Ever000251.1
Basic Information
- Insect
- Eupristina verticillata
- Gene Symbol
- -
- Assembly
- None
- Location
- GWHALOE00000058:801686-812717[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.5e-13 8.4e-10 37.6 0.0 1 39 375 414 375 418 0.90 2 4 2.8e-12 6.8e-09 34.7 0.0 2 39 430 467 429 470 0.94 3 4 3.9e-19 9.5e-16 56.7 0.0 2 45 485 529 484 529 0.97 4 4 4.5e-19 1.1e-15 56.5 0.1 1 42 536 578 536 579 0.97
Sequence Information
- Coding Sequence
- GATAAATACAATTGCGCGACACTGTGGACGGGAGCGCGACTCAAGTTTGCCATCCCACTGATTTGCAAATTGATTTTGACACAAGTGCCGTGCGTTCTAACGAGATCCGTTTTAATAGGATCAGTCGAACGTGGTCCTCCTCAGTCTCCCTCAGCCTCCCTCAGCCTCCCTCAGCCTCCCTCCTCCCTGCTGAAGACGGCCGATCAACTGAAGATAAAGGGCCTCTGCGAGGTGCCGGAGAGCAGGGAGGGCCCCTCCGTGAGCCTGAGCTCCCCGCCCCGCGACTCCAGCACTCCCCGGCTTAACTTTGCCAAGATAAAGAGGCACCATCCGCGGTACAAGAGGCCCAGGACGTCTTACGAGGGCAGCCTTCGCCCCGGCCACGGGCCCACCGCAAACACGGAGCCGAGACACCACCACCACCACCACCACCTCGCCGACCCGGCCAAGTACAAGGAAGAGGACTTTGTCGAGAGCTACGTGCGAGACTGCAACAAGGAGAACCGCCGAGACTGCTGGCCGGCTGAAGATGATGATTGCATGGAGACGACAGCGACGACCACTACAGTAGTCCTGGACTCGTGCCAGCGCAGCAACAGCGTCGGCGGCGGGGGCGGTGGAGGCGGAGGTGTAGGTGTAGTAGCAAACAACAACAACAGCAGTGGTAACAATAACGCTACCGGTGCAGCGACCAATAACAACGGTGACATGTTCTGTCACACAGGCCTCGGTCACTACGCCCATCATCCAGATCCGGGGGAAGTTGATCTACCGCCCGAGACGCAACCAACGCCACCTAGTGCCACCCTCGTCGGCACCACCATAACTCACTTGCGGGATCCAGATCACCATACGGCAGACATCCAGAGCTGCGACAGCGTAAAGATTAAATTCGAAACACTGCACACGATGGACTCCTCGGACACGATCGACATCGACAGCCACATGTCCGATCGGGCGAGCGTGAGCTCAAAAAACGCCGACGACAATATGATGATGATCACACCCGAGCTCCTGGGCCTCATGCCCTCCGGGAGCTCCGTCCACTCGGACTCTGGTGAGAACAACTCTCGCAGCCATTCCGGACAGTCGGGGTCCCATCACCACGGCTCCAAGTCTTGGACACAGGAAGACATGGACGCGGCTCTCGAGGCCCTCAGGAACCACGACATGAGTCTTACCAAAGCCTCTGCGACGTTCGGCATACCCTCGACAACGCTGTGGCAACGCGCCCACCGCCTCGGCATCGACACCCCGAAGAAGGACGGGCCCACCAAGTCCTGGAGTGACGAGAGCTTGAACAACGCCCTGGACGCGCTGCGCACGGGAACAATTTCAGCGAACAAGGCTTCCAAAGCCTTCGGCATACCTTCGAGCACGCTCTACAAGATCGCGAGGCGGGAGGGCATCAGGTTGGCGGCTCCCTTCAATGCGAGTCCGACAACCTGGTCGCCGGCTGACCTTGACAGGGCGCTGGAGGCCATCAGGTCTGGTCAGACATCGGTGCAGCGTGCTTCCACCGAATTTGGTATACCTACGGGTACGCTCTACGGACGTTGCAAAAGGGAAGGCATCGAGCTTAGTAGGAGCAATCCCACCCCCTGGAGCGAGGATGCCATGACCGAAGCCCTTGAAGCAGTCAGGTTAGGACACATGAGTATAAATCAAGCGGCGATCCACTACAATCTGCCCTACTCGTCCCTTTATGGGCGCTTCAAGCGTGGAAAGTACGAGGAACCGGTTGTCAACGAGATGTCGCAGGATGGCTCCTCGCAGCACTTCCACCAGAGCCCAACTCAGAATCACTCATCCTCCCTTCCCGACCAAATGCCATACCAGGGCAGCTGA
- Protein Sequence
- DKYNCATLWTGARLKFAIPLICKLILTQVPCVLTRSVLIGSVERGPPQSPSASLSLPQPPSSLLKTADQLKIKGLCEVPESREGPSVSLSSPPRDSSTPRLNFAKIKRHHPRYKRPRTSYEGSLRPGHGPTANTEPRHHHHHHHLADPAKYKEEDFVESYVRDCNKENRRDCWPAEDDDCMETTATTTTVVLDSCQRSNSVGGGGGGGGGVGVVANNNNSSGNNNATGAATNNNGDMFCHTGLGHYAHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHTADIQSCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNADDNMMMITPELLGLMPSGSSVHSDSGENNSRSHSGQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVNEMSQDGSSQHFHQSPTQNHSSSLPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00304983;
- 90% Identity
- iTF_00463914;
- 80% Identity
- -