Basic Information

Insect: Eupristina verticillata
Gene Symbol: -
Assembly: None
Location: GWHALOE00000689:4092093-4095795[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00018 0.013 15.4 1.8 1 23 241 263 241 263 0.97

2 11 0.0061 0.44 10.6 0.2 1 23 271 294 271 294 0.93

3 11 0.018 1.3 9.1 4.2 1 23 342 364 342 364 0.98

4 11 3.1e-05 0.0023 17.8 0.4 2 23 478 499 477 499 0.97

5 11 4.9e-06 0.00036 20.3 2.7 1 23 504 527 504 527 0.96

6 11 1.3e-05 0.00095 18.9 0.1 1 23 560 582 560 582 0.98

7 11 4.7e-07 3.4e-05 23.5 0.8 1 23 592 614 592 614 0.96

8 11 1.7e-06 0.00012 21.7 1.2 1 23 620 642 620 642 0.99

9 11 8.7e-06 0.00063 19.5 0.2 1 23 648 670 648 670 0.98

10 11 4.5e-06 0.00032 20.4 2.6 1 23 676 698 676 698 0.98

11 11 0.0014 0.1 12.5 0.2 1 21 704 724 704 725 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00018	0.013	15.4	1.8	1	23	241	263	241	263	0.97
2	11	0.0061	0.44	10.6	0.2	1	23	271	294	271	294	0.93
3	11	0.018	1.3	9.1	4.2	1	23	342	364	342	364	0.98
4	11	3.1e-05	0.0023	17.8	0.4	2	23	478	499	477	499	0.97
5	11	4.9e-06	0.00036	20.3	2.7	1	23	504	527	504	527	0.96
6	11	1.3e-05	0.00095	18.9	0.1	1	23	560	582	560	582	0.98
7	11	4.7e-07	3.4e-05	23.5	0.8	1	23	592	614	592	614	0.96
8	11	1.7e-06	0.00012	21.7	1.2	1	23	620	642	620	642	0.99
9	11	8.7e-06	0.00063	19.5	0.2	1	23	648	670	648	670	0.98
10	11	4.5e-06	0.00032	20.4	2.6	1	23	676	698	676	698	0.98
11	11	0.0014	0.1	12.5	0.2	1	21	704	724	704	725	0.94

