Ekon027351.1
Basic Information
- Insect
- Eupristina koningsbergeri
- Gene Symbol
- -
- Assembly
- GCA_018907245.1
- Location
- JACCHV010000105.1:1608684-1619660[-]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.9e-17 8.1e-13 49.6 0.3 7 72 215 277 212 279 0.91 2 2 0.48 7.8e+03 -1.6 0.1 44 72 660 687 659 690 0.83
Sequence Information
- Coding Sequence
- ATGAGTGAAGATTTTAAATCTACCCCAAAACGAAAAATATTATATCCTGTGCAGAAGAAACTAAACTTACAATACGAAAATAATTTATGTATAAAAAATTTGATTTTATGCAATGAAGACATGTTTAATTCTGACGTGTCTTCAAAAAAAAGCATGGAAAATACTACATTTGAAAAAATGAAAAATTCTACTGAAAAGCAAACTACGGAAGAACAAGGGCTTTCACGACTTACAATAGAAAAACATGCTAAAAATGCAAAAGTTTTAAATAATGTAGAAGATAAAACTATACTTAAAAAGGGAAAAAAACATTACACTAGATTTTCGATAAGAAACAATGTACTGTTGGAAGAAAATAAAATGCTTATTCAAAATGAAAAACTTCCAAAGAAAGATTGCACTCTGAATAATGTTAAAAATAACGAAATTCATATGAAAGTAAATGAAGAAAACATATTTCCAGTTAAAAGAAAAAGAGGCAGGCCTAGAAAGATACAAAATTTAAATACAGAAAATTTGGCCAAACGACAAATGATTAAAGACTGTATTAGAAGAAATAAAGAAAATGATTGCACATTTATACCAAATTCTCCCAAGAGACTAAGAAAAAAACAATATTGCACAAATTTCTACGATTCTAAGTTTCATGAACCATTCAAATACGGTTGGAGGCGTGAAGTAGTGTACCGAACAATTCAAAAACTTGCAAAAGCAGATGTGTATTACTATACACCTTTCGGAAGAAAACTGAGAAGTTTCGTTGACATTAAAAAAAGACTTGAAAACAGTGGAGAAAATTTAACTGTAGAAAATTTTACCTTTTATAAAGGATCAATTGGTATCAACGATTTAAGTAAAGAAATAATTCGAAATTCAAATTCTTTAACAATGAAACAACAAATTAAAAAGCATTTATTAAGAATTGTTAACCCAAATAAAGTTATTTCAAATGAGAATAATTTATCTATTTCCAAAACAAAGAGAAATAAATATCATGATCTTGATTATTGGAAGGATGAATCAGAACTACCTCCGTCCACTGATGACTTAAAGGATATTCATAAAATAAATGAATTTAATAGGGTTGATAGGGATGCATCACCAGAAAGTCACGTTTATCAAGTACGTATGTCGAGTAGTTTACAAGATAATCTTGATAATTTTATTGAAGACAATACTGAAATATTAAATACTACAAAAATTATTATTTCACCAACTTCATTTAACAAAAATCATGTTGATAATCAAAGGAATGACAAAAATATTTCAAAAATAAATACGATAAAAACAATTGAATCTTTGTCTTATAAGGACATTGACTTACAAACTAAAAATCTATTATCTACAAGTGAAAATACGATCGATTCACTTACAAATAAAAAAAATTTTAATACCCATGAAAGTGTTTCAAATATTGCAACAGCAAGTAAAGATGAAAAAACTACATTAATAAAGTGCGATATTAATGAAATCACTGAATCAAATAATTTAAATAATAATTTTCTTGTTACAAGTATTATAGATGATTCTGCAAAAAAAATTGAATCATTGCCAGATGTTTTACATGTTCAAAGTTCGTCGACTTATTCAGGCATTTTCACGTCTACAACAGAAATTTCTGAAAAATGCATTTCCCCAAAAATTGATATTATTGATACAAATATTAATATATCTGAAGGAAATGAAGTTCTTGCACATAATATTTTATTTGAAGAAAATCCTTTATTCGGACGAGATAGTTTAAAAATGACAACGAAATCTCCAGAAAATCATTTTTATAATTTTCATCTCATTACAAAGAATCTAGTACAGAAAACATTAGACAAAGTGGAATGTGTTACCAAAACTGTCGAAAAACAAAGTTGTTTTAAGGAAGATATTTTACCTTTAAATATTGAACATTTAACAGAAAAAGATACAAATAACATTAAAAGAATACAAAATTGTAGTTTGGATAATGGTTTTTCTTCGGTACATAGTTCATTAAAAAATATCAATTGTTCTTTGGAATCAAAAATTGAAACAAATAATTCACTTAGAAACTTTGATTTAAATCATAAAGTATCCCAAATTAATGTTAGATTTAATTCACAAACTTCTTTTCAACATATACATTTATCTTATCAACCTATTGTATTACTTCAAAATATATTAGATTATAAAAATCCTAAAAATGACGATTTTAAAATAAATTCTATTATATCGTCGGGAAAGAAAAACAACTTATCAAAAGTGAATTATTCAAAAAAAAAAATTAAATTTAATGAAGTAGAGACTAATATGTATCCCTATTCTATGGCAACATTTTTTGCTGGTTATAATGTACTTAAATTAATTTTCTCGTATCTTAATATTGAAGATCTATTAATTGCTCGAAGAGTCTGTACAGTCTGGAAGGAACTTGCTGATCAACCAATATTATGGAAAAAAGTAACAATAAATAATAGTCAAATGACGTTAGCTTTAGCTAATATTTTACAAAAACGGGAAACTGAACATTTATTGGTTCTCAAAGAAGATGATAATAATTGGGAAAGCTTTCTTAATGCTGTACCAAAAATTAAAAGTCTTCAAAAACTTGAATTATGTTCCTGTACAGCCGTTATTTTTGAAATTATCATTAGAAATTGCCCACAATTACAAATAATTAAAGTATTGATCAAATCTGAAACTCTTAATCTAGAATCTGTAAGAAATTTAGACAATCTTAAAAAGTTACATCTGAAAGCTGTGAGCAAAGTGTCATTACAAAGTGATCTCACAAATCTATCAAGGCATCAAAATTTAACTGATTTGAGCCTAAGATGTATTAAAAATTTAAGCAAAAGAAATATTGAAGCAATACGATTTTTAACAAACTTAAAAAATTTAGAATTGGGTGAATGTTTGGGATTCAATAAGTTAGGTTCAATTGTTCTCATTAAACTAATAAATTTAAAACGCTTAAGGTTAGAAACAATAAAAGATTCACAATGCTGTATTGATATTCTAATAAATATTTCGAAATTGACGAAATTAACTGATTTGGAATTGATCAATGTTAGCATATCAACTGAATTTAACAAATACTTACCAAAATGTCAGAATATTGTAAAGCTGGTACTTATTCCTATATATGAAGGTCAATCAGCATTATTCAATAATATTATTGTAAAAAGTACATCTAAATTAAGAAGTAATTTAAAACAATTTATTTGGGGTATTCCTGAAGAAAATTTTGAATTCTCCAAGTTGTTCTTTGATCATTCAGAAGATATTTGGATACTATTTGTAAAACCAATTCCTCATTTTCACCTTATAGAAAATATGATAAATATAGATAAACATAATTTTTGCAAAAAACAAATAGCAATAATTACAAAAATTTTCGCAAATGTTTTGGAAAAAGATCAAAATATACTAGTGAATACACTAAAATTAGATATGTTATCAGTATCTAATTTACAAATGCTTTATTCTATTATTCTTCCAAACACAAAATTAGAAATCTTAAAAGTGAGGTTCACGCGAGTGGCGGCGACCGAAAAATGGAAAGCTATTTCTACTGAAATTGATCCATCTTTAGGATCTGAGTATTTTCTCCAGGTCCAAGAATTCACCAGACTCATCATCAGAATGACGACCAAAGTTGTTTCCACTAAGATCTTGTATGAGACTGTGGACTGCTCCACGGGATTCACCGCGTCGTTGATCTTATCACTGGCTGTCGTACAATGTGACTTGGATCCATATCACATCATCCCGCGATTGCTCCGTCCCAGCCTCCGGGACGCACATTACCAATCCGGTCACTTCCAACTCGAACTGACAGGTCGGCTGGGAATTGCATTAGAGCTCATGTTTCTTTTGGCTACCATTGAATCATCGGTAATCTTCATTAGAAGCTTATTTTTCTTGAGATTACTTATTATTGCCTGGCAATAA
- Protein Sequence
- MSEDFKSTPKRKILYPVQKKLNLQYENNLCIKNLILCNEDMFNSDVSSKKSMENTTFEKMKNSTEKQTTEEQGLSRLTIEKHAKNAKVLNNVEDKTILKKGKKHYTRFSIRNNVLLEENKMLIQNEKLPKKDCTLNNVKNNEIHMKVNEENIFPVKRKRGRPRKIQNLNTENLAKRQMIKDCIRRNKENDCTFIPNSPKRLRKKQYCTNFYDSKFHEPFKYGWRREVVYRTIQKLAKADVYYYTPFGRKLRSFVDIKKRLENSGENLTVENFTFYKGSIGINDLSKEIIRNSNSLTMKQQIKKHLLRIVNPNKVISNENNLSISKTKRNKYHDLDYWKDESELPPSTDDLKDIHKINEFNRVDRDASPESHVYQVRMSSSLQDNLDNFIEDNTEILNTTKIIISPTSFNKNHVDNQRNDKNISKINTIKTIESLSYKDIDLQTKNLLSTSENTIDSLTNKKNFNTHESVSNIATASKDEKTTLIKCDINEITESNNLNNNFLVTSIIDDSAKKIESLPDVLHVQSSSTYSGIFTSTTEISEKCISPKIDIIDTNINISEGNEVLAHNILFEENPLFGRDSLKMTTKSPENHFYNFHLITKNLVQKTLDKVECVTKTVEKQSCFKEDILPLNIEHLTEKDTNNIKRIQNCSLDNGFSSVHSSLKNINCSLESKIETNNSLRNFDLNHKVSQINVRFNSQTSFQHIHLSYQPIVLLQNILDYKNPKNDDFKINSIISSGKKNNLSKVNYSKKKIKFNEVETNMYPYSMATFFAGYNVLKLIFSYLNIEDLLIARRVCTVWKELADQPILWKKVTINNSQMTLALANILQKRETEHLLVLKEDDNNWESFLNAVPKIKSLQKLELCSCTAVIFEIIIRNCPQLQIIKVLIKSETLNLESVRNLDNLKKLHLKAVSKVSLQSDLTNLSRHQNLTDLSLRCIKNLSKRNIEAIRFLTNLKNLELGECLGFNKLGSIVLIKLINLKRLRLETIKDSQCCIDILINISKLTKLTDLELINVSISTEFNKYLPKCQNIVKLVLIPIYEGQSALFNNIIVKSTSKLRSNLKQFIWGIPEENFEFSKLFFDHSEDIWILFVKPIPHFHLIENMINIDKHNFCKKQIAIITKIFANVLEKDQNILVNTLKLDMLSVSNLQMLYSIILPNTKLEILKVRFTRVAATEKWKAISTEIDPSLGSEYFLQVQEFTRLIIRMTTKVVSTKILYETVDCSTGFTASLILSLAVVQCDLDPYHIIPRLLRPSLRDAHYQSGHFQLELTGRLGIALELMFLLATIESSVIFIRSLFFLRLLIIAWQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -