Ekon025387.1
Basic Information
- Insect
- Eupristina koningsbergeri
- Gene Symbol
- ZFX
- Assembly
- GCA_018907245.1
- Location
- JACCHV010000076.1:17947-25220[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.4 5.1e+02 3.3 0.1 3 23 24 44 23 44 0.94 2 14 0.00039 0.15 14.4 1.6 2 23 1074 1096 1073 1096 0.96 3 14 0.002 0.76 12.1 0.3 2 23 1109 1130 1109 1130 0.98 4 14 1.5e-05 0.0055 18.9 2.3 2 23 1133 1154 1132 1154 0.97 5 14 0.021 7.9 8.9 0.4 1 23 1160 1182 1160 1182 0.91 6 14 2e-05 0.0076 18.4 4.5 2 23 1189 1210 1188 1211 0.95 7 14 0.09 34 7.0 3.7 5 23 1224 1242 1223 1242 0.97 8 14 1.8e-05 0.0068 18.6 1.5 3 23 1249 1270 1248 1270 0.97 9 14 0.024 9 8.8 0.5 2 23 1286 1306 1285 1306 0.96 10 14 5.5e-05 0.021 17.1 0.7 1 20 1312 1331 1312 1334 0.92 11 14 6.8e-05 0.026 16.8 2.7 1 23 1342 1364 1342 1364 0.99 12 14 0.0019 0.72 12.2 3.2 1 23 1370 1392 1370 1392 0.97 13 14 3.5e-06 0.0013 20.9 3.9 1 23 1398 1420 1398 1420 0.99 14 14 0.00025 0.093 15.0 7.2 1 23 1426 1448 1426 1449 0.96
Sequence Information
- Coding Sequence
- ATGGATCTCAGTACAGCTGTAACGGCGATGTCGGTCAATGGAGGTAGTGGAGCTGGGGGAGCCGTTGCCTGCCCAGTATGTACGTTGTACCTGCGTGAAGGCATCAGCTTGCAAAAGCACTTGGACACACATCCCAAGGAGCAGGTCATCGAGGCACTCATACGAGCCAGTAGTGGTAGTGGCAGTGTCTCGACACTTCTCACTCAGGCCTGCCTGCCCCAATCGCAGCAGCCTCAGCCGACGATATCGTGTCCACCAATCAATGCTATGATACCACCGCCTCAGTTTGCTTCATTTAGCTACCAACAGTTTATTAATAATGGTACAATGATGATACCTGCGCAGTATGCAATGGCTCAAGCGCAACCTCCGCAAACCAACCAGATGATGCAAATGTTGTACAGTCCATTTGGTATGTACCATCAACAACAGATTCCCACAGTTCAGATGATCTCAGCACCACCAATGATGCCCCCTTCCTCGGCGACATTACCGACAACAGTAGCTGGAGTAACAACGCGCATAAGGCCTGCTACAACTGCTACTAATGTTACTGTCTCAGAAATCGATGTTAAGATTGATGAAAAGATAACAAGAACGTCATCACCACCTCCATTGCCACCTCCACCACCGTTGCGGCCAACAAGTTGTTCTCAGCAACAGCAACAACAACCGCAAGTTGAGCATCAGCAAATGGTTGTTGATACACCGAAGCCCCACGTAATTCAAGATATCATAATTAGTCCTGATCGTATATTGCCAGATTTAGACCTCCCAACAACACCTGAGAAGTTACACGCCGATGAAGAGGATGATCAAAATAGTGTTCACATAGAACACCCGGACCAACAGATTCAAAATACTTGTATACAAGAAGAGCAACAAAATGTTATCAAACAATATCAGAGAGAAAATTTGTCATCGTTGAATAATCCTTGCAATAATAATGCAGATGATGAAAAGACAGAAAGAATTTTACCAGATATTGAAGATAACAAAGAAATAGAATCACTGATTGTAAGAGAAACAGAAATGATTGAAACTTATAAAGAAACACGAGAGATAGAATGTATTAAACAAATACAAACTTCAACTTGTGATGAAAATAAAAAGGAAGAAAGTACAGATAGTGGTCATTCAAATACAATAGAGAATTGTGAACAGTTTAAGAATAAAACTGAAGAAATTGATTTGGAATCAAATAATATAGAACCTCATGATTTATCAACTAGTGAAACGCGTGTTTCGAGACTCCATGAGCCTGAGATAGAGCAATTAAATCGATTGCTCGTAAACATGGAGTCGGAATTAAATAATGAAGAATTAACAAAAAAAGATGAACAAGAAATTAGTGCAAGTTCTCAACAAAATATTGAGGAGGTAATACCTATTAAAAACATCGAAAAACATGAGAAGAACGAAAACATACATGTATTATACAATAAGACTAGTTCTGATTCGATCGACTGTAAAATAATTGTTGCTCACGAAGATATGGATGTGTCTTCTGTTGCTTCTGAAGATTCCATCCAATGTGATATGGAAATTGAAAAGATAATTACTTCTTCATATCAATACAAGTTTTCACAATCCATACCGTGTTTCCCTATTATAAAAAATAAGAAATATCATCGGTCTCTATCACGAGTTTCACTACGTTCTGATTTGTATCGCTCGAACGAGAATCTATGTCCCGTGGATTTTGAAGCCACCAAATTACAAGATTTTCTTAAAGATAATTATAATGATGAAGACATGGAGCTAGAAGAATTGCAGCATCATTCATTTATAAAACAAAATACTAGCAATATTGTAGAACGTATAAGATCACATACGTCTTTGTCCTCGAGTATGAACGTCGGTCTTTCTCTACTAAAATCACAACGAGACAAAGTATCTTCTTCTCCATTATCTGCGCATAGCTCTTCATCTCCATATTGCCGTATGGAAGAAGATGAAGATGACGATGAAGAAGAAGAAGATGAGGATGAGGAAGAAGATGATGAAGACACAGATGGAGAAAGTTGTATTAGTTACCATGCTATTGAAAAAGATAATGATGAAGAAATCGAGGAAGATCTCGTAATCGAGAAAAAGGAAAAACATGATAAAAAGGAACTTGTTCTTGATGATTCTAAGGACAAAGTAACTACTGAAATTTTACAACTTGAAGAACAGTCTACAGATTTCAAATCTCAGAATTTAATTTCTGATCTATACTCTACTGGGCATTTTCCACTCGATCATGTTTCAACTCAACACCAGCAGGGACCCTCTATTTCAATTCATCATGAAACTTTTCCATTGTCTAGTAATGATCTTTCACAAAATATTTTGAATATTTCTGAATGTCGTCACCCAGCAACTAGTACAGACTCGAAAAGTTATTCTAGTTCGAATAAGTCATCAATACAAAAGCCGACAACAGAGCTTCTGAACATTAATGAAGATGCTCACGCAGGTCCGATAAACGTCCTGGAATATGATGGTCTACAGGTTCTAGTACCTAGTACATTTATTAGCGAGTCTTCGCAAAAGGCCGTAAGTGGTACGAGTCAGCAATCAATGTCAAGCAGTGAAAATGGAGCAGGAAATGACGAGGAAGTTAAAAGTGTAAACATGAGAGCAGATGAAACGATGCCTCCGAGAGGAGAACTTTCGGAACAGGAAAGTAATGGTTGCACTGAACAGTCAACCTGGCAGTCGTACATGGGTCAGGAGTTGTCACGTATGTCGACATCTTATGATTTGATGGCGCGTGAGAGTTGGGAAGAATCCGAGGGATCGGAACACGAAGATAATAATGTAGGTCCTCTTCTCGACAGTCGTTCTCTTGCAACCCACTTTACTTCAAGTCTTTTCCTTGATCGTGATCGCAAAACACCTCCAGGTCGTCGGATTTTTAAATGTTCGCTTTGTGCCGAGGTGTTCGATTGCCCGAAAGAGCGACGCGTTCACAGTACGATGGTGCATAAAGAGGCTGGACCTTCGGGCTGTGGTGTCGATAACGTGGATCAATCGGAACTAAAAGATATTAAACTGTTGGATGGTCGTGCAGGTGCATTTGAAGATATGTTCGTACCAAATGCTTTACATGCGTACCAAGTACATCAGCAACCCTTGCTTCACCAACTTCAACCAGTTCAGCACTCGAGTTCTGCCAAGGTTGAGATTGATACAAAACTGGATCCTCTTCACCTATCAGTAACGAATGAAGTCATGTGTGGTCTTTGTAATCAGCGCTTCAGCAGTGAAAAATCATTGCAAATCCATCATAGACGTGTGCATGTTACTGAACCAACAAAGCGCATCCGTGAAAATGCTAAGTGTCAAATTTGTAGCGAAGAATTTACTTCAGTTGCGAGCTTCAATCTTCATCTTAAAATACACCCCCTTGAGTGTGGTCAGTGCGGCAAGTATTTCTACCGCAAGCAAAATTTCAAACTCCACATGAAACGTCATCTAGGAATAAAACCTTTCCCTTGCACTATTTGTGATAAGGCCTTTCTTACTAAGCAAAAACTAGATGAGCACAATAATGGGCATACAGGGAATGCCCCTGTCAAGTGTAATTTATGTAACGAGACTTTCAGACGTTATTCGAATCTCACGCAGCATAAAAATCGGCATCATCTGAACATCAAGAAGAAATTGAAAGACTACATATGCCATTGTGGTGAAGTTTTTCATACAAAAAAGAAACTTGCTTGGCATAAAGAAACACACGATGAAAAGCCAAAAGCTTGCACCTATTGTAACGAGCGATTCATACACATGGCAAGCTTAACGCGGCACATGCGCCGTGCTCACAATAGAAGATTCGTGCCCGATGCTCAAAGAGACAGCGAAAATGTCGAGTGTTCAATTTGTAAGTGCATTTATCTCAGATCCTCGCTAGCAGTTCATATGCGTGTCCACAATGGGGAAAGGCCTTACGAATGTCAAGTATGTTCTAAAGCTTTTAGTACTAAGTGGAACTTGCAGTTGCACAAGTGGACTCATGCCGCCCGTAGCACAAAACCTTTCAAGTGCAACCAGTGCAGTGCAGCCTTTTACAGACACAGTGACTACACAGCACACATGAATTCCCACAGGAACGTCAGACCATACACCTGCAATTATTGTGGAGCCCAATTCATTAGGAAGTACAACTGTTTGCGGCACGTCAAGGAACATGAAGAAAATAAAGCGTATACTTGTGACGTGTGCAATAAAACATTTCATAGGTCGTATTATCTGAAGGAGCATTTAAGAGTACACTCCGGAGCAAGACCTTATACTTGTCATATTTGTGGCAAGTCCAGCAGCACAAAGTCTAATCATAATAAACACGTTCGGATTCATCATGCGCGCGAGCCTGTAAATACAGAAAATTAA
- Protein Sequence
- MDLSTAVTAMSVNGGSGAGGAVACPVCTLYLREGISLQKHLDTHPKEQVIEALIRASSGSGSVSTLLTQACLPQSQQPQPTISCPPINAMIPPPQFASFSYQQFINNGTMMIPAQYAMAQAQPPQTNQMMQMLYSPFGMYHQQQIPTVQMISAPPMMPPSSATLPTTVAGVTTRIRPATTATNVTVSEIDVKIDEKITRTSSPPPLPPPPPLRPTSCSQQQQQQPQVEHQQMVVDTPKPHVIQDIIISPDRILPDLDLPTTPEKLHADEEDDQNSVHIEHPDQQIQNTCIQEEQQNVIKQYQRENLSSLNNPCNNNADDEKTERILPDIEDNKEIESLIVRETEMIETYKETREIECIKQIQTSTCDENKKEESTDSGHSNTIENCEQFKNKTEEIDLESNNIEPHDLSTSETRVSRLHEPEIEQLNRLLVNMESELNNEELTKKDEQEISASSQQNIEEVIPIKNIEKHEKNENIHVLYNKTSSDSIDCKIIVAHEDMDVSSVASEDSIQCDMEIEKIITSSYQYKFSQSIPCFPIIKNKKYHRSLSRVSLRSDLYRSNENLCPVDFEATKLQDFLKDNYNDEDMELEELQHHSFIKQNTSNIVERIRSHTSLSSSMNVGLSLLKSQRDKVSSSPLSAHSSSSPYCRMEEDEDDDEEEEDEDEEEDDEDTDGESCISYHAIEKDNDEEIEEDLVIEKKEKHDKKELVLDDSKDKVTTEILQLEEQSTDFKSQNLISDLYSTGHFPLDHVSTQHQQGPSISIHHETFPLSSNDLSQNILNISECRHPATSTDSKSYSSSNKSSIQKPTTELLNINEDAHAGPINVLEYDGLQVLVPSTFISESSQKAVSGTSQQSMSSSENGAGNDEEVKSVNMRADETMPPRGELSEQESNGCTEQSTWQSYMGQELSRMSTSYDLMARESWEESEGSEHEDNNVGPLLDSRSLATHFTSSLFLDRDRKTPPGRRIFKCSLCAEVFDCPKERRVHSTMVHKEAGPSGCGVDNVDQSELKDIKLLDGRAGAFEDMFVPNALHAYQVHQQPLLHQLQPVQHSSSAKVEIDTKLDPLHLSVTNEVMCGLCNQRFSSEKSLQIHHRRVHVTEPTKRIRENAKCQICSEEFTSVASFNLHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTICDKAFLTKQKLDEHNNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRDSENVECSICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01219241;
- 90% Identity
- -
- 80% Identity
- -