAAGGCGCTATCCGTTTCGGAACCCGCGCCTGAGAAGAAGATAGTTAAACCCGAGAGCAACAACACTGGAGCTAGTGACAAGTCATTGAGACTGTTAGAGAAAGAACTGCACGAACTTAAAAGAACTAACATCCGCAATGAGTATGTGAAATCTACTGCAAAGCTGGGGGAGACGCCGAGACACAAGCGAATTCCTGTACACACATCGACACCTAAGATCAGATCTACTGCAGCGGAAGAAAAGAAAGTCGTCTTACCAAACAAATCACCAATTAAGTTCGAGAAGAAAGTGTTAGAAAAGCGGATAGGGACTAAAGAGAATAAAGAGCCCAAACACCTAAAAGAGACAAAAACTAATAATGTTCCactaaaagaagaaaaagaagttAAAGAGAGAGATATTAAAGAGAAGGATACACCCAAAAACGAGGTGAAAGTGCGCAGGTTGAGTGTGAAGCTGACGCCCAAACAGCGCGCGGCAGGTTCCTCCCCCGCACCCTCCCCCGGCCCCGCCGGCGCCAGCAGCACGCCCGCGGCCGCGCCCCGGAAGAGAGGACGACCGCGGAAAGCTGCCTTCAAGTCACGCCAACCTGCTAAAGTAAAGAAGAATGATGCGCAAAATGTACAACCTTCAGCTGAAACTGATCAGACCAAGAAAACTACTACAAATAATATTGTTCGAGAGAACGAGGCAACACCTGAAGCAAACATTCCAACCGGAGTATTTGTCTCACCCACAGGGCAAACACTAAAAAAAattccAGTCAAAGCGTTACCGCCAGGAATAACTCCAATACCTTTACCAAGGAATGCTAGACCTATCGGTGCCAGCGAGCTATGTAAGATGCAGTTTGGCAAAAAACTGGTGAATGTACAGAAGATTGTTATGACGAAAGCTGAAGTTGAGGCTATGACTAAAAAGGGACTTGTACATATGAAGGACGGCACAATGGTACTGAAGGTAAAACTGAaggATAGAATAAAAGAATCTCCCAAAAAGGAAAAAGCAACGCCCACTAGATGTGACATTGATGATGACGCATAG
Protein Sequence: MDNTSSFQPWTPEDSAKNRTASYNKESVAIPSNTSGSSGASTSGGQAVRATSESKMDSSKITSMQQIVENTLSQEGRQRVIQLLDAVEALSGAERLLLYLRLPTGVPQHDPLKQPINPLGYRAELQQTVTWIQTHLEVDPDVSLPKQDVYDEYIAHCMSSNMKPLSTVDFGKVMKQVYPTVRPRQLGTRGNNRYCYAGLRRKIKLEVPQLPDLGESSKETTAPTRETDRIVCEWTETKLGVKFSSISDLSRDLMSATVQQLAPPGPASGSPPPLTQPHGFTSISKFTRHVSERSHAGERSFPCKHCDKSFLKSHHYTRHLRVKHRNVNRTSRGPFDSHMETYRCEQCEDTFMTQDELIYHSAIHATQNLICPLCQVKFEDVDAVTAHIKSHVNGTEIMCDLCELAFTSKEKLDSHMEQAHSDEVGNEDHDQDESEMEVDEEEDDASIKVKEESDHLVVEIEKTNGFILPNFENDTEEKNDNTNCEESEPEIYNDLLTEDISMTIKVEKVVPENIVAERPIEATVTEIIPVSTNNTENQGPPILRKAEEVKRKALSVSEPAPEKKIVKPESNNTGASDKSLRLLEKELHELKRTNIRNEYVKSTAKLGETPRHKRIPVHTSTPKIRSTAAEEKKVVLPNKSPIKFEKKVLEKRIGTKENKEPKHLKETKTNNVPLKEEKEVKERDIKEKDTPKNEVKVRRLSVKLTPKQRAAGSSPAPSPGPAGASSTPAAAPRKRGRPRKAAFKSRQPAKVKKNDAQNVQPSAETDQTKKTTTNNIVRENEATPEANIPTGVFVSPTGQTLKKIPVKALPPGITPIPLPRNARPIGASELCKMQFGKKLVNVQKIVMTKAEVEAMTKKGLVHMKDGTMVLKVKLKDRIKESPKKEKATPTRCDIDDDA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00709798;
90% Identity: iTF_00709798;
80% Identity: iTF_00709798;