Sequence Information

Coding Sequence: ATGATCGGAGCGGAGGTCGCGGGCGTCCTCGAGACCTGCCGGCTCTGCGTCAAGAGGTGCGGGATCGAGACCCAGCACTGGGGCCTCTTCGAGAACGACCTTCCCCAGAAGCTTATGGCTTTCGCCGCCGTACAGATTCAGAAAAATGATGGATTACCATCAATTATCTGTACCAATTGTAGGAATTTAGTCTACATGTCCTACAATTTCAAGTGCCAGGTGGAAAGAAGTGATAATGATCTTAGACAAGCTCTTCTTTTACGGCAATCAGCAGCTCATTGGCCTTCGGTGCCAATTGTGAAATCTGTTGATAATATGGATACACTAGAAAGTATGGTACCTTGTATGCAAAAAAATATCAACAATTCTTGCATGTCTATTCAACATGAACAAAGTGAAAACAATCATGAACAATTTATTTTTGATATTGACAATAGTTGTAATGTAGAAAGTGAAACATGTAAAAAGGAAGAAATGGAAACTCATAATTCAGTTGAAACAGGAAATATTGCACAAGATAATAATGCTGTAGCTTTTCAAATAAACAATGCGATGGCAGAAAATGACAGGCAAAATACTCTTATAAATTTTGAGTCACATTATGATATTAAAAATGAATTGGTTTTAAAAAATGATTCTGAAAAGTTAAAACATAAACAGTGTCATGAAAATTCTAATCAAAGTGATGATGAAAAACCTTTAATATTAAGAGCTAAACGACATAAATGTAATTATTGTATAAAATCATTTGCTACCCTTTCTTTGTTAGAAAAACATTCAATGATTCACAAAAAGCATCTTGAAATTATTTATGTTTGCTATTTATGTGATGAGCAATATTCTTCAATTGATAAACTTCAAACTCATGCAATGGCTACACATGGAACAAATTTAGAAAAAGAAAAAATATTGGAAAATACTAGAATGCGAAGAATAAGTGGTTGGGGTAAAAAAATTGATGATAATGGTTATGAACAAAATACAACAATATTAGAGGATGCAGAAGAAAAAAAAAATACTAAATTTATGTGTAAATTTTGTTATAAACAATTTATTTACCACAAGCCTTTTATAGCCCACATGACAACACACCCCGAATATAATGATAAATTATTAAATGAATTGAATACAGTTCCAGTCACTAATTCTGATTCAAATATAAAAAATACTTCCAACTCACAAGGTGTGCAACAAGCTTCTAATCAAATAAACTCAGAAATAACATCTTGTACAGAAAATTTAAAAACTAGTTCTTATTCACTGCATGAAGGGTTGGTTTCGCAAACAACAAATTTAGAAATGATTTCTGAAGGACATAAATGTGTAGAAGAAAATATACCTTATAGAAATGATGTAGCTGAATCTGAGGGTGAAGATGACGAAGATGACGATGGGCAACGTGAAGATGATGATATGCCTGCAGCAAGTATACAGTGCAATCAGTGTGGCAAACTTGTTGCTACACTAAGAAATCTTAAGAGGCATCTCTTAACTCATTCTGGTCTTAAACATAAATGCTCTATATGTAATAAAGATTTTTCAAGACCTGATAAACTTCGAGAACATCAACAATTAAAACATAAGGAAGAGCTATTTGGTAAATCTGATTCAGAGAATGAATCATCGGATGAAAATAATACGTCGATTAGTCGAAAAAAGGAGAAAAGTAATAGACCTTACAAGTGTTCATTGTGTCCTAAAGCATTTGCTCAACCTCAATCATTGGCAAATCATGAAGAAAGACATAAACGAGTTCGTGATGTACAAAAACGCTATTTGTGTGAAGTATGCAGTAAATGTTTTGCTCAAAGTGGATCATTAGTTGCACACATGCGTACTCATACAGGTGTAAAGCCCTATGTATGCAATGTTTGCAGCAGAGCTTTCACTAAAAGTACGTATCTGCAACTGCATCTTAGAACACACAGTGGAGAAAAACCATACATCTGTCAGTATTGTAGTAGAGCCTTTGCTCGAGCAAATACCTTAGCACGACATATAACTATGCACACTGGAGAAGCCAAGTATCAATGCCAAATCTGTACAAAATCTTTTAGGAGATTGACATCCTTAAATGAGCACACTTATACACATACAGGTCAAAGACCTTATGCTTGCAAAATTTGTGCCAAAAGGTATAATAATGCTGGATCATTATATGCGCATACAAAAAAATGCAAAGCCATGCAAGCTGCTACTGTAAATCAAACAGATTACCCAGTTTCTTTACATCCACCTGATAATAATATAGTTGTACAAAATGATGACAATACCGCACCACAGCTTTTAATTTTTACTGAAAAGAAAATTGATGAAATGATAACAGATGAAACAATAGCATCTGAACCTCAAACATGTCAATTCATGATTGCGAATGTTCATGGTCAGAAACCAATGACCCCTAATATGCTTGAGTCATACACAATCCAAGAATCTGATATTTATAATATGAACTCAAAGCAATTTAAAACATCTTACTATGGATTGTATCAAAATATGTGA
Protein Sequence: MIGAEVAGVLETCRLCVKRCGIETQHWGLFENDLPQKLMAFAAVQIQKNDGLPSIICTNCRNLVYMSYNFKCQVERSDNDLRQALLLRQSAAHWPSVPIVKSVDNMDTLESMVPCMQKNINNSCMSIQHEQSENNHEQFIFDIDNSCNVESETCKKEEMETHNSVETGNIAQDNNAVAFQINNAMAENDRQNTLINFESHYDIKNELVLKNDSEKLKHKQCHENSNQSDDEKPLILRAKRHKCNYCIKSFATLSLLEKHSMIHKKHLEIIYVCYLCDEQYSSIDKLQTHAMATHGTNLEKEKILENTRMRRISGWGKKIDDNGYEQNTTILEDAEEKKNTKFMCKFCYKQFIYHKPFIAHMTTHPEYNDKLLNELNTVPVTNSDSNIKNTSNSQGVQQASNQINSEITSCTENLKTSSYSLHEGLVSQTTNLEMISEGHKCVEENIPYRNDVAESEGEDDEDDDGQREDDDMPAASIQCNQCGKLVATLRNLKRHLLTHSGLKHKCSICNKDFSRPDKLREHQQLKHKEELFGKSDSENESSDENNTSISRKKEKSNRPYKCSLCPKAFAQPQSLANHEERHKRVRDVQKRYLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYQCQICTKSFRRLTSLNEHTYTHTGQRPYACKICAKRYNNAGSLYAHTKKCKAMQAATVNQTDYPVSLHPPDNNIVVQNDDNTAPQLLIFTEKKIDEMITDETIASEPQTCQFMIANVHGQKPMTPNMLESYTIQESDIYNMNSKQFKTSYYGLYQNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00708096;
90% Identity: -
80% Identity: